chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 90675341 90675342 T C 40 GENIC homozygous 55546251 5 90676737 90676738 T TA 10 GENIC homozygous 55546255 5 90681119 90681120 C CCA 20 GENIC homozygous 56037435 5 90687929 90687930 C A 18 GENIC homozygous 56037447 5 90688555 90688556 A - 2 GENIC homozygous 55546308 5 90688606 90688607 T G 4 GENIC homozygous 55546310 5 90688723 90688724 T G 4 GENIC homozygous 55888342 5 90688724 90688725 C G 4 GENIC homozygous 55888343 5 90688725 90688726 T A 4 GENIC homozygous 55888344 5 90688979 90688980 C A 5 GENIC homozygous 55546314 5 90690094 90690095 C T 12 GENIC homozygous 55546322 5 90690914 90690915 T C 20 GENIC homozygous 55546324 5 90691331 90691332 T - 7 GENIC homozygous 56167152 5 90691753 90691754 C A 16 GENIC homozygous 55546326 5 90691898 90691899 G A 21 GENIC homozygous 55546328 5 90692322 90692323 A AAAG 3 GENIC homozygous 55546332 5 90694268 90694269 G A 10 GENIC homozygous 55546336 5 90694445 90694446 T TA 16 GENIC homozygous 55546338 5 90696011 90696012 C T 27 GENIC homozygous 56037454 5 90696425 90696426 T C 18 GENIC homozygous 55546346 5 90696652 90696653 A G 18 GENIC homozygous 55546348 5 90697270 90697271 A AT 9 GENIC homozygous 56037455 5 90697593 90697594 G A 10 GENIC homozygous 55546354 5 90698982 90698983 T C 22 GENIC homozygous 55546358 5 90699534 90699535 C T 4 GENIC homozygous 55546362 5 90699600 90699602 TT -- 4 GENIC heterozygous 56037457 5 90699601 90699602 T - 4 GENIC heterozygous 56572993 5 90699741 90699742 A - 11 GENIC homozygous 55546364 5 90702081 90702082 C G 24 GENIC homozygous 55546376 5 90702425 90702426 A G 8 GENIC homozygous 56167154 5 90702459 90702460 A AT 7 GENIC homozygous 55546378 5 90702621 90702622 T C 13 GENIC homozygous 55546380 5 90702875 90702876 T G 11 GENIC homozygous 56037458 5 90703313 90703314 C T 19 GENIC homozygous 55546382 5 90704007 90704017 AAACTAAACT ---------- 7 GENIC homozygous 56037459 5 90705816 90705817 T C 16 GENIC homozygous 55546394 5 90706174 90706175 C A 2 GENIC homozygous 55546396 5 90706743 90706744 C T 5 GENIC homozygous 56167156 5 90707308 90707309 T C 15 GENIC homozygous 56167158 5 90707849 90707850 C T 24 GENIC homozygous 56167160 5 90708144 90708145 T G 40 GENIC homozygous 56037461 5 90708243 90708244 A C 26 GENIC homozygous 55546406 5 90708639 90708640 C T 27 GENIC homozygous 56037462 5 90709420 90709421 G GA 12 GENIC homozygous 55546408 5 90710012 90710013 C CGTT 11 GENIC homozygous 55546411 5 90710209 90710210 C T 19 GENIC homozygous 56037464 5 90710500 90710501 C CT 10 GENIC homozygous 55546413 5 90710791 90710792 G A 3 GENIC homozygous 55546415 5 90711493 90711494 C A 11 GENIC homozygous 55546427 5 90711674 90711675 C T 21 GENIC homozygous 56037466 5 90711851 90711852 A ATT 3 GENIC homozygous 56037467 5 90712345 90712346 G T 13 GENIC homozygous 55546437 5 90713436 90713437 T G 14 GENIC homozygous 55546441 5 90714041 90714042 C T 5 GENIC homozygous 55546443 5 90714580 90714581 C A 10 GENIC homozygous 55546445 5 90714768 90714769 C CCTCCCAAGTGATAAAATCAAA 22 GENIC homozygous 56433151 5 90714879 90714880 G A 29 GENIC homozygous 56037468 5 90715131 90715132 T C 14 GENIC homozygous 55546449 5 90715489 90715490 T A 10 GENIC homozygous 55546451 5 90716157 90716158 T C 23 GENIC homozygous 55546453 5 90718588 90718589 A AGGCT 8 GENIC homozygous 55546459 5 90718944 90718945 A AAAC 7 GENIC homozygous 55546461 5 90719757 90719758 T TAAACAAAC 14 GENIC possibly homozygous 55546465 5 90719757 90719758 T TAAACAAACAAAC 14 GENIC heterozygous 56433153 5 90720236 90720237 G A 14 GENIC homozygous 56037470 5 90720351 90720352 T C 13 GENIC homozygous 56037471 5 90720393 90720394 A C 10 GENIC homozygous 56037472 5 90720660 90720668 GTGTGTGT -------- 16 GENIC heterozygous 56433155 5 90720662 90720668 GTGTGT ------ 16 GENIC possibly homozygous 56433157 5 90720705 90720706 T C 20 GENIC homozygous 56037475 5 90720712 90720714 GC -- 18 GENIC homozygous 55546467 5 90720731 90720732 T C 19 GENIC homozygous 56037476 5 90720756 90720757 A G 14 GENIC homozygous 55546473 5 90721281 90721282 T TG 15 GENIC homozygous 55546475 5 90721443 90721444 T G 14 GENIC homozygous 55546481 5 90721933 90721934 A G 19 GENIC homozygous 55546483 5 90722058 90722059 G A 15 GENIC homozygous 56037477 5 90722180 90722181 C G 21 GENIC homozygous 56037478 5 90722940 90722941 C G 22 GENIC homozygous 55546489 5 90723002 90723003 C G 16 GENIC homozygous 55546491 5 90723008 90723009 T C 16 GENIC homozygous 55546493 5 90723252 90723253 A G 11 GENIC homozygous 55546495 5 90723497 90723498 T TCAAAACAAAA 6 GENIC homozygous 55546497 5 90724512 90724513 C CACA 10 GENIC homozygous 55546503 5 90724656 90724657 C CT 6 GENIC homozygous 55546505 5 90724703 90724704 C CATGCTAG 4 GENIC homozygous 56433159 5 90724707 90724708 A AGCGCTCTAC 4 GENIC homozygous 56433161 5 90724709 90724710 A AC 4 GENIC homozygous 56433163 5 90724713 90724716 ACG --- 4 GENIC homozygous 56433165 5 90724742 90724743 G GAAATCCCCAA 5 GENIC homozygous 56433167 5 90725065 90725066 C G 12 GENIC homozygous 55546507 5 90725632 90725633 A - 8 GENIC homozygous 55546509 5 90726430 90726431 T C 11 GENIC homozygous 55546511 5 90726491 90726492 T A 12 GENIC homozygous 56167166 5 90726522 90726523 T C 15 GENIC homozygous 56167168 5 90726726 90726727 T C 12 GENIC homozygous 55546513 5 90727188 90727189 A G 33 GENIC homozygous 56037479 5 90728032 90728033 T A 12 GENIC homozygous 55546515 5 90729670 90729672 CC -- 7 GENIC homozygous 55546517 5 90729686 90729690 TCCC ---- 13 GENIC homozygous 56037480 5 90729762 90729763 G A 23 GENIC homozygous 55546521 5 90730281 90730282 A - 12 GENIC homozygous 55546523 5 90730644 90730654 TTTTGTTTTG ---------- 8 GENIC homozygous 55546525 5 90731159 90731160 G A 22 GENIC homozygous 55546527 5 90731355 90731356 A G 12 GENIC homozygous 55546529 5 90731995 90731996 A T 8 GENIC homozygous 55546531 5 90733922 90733923 T A 9 GENIC homozygous 55546533 5 90734018 90734019 A AC 13 GENIC homozygous 55546535 5 90734039 90734040 T C 19 GENIC homozygous 56433169 5 90734045 90734046 C CCACACA 17 GENIC heterozygous 56433171 5 90735897 90735898 A G 12 GENIC homozygous 55546549 5 90736107 90736108 T C 10 GENIC homozygous 55546551 5 90736713 90736714 T TC 23 GENIC homozygous 55546553 5 90737438 90737439 C T 27 GENIC homozygous 56037482 5 90738441 90738442 C T 4 GENIC homozygous 56433173 5 90739616 90739617 T C 1 GENIC homozygous 56349572 5 90710832 90710833 C CTAATAA 1 GENIC homozygous 56489648 5 90711905 90711914 AAAAAAAAA --------- 1 GENIC homozygous 56489649 5 90734045 90734046 C CACCACACACA 17 GENIC heterozygous 56489650 5 90741407 90741408 G T 8 GENIC homozygous 56167174 5 90742306 90742307 C A 6 GENIC homozygous 55546613 5 90742320 90742321 A G 8 GENIC homozygous 55546615 5 90742347 90742348 A AT 6 GENIC homozygous 56037484 5 90743101 90743102 A G 18 GENIC homozygous 55546619 5 90743268 90743278 TGTCTCTGTC ---------- 10 GENIC homozygous 55546621 5 90743293 90743294 C G 13 GENIC homozygous 56349574 5 90743522 90743523 C T 12 GENIC homozygous 55546625 5 90743591 90743592 A C 12 GENIC homozygous 56037485 5 90743836 90743849 TTTTTTTTTTTTT ------------- 4 GENIC heterozygous 56489651 5 90743837 90743849 TTTTTTTTTTTT ------------ 4 GENIC heterozygous 56433175 5 90744794 90744795 A AT 5 GENIC homozygous 56037486 5 90744875 90744876 T TC 12 GENIC homozygous 55546627 5 90744949 90744950 C CA 14 GENIC possibly homozygous 56037487 5 90745836 90745837 G A 23 GENIC homozygous 55546629 5 90746501 90746502 T C 7 GENIC homozygous 55546631 5 90746521 90746522 C G 8 GENIC homozygous 55546633 5 90746538 90746539 T C 6 GENIC homozygous 55546635 5 90746614 90746615 A T 3 GENIC homozygous 55546637 5 90746626 90746630 AAAA ---- 3 GENIC homozygous 56037488 5 90746944 90746945 G A 13 GENIC homozygous 56167179 5 90747403 90747404 T TAAA 3 GENIC heterozygous 56489652 5 90747702 90747703 T TAC 23 GENIC possibly homozygous 55546647 5 90748188 90748189 A G 13 GENIC homozygous 56037491 5 90750783 90750784 T C 3 GENIC homozygous 55546659 5 90749671 90749672 A G 43 GENIC homozygous 55546651 5 90750493 90750494 G A 19 GENIC homozygous 55546653 5 90750699 90750700 T TATA 3 GENIC homozygous 55546657 5 90750701 90750702 T A 4 GENIC homozygous 56433177 5 90751049 90751050 C T 6 GENIC homozygous 55546661 5 90751798 90751799 A G 16 GENIC homozygous 55546663 5 90752422 90752423 A AT 3 GENIC homozygous 55546668 5 90752830 90752831 G A 9 GENIC homozygous 56037494 5 90753219 90753220 T A 16 GENIC homozygous 55546670 5 90754571 90754572 C T 9 GENIC homozygous 56167181 5 90754981 90754982 C CAG 2 GENIC homozygous 56433179 5 90754985 90754986 C CACACACACACACACACACACACACACACACACACACAT 7 GENIC heterozygous 56433181 5 90755119 90755120 A G 11 GENIC homozygous 55546674 5 90755278 90755279 T G 13 GENIC homozygous 55546676 5 90756072 90756073 G C 14 GENIC homozygous 55546678 5 90756403 90756404 C - 16 GENIC homozygous 55546680 5 90757443 90757455 CACACACACACA ------------ 18 GENIC homozygous 56037495 5 90758118 90758119 A G 20 GENIC homozygous 55546690 5 90758420 90758421 C A 29 GENIC homozygous 55546692 5 90758509 90758510 C A 19 GENIC homozygous 55546694 5 90758781 90758782 G T 9 GENIC homozygous 56037497 5 90759407 90759408 C T 10 GENIC homozygous 55546698 5 90760395 90760396 T A 13 GENIC homozygous 56037499 5 90760891 90760892 A - 13 GENIC homozygous 56037500 5 90761041 90761042 T C 24 GENIC homozygous 55546704 5 90761074 90761075 G C 23 GENIC homozygous 55546706 5 90761254 90761255 T G 5 GENIC homozygous 55546708 5 90762993 90762994 G A 18 GENIC homozygous 55546710 5 90763010 90763011 T C 19 GENIC homozygous 55546712 5 90763210 90763211 C CAAA 9 GENIC homozygous 55546714 5 90763823 90763824 A ACAGCAGCAGCAGCAGCAGCAGCAGCAG 10 GENIC homozygous 56489653 5 90766330 90766331 G A 14 GENIC homozygous 55546722 5 90766967 90766968 C T 34 GENIC homozygous 56037501 5 90767876 90767877 G A 32 GENIC homozygous 55546724 5 90768197 90768198 T - 13 GENIC homozygous 55546726 5 90769782 90769783 A G 9 GENIC homozygous 55546730 5 90770154 90770155 A G 16 GENIC homozygous 55546732 5 90770642 90770643 C T 13 GENIC homozygous 55546734 5 90770952 90770953 G A 21 GENIC homozygous 55546736 5 90771185 90771186 G - 11 GENIC homozygous 56167183 5 90771187 90771188 C T 10 GENIC homozygous 56489654 5 90771190 90771193 GAT --- 9 GENIC homozygous 56167185 5 90771195 90771202 AAGGAAA ------- 9 GENIC homozygous 56167187 5 90778724 90778725 A - 14 GENIC possibly homozygous 55546748 5 90772558 90772559 A ATT 12 GENIC homozygous 55546740 5 90773703 90773704 T C 9 GENIC homozygous 55546742 5 90777314 90777315 A AT 3 GENIC homozygous 55546744 5 90778909 90778910 G A 14 GENIC homozygous 55546750 5 90779112 90779113 T C 23 GENIC homozygous 56037504 5 90779313 90779314 A - 21 GENIC homozygous 55546752 5 90780896 90780897 T C 3 GENIC homozygous 55546756 5 90780958 90780959 G A 4 GENIC homozygous 55546758 5 90781070 90781071 C G 16 GENIC homozygous 55546760 5 90781681 90781682 T TA 17 GENIC homozygous 55546762 5 90781768 90781769 T A 15 GENIC homozygous 55546764 5 90782435 90782436 T C 25 GENIC homozygous 55546768 5 90782503 90782504 A AACACACACACAC 11 GENIC homozygous 56489655