chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 152491545 152491546 G GTTA 3 GENIC homozygous 55798903 5 152491673 152491674 T TG 2 GENIC homozygous 55928203 5 152493539 152493543 CCCC ---- 10 GENIC homozygous 55928205 5 152493680 152493681 T - 11 GENIC homozygous 55928207 5 152493744 152493745 C CG 11 GENIC homozygous 55798904 5 152494422 152494423 C CTTTTTT 3 GENIC heterozygous 56461179 5 152494422 152494423 C CTTTTTTTTT 3 GENIC heterozygous 56461180 5 152494702 152494712 GTGTGTGTGT ---------- 5 GENIC homozygous 56461181 5 152495428 152495431 TTT --- 26 GENIC homozygous 55928211 5 152495950 152495954 TATT ---- 1 GENIC homozygous 55928213 5 152497309 152497311 GG -- 18 GENIC homozygous 55928215 5 152500702 152500703 G A 15 GENIC homozygous 55928217 5 152501663 152501664 A G 28 GENIC homozygous 55928219 5 152502367 152502368 A ATT 14 GENIC homozygous 55928221 5 152504521 152504525 AAGT ---- 14 GENIC homozygous 55928223 5 152504677 152504685 TTTTTTTG -------- 10 GENIC homozygous 55928225 5 152505168 152505169 C CT 9 GENIC possibly homozygous 55928227 5 152507859 152507860 C T 25 GENIC homozygous 55928229 5 152508566 152508567 A T 16 GENIC homozygous 55928231 5 152510649 152510650 T C 28 GENIC homozygous 55928233 5 152510933 152510934 C CT 10 GENIC homozygous 55928235 5 152512813 152512814 T C 32 GENIC homozygous 55928237 5 152513196 152513197 C T 26 GENIC homozygous 55928239 5 152514169 152514170 A G 6 GENIC homozygous 55928241 5 152514471 152514472 G - 8 GENIC possibly homozygous 55928243 5 152514625 152514626 C T 23 GENIC homozygous 55928245 5 152516914 152516915 T - 3 GENIC homozygous 55928247 5 152516941 152516942 C A 8 GENIC homozygous 55928249 5 152517730 152517731 C CTT 6 GENIC homozygous 55928251 5 152517890 152517891 T C 6 GENIC homozygous 56356586 5 152519285 152519289 CCCC ---- 6 GENIC heterozygous 55928253 5 152519906 152519912 TTTTTA ------ 41 GENIC homozygous 55928254 5 152520258 152520259 G GT 10 GENIC possibly homozygous 55798906 5 152520419 152520420 C CTTTT 5 GENIC homozygous 56461183 5 152521111 152521121 GCGCGCGCGC ---------- 3 GENIC homozygous 56461184 5 152521198 152521199 T C 4 GENIC homozygous 55928258 5 152521390 152521391 T - 11 GENIC homozygous 55928260 5 152521393 152521394 A - 10 GENIC homozygous 55928262 5 152521988 152521989 C CTTTTTTTTTTTTTTTAAAGATTTA 25 GENIC homozygous 56356589 5 152522114 152522115 G A 6 GENIC homozygous 55928268 5 152522117 152522118 A G 6 GENIC homozygous 55928270 5 152522136 152522137 A G 14 GENIC homozygous 55928272 5 152523650 152523654 GTGT ---- 4 GENIC homozygous 56461185 5 152524025 152524026 C T 40 GENIC homozygous 55928274 5 152524026 152524027 C T 41 GENIC homozygous 55928276 5 152524592 152524593 G A 44 GENIC homozygous 55928278 5 152524672 152524673 A G 22 GENIC homozygous 55928280 5 152526032 152526033 G A 28 GENIC homozygous 55928282 5 152526952 152526956 GTGT ---- 7 GENIC heterozygous 56461186 5 152526954 152526956 GT -- 7 GENIC heterozygous 56461187 5 152527912 152527913 T C 19 GENIC homozygous 55928284 5 152528015 152528019 TTTG ---- 18 GENIC homozygous 55928286 5 152528464 152528465 T TTATC 19 GENIC homozygous 55928288 5 152529852 152529853 G GT 21 GENIC possibly homozygous 55928290 5 152530396 152530397 C CTTT 10 GENIC possibly homozygous 55928292 5 152530413 152530414 G T 11 GENIC possibly homozygous 55928294 5 152530618 152530619 T - 5 GENIC homozygous 56190070 5 152530807 152530808 T - 19 GENIC homozygous 55928296 5 152531307 152531308 A - 16 GENIC heterozygous 55928299 5 152531874 152531875 G GT 7 GENIC homozygous 55798908 5 152535352 152535354 GA -- 20 GENIC homozygous 55928301 5 152536762 152536763 T TG 28 GENIC homozygous 55928303 5 152537033 152537034 T TTTTGTTTG 19 GENIC homozygous 55928305 5 152539103 152539104 C CATGT 43 GENIC homozygous 55928307 5 152539323 152539324 T C 53 GENIC homozygous 55928309 5 152539842 152539843 T A 31 GENIC homozygous 55928311 5 152540984 152540985 T - 15 GENIC heterozygous 56532782 5 152541073 152541074 G GTT 23 GENIC homozygous 55928315 5 152541075 152541076 A ACAGAAGTGGTGTC 24 GENIC homozygous 55928317 5 152541077 152541078 A AGTAT 24 GENIC homozygous 55928321 5 152543203 152543204 T TTTTTC 26 GENIC homozygous 55928323 5 152544398 152544399 T C 36 GENIC homozygous 55928327 5 152545779 152545780 C CCA 24 GENIC homozygous 55928329 5 152546837 152546840 TGG --- 5 GENIC heterozygous 55928331 5 152546838 152546840 GG -- 5 GENIC heterozygous 56461188 5 152547477 152547478 C G 29 GENIC homozygous 55928333 5 152547645 152547646 T C 22 GENIC homozygous 55928335 5 152547662 152547663 T - 14 GENIC possibly homozygous 55928337 5 152547743 152547745 TT -- 9 GENIC heterozygous 55928339 5 152548281 152548282 T G 27 GENIC homozygous 55928341 5 152552264 152552265 T TTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2 GENIC homozygous 56461189 5 152552346 152552347 G GA 2 GENIC homozygous 55928343 5 152553913 152553914 A T 26 GENIC homozygous 55928345 5 152557966 152557967 T TA 16 GENIC homozygous 55928347 5 152564130 152564131 T A 16 GENIC homozygous 55928348 5 152564866 152564867 A G 33 GENIC homozygous 55928350 5 152565575 152565576 T - 25 GENIC homozygous 55798909 5 152565640 152565641 T TGG 11 GENIC heterozygous 55928352 5 152565640 152565641 T TG 11 GENIC heterozygous 56461190 5 152566354 152566355 C T 30 GENIC homozygous 56291646 5 152566355 152566356 C T 30 GENIC homozygous 56291647 5 152566599 152566600 T TTTTTG 5 GENIC heterozygous 56461191 5 152566609 152566610 T TTTTTTTG 4 GENIC heterozygous 56461192 5 152566631 152566632 C CTT 5 GENIC homozygous 55928364 5 152567125 152567126 C G 50 GENIC homozygous 55928366 5 152569284 152569285 T C 23 GENIC homozygous 55928368 5 152569299 152569300 A AAC 4 GENIC heterozygous 56495055 5 152569367 152569371 GTCA ---- 5 GENIC homozygous 56461193 5 152570549 152570550 A AC 22 GENIC homozygous 55798910 5 152570815 152570816 G GTT 18 GENIC homozygous 55928374 5 152571547 152571548 T - 19 GENIC homozygous 55928376 5 152572307 152572308 A - 4 GENIC homozygous 55928378 5 152572682 152572683 T G 30 GENIC homozygous 55928380 5 152574292 152574293 T C 37 GENIC homozygous 55928382 5 152574303 152574304 G T 33 GENIC homozygous 55928384 5 152575726 152575727 T TACTC 20 GENIC homozygous 55928386 5 152579534 152579542 GTGTGTGT -------- 10 GENIC homozygous 55928388 5 152579740 152579741 T - 17 GENIC possibly homozygous 55928392 5 152580032 152580044 TCTCTGTCTCTG ------------ 3 GENIC heterozygous 56554531 5 152580154 152580155 C G 25 GENIC homozygous 55928400 5 152580162 152580163 C CACACACAG 25 GENIC homozygous 56356592 5 152580389 152580390 T - 13 GENIC heterozygous 56495057 5 152580402 152580403 T A 22 GENIC possibly homozygous 55928404 5 152580792 152580820 CTTCCTTCCTTCCTTCCTTCCTTCCTTC ---------------------------- 14 GENIC homozygous 56461194 5 152582516 152582517 C G 39 GENIC homozygous 55928406 5 152583299 152583300 T C 37 GENIC homozygous 55928408 5 152583771 152583772 C A 29 GENIC homozygous 55928410 5 152584150 152584151 A T 24 GENIC homozygous 55928412 5 152585252 152585253 T - 36 GENIC homozygous 55928414 5 152585257 152585258 G C 39 GENIC homozygous 56356594 5 152585258 152585259 T G 42 GENIC homozygous 56356596 5 152585724 152585725 T - 13 GENIC homozygous 55928416 5 152589124 152589125 C G 28 GENIC homozygous 55928417 5 152589422 152589423 C CT 14 GENIC homozygous 55928419 5 152589743 152589744 C T 27 GENIC homozygous 55928421 5 152589972 152589975 AAA --- 26 GENIC homozygous 55798911 5 152591641 152591659 TTTCTTTCTTTCTTTTTT ------------------ 7 GENIC possibly homozygous 56461195 5 152591684 152591685 T C 26 GENIC homozygous 55928431 5 152595533 152595534 T TGTGTGCGCGC 2 GENIC heterozygous 56461197 5 152592607 152592611 ACAC ---- 7 GENIC homozygous 55798912 5 152592673 152592674 G A 21 GENIC homozygous 55928433 5 152593018 152593019 A G 39 GENIC homozygous 55928435 5 152593592 152593624 GTGGTGGTGTGTGTGTGTGTGTGTGTGTGTGT -------------------------------- 3 GENIC homozygous 56461196 5 152595533 152595534 T TGTGTGTGCGCGC 2 GENIC heterozygous 56461198 5 152596273 152596281 CAAACAAA -------- 17 GENIC homozygous 55928443 5 152597352 152597353 G A 35 GENIC homozygous 55928445 5 152597407 152597411 CAAT ---- 39 GENIC homozygous 55928447 5 152597600 152597601 A G 36 GENIC homozygous 55928449 5 152598188 152598196 GCTCCTAC -------- 25 GENIC homozygous 55928451 5 152598338 152598339 G T 28 GENIC homozygous 55928453 5 152598761 152598763 TT -- 21 GENIC homozygous 55928455 5 152598775 152598776 T A 22 GENIC possibly homozygous 56356597 5 152601984 152601985 A G 17 GENIC homozygous 55928459 5 152602238 152602239 C G 28 GENIC homozygous 55928461 5 152602239 152602240 C A 28 GENIC homozygous 55928463 5 152602487 152602488 T C 28 GENIC homozygous 55928465 5 152604158 152604159 C T 22 GENIC homozygous 55928467 5 152605060 152605062 CC -- 7 GENIC heterozygous 56461199 5 152605761 152605768 GTCGTCC ------- 1 GENIC homozygous 56461200 5 152606753 152606754 C CTT 12 GENIC heterozygous 55928469 5 152606753 152606754 C CT 12 GENIC heterozygous 56461201 5 152607421 152607422 T G 22 GENIC homozygous 55928471 5 152607812 152607813 T TTCTCTC 11 GENIC homozygous 56356599 5 152608079 152608080 C CGT 21 GENIC possibly homozygous 55928475 5 152609861 152609862 C T 39 GENIC homozygous 55928477 5 152611191 152611192 G GACTCACTC 11 GENIC homozygous 56461202 5 152611554 152611555 G C 49 GENIC homozygous 55928479 5 152612997 152612998 C T 17 GENIC homozygous 55928481 5 152613842 152613843 C T 38 GENIC homozygous 55928482 5 152614733 152614734 T - 11 GENIC homozygous 55928484 5 152615684 152615685 A AAT 2 GENIC homozygous 55928486 5 152616405 152616406 C CT 13 GENIC heterozygous 55928488 5 152616405 152616406 C CTT 13 GENIC heterozygous 55928490