chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 138933019 138933020 C T 30 GENIC homozygous 55748480 5 138933121 138933122 G A 31 GENIC homozygous 55748481 5 138936670 138936671 A G 13 GENIC homozygous 55748482 5 138936828 138936829 A ATATATAT 4 GENIC homozygous 55748484 5 138936830 138936831 A T 4 GENIC homozygous 56552936 5 138937266 138937267 G A 28 GENIC homozygous 55748487 5 138937302 138937303 C T 34 GENIC homozygous 55748488 5 138938407 138938408 A T 23 GENIC homozygous 55748489 5 138938676 138938677 C T 34 GENIC homozygous 55748490 5 138939629 138939630 G A 42 GENIC homozygous 55748491 5 138940002 138940003 T C 36 GENIC homozygous 55748492 5 138941707 138941708 C A 21 GENIC homozygous 55748493 5 138942752 138942753 C T 27 GENIC homozygous 55748494 5 138942790 138942792 GG -- 24 GENIC homozygous 55748495 5 138942793 138942794 G T 24 GENIC possibly homozygous 56354963 5 138942994 138942996 GG -- 23 GENIC homozygous 55748497 5 138943214 138943215 T C 33 GENIC homozygous 55748498 5 138943540 138943541 G C 32 GENIC homozygous 55748499 5 138944570 138944571 C T 44 GENIC homozygous 55748500 5 138944677 138944678 G C 36 GENIC homozygous 55748501 5 138944731 138944732 T C 34 GENIC homozygous 55748502 5 138945826 138945827 G C 36 GENIC homozygous 55748503 5 138945970 138945971 C CTTTT 3 GENIC heterozygous 56457231 5 138946065 138946066 C CT 8 GENIC homozygous 55748504 5 138946517 138946518 G A 40 GENIC homozygous 55748505 5 138948965 138948966 A G 45 GENIC homozygous 55748506 5 138949999 138950000 A G 15 GENIC homozygous 56552938 5 138950002 138950003 A G 15 GENIC homozygous 56552940 5 138950005 138950006 A G 15 GENIC homozygous 56552942 5 138950011 138950012 A G 21 GENIC homozygous 56552943 5 138950751 138950752 C T 33 GENIC homozygous 55748508 5 138950956 138950957 G A 46 GENIC homozygous 55748509 5 138951206 138951207 A G 31 GENIC homozygous 55748510 5 138952942 138952943 A C 19 GENIC homozygous 55748511 5 138961125 138961126 G A 36 GENIC homozygous 55748513 5 138961502 138961506 TGTG ---- 19 GENIC heterozygous 56234575 5 138961504 138961506 TG -- 19 GENIC possibly homozygous 55748514 5 138962488 138962489 G A 26 GENIC homozygous 55748515 5 138962778 138962779 C CA 6 GENIC heterozygous 55748516 5 138962778 138962779 C CAA 6 GENIC heterozygous 55903420 5 138962779 138962780 A - 6 GENIC heterozygous 56234576 5 138966291 138966292 C CTTTTT 13 GENIC heterozygous 56457233 5 138966649 138966650 T C 39 GENIC homozygous 55748518 5 138966874 138966875 T A 55 GENIC homozygous 55748519 5 138968219 138968220 T TC 3 GENIC homozygous 55748520 5 138968312 138968313 A G 17 GENIC homozygous 55748521 5 138969244 138969245 G - 31 GENIC homozygous 55748522 5 138971663 138971664 A AAG 2 GENIC homozygous 56552945 5 138971920 138971921 G - 31 GENIC homozygous 55748523 5 138971932 138971933 T - 31 GENIC homozygous 55748524 5 138972054 138972056 CC -- 9 GENIC homozygous 55748525 5 138976430 138976431 T - 17 GENIC homozygous 55748527 5 138978206 138978207 T A 30 GENIC homozygous 55748528 5 138980643 138980644 C T 30 GENIC homozygous 55748529 5 138981011 138981012 C T 24 GENIC homozygous 55748530 5 138981258 138981259 G GTT 11 GENIC homozygous 55748531 5 138982272 138982273 G GAA 20 GENIC possibly homozygous 55748532 5 138982272 138982273 G GA 20 GENIC heterozygous 56064545 5 138982905 138982907 AA -- 19 GENIC homozygous 55748533 5 138983252 138983253 A G 25 GENIC homozygous 55748534 5 138983324 138983325 C T 26 GENIC homozygous 55748535 5 138983643 138983644 C - 3 GENIC homozygous 55748536 5 138984098 138984099 A G 32 GENIC homozygous 55748537 5 138984536 138984537 C T 21 GENIC homozygous 55748538 5 138984950 138984951 G A 15 GENIC homozygous 55748539 5 138986371 138986372 A C 35 GENIC homozygous 55748540 5 138987906 138987907 T TC 19 GENIC homozygous 55748541 5 138987909 138987913 CTTT ---- 21 GENIC homozygous 55748542 5 138988034 138988035 T G 7 GENIC homozygous 55748543 5 138988308 138988320 AGGAACATAGTA ------------ 21 GENIC homozygous 55748546 5 138988379 138988380 G GA 13 GENIC homozygous 55748547 5 138988755 138988756 G A 19 GENIC homozygous 55748548 5 138988777 138988778 G A 20 GENIC homozygous 55748549 5 138989008 138989009 C T 34 GENIC homozygous 55748550 5 138989227 138989228 T C 13 GENIC homozygous 55748551 5 138989801 138989802 G A 33 GENIC homozygous 55748552 5 138991851 138991853 CC -- 8 GENIC homozygous 55748553 5 138991854 138991855 C A 8 GENIC homozygous 56457239 5 138991855 138991856 C CAG 8 GENIC homozygous 55748554 5 138991861 138991862 C T 7 GENIC homozygous 55748555 5 138991869 138991870 A AG 6 GENIC heterozygous 55903464 5 138992160 138992161 A T 29 GENIC homozygous 55748556 5 138992625 138992626 C T 22 GENIC homozygous 55748557 5 138992905 138992906 G A 41 GENIC homozygous 55748558 5 138992907 138992908 A G 38 GENIC homozygous 55748559 5 138993322 138993323 C A 30 GENIC homozygous 55748560 5 138994999 138995000 G GA 23 GENIC homozygous 55748561 5 138995129 138995130 A G 27 GENIC homozygous 55748562 5 138995259 138995260 C CAA 16 GENIC heterozygous 55748563 5 138995259 138995260 C CA 16 GENIC possibly homozygous 55748564 5 138995427 138995428 T G 19 GENIC homozygous 55748565 5 138995436 138995437 T C 22 GENIC homozygous 55748566 5 138995825 138995826 C T 19 GENIC homozygous 55748567 5 138995859 138995860 C T 16 GENIC homozygous 55748568 5 138996023 138996024 C CAAA 18 GENIC homozygous 55748569 5 138996217 138996218 T A 18 GENIC homozygous 55748570 5 138996338 138996339 T - 2 GENIC homozygous 55748571 5 138997610 138997611 C CT 20 GENIC possibly homozygous 55748586 5 138998792 138998793 C CTT 4 GENIC homozygous 56552947 5 138998968 138998969 T TA 16 GENIC homozygous 55748587 5 139001452 139001454 TT -- 14 GENIC possibly homozygous 55748589 5 139001453 139001454 T - 14 GENIC heterozygous 56552949 5 139001774 139001775 A AACACACAC 2 GENIC heterozygous 56552951 5 139002455 139002459 AAAA ---- 14 GENIC homozygous 56552952 5 139002796 139002798 TG -- 53 GENIC heterozygous 56354964 5 139004016 139004017 A G 34 GENIC homozygous 55748591 5 139005921 139005923 TT -- 3 GENIC homozygous 56552954 5 139011503 139011504 A G 28 GENIC homozygous 55748594 5 139012014 139012015 A C 25 GENIC homozygous 55748598 5 139012387 139012388 T TC 17 GENIC homozygous 55748599 5 139013360 139013386 GTGTGTGTGTGTGTGTGTGTGTGTGT -------------------------- 6 GENIC homozygous 56552956 5 139013777 139013778 A - 8 GENIC homozygous 55748601 5 139013916 139013917 T C 20 GENIC homozygous 55748602 5 139014071 139014072 G GGTGT 4 GENIC homozygous 55748604 5 139014118 139014119 G A 18 GENIC homozygous 55748605 5 139014917 139014918 A - 26 GENIC homozygous 55748607 5 139014919 139014920 A AT 26 GENIC homozygous 55748608 5 139014920 139014921 G A 26 GENIC homozygous 56552958 5 139014931 139014932 C A 22 GENIC homozygous 55748609 5 139015429 139015430 G T 19 GENIC homozygous 55748610 5 139015501 139015502 T C 25 GENIC homozygous 55748611 5 139015502 139015503 G C 25 GENIC homozygous 55748612 5 139018112 139018113 T C 10 GENIC homozygous 55748618 5 138988062 138988063 C CAAAAAAAAAAAA 1 GENIC homozygous 56493746 5 139015931 139015932 A G 24 GENIC homozygous 55748613 5 139016089 139016090 C T 25 GENIC homozygous 55748614 5 139016173 139016174 G T 19 GENIC homozygous 55748615 5 139017238 139017239 C G 43 GENIC homozygous 55748617 5 139018272 139018273 A AT 15 GENIC homozygous 55748619 5 139018294 139018295 C T 15 GENIC homozygous 55748620 5 139018449 139018452 TTT --- 15 GENIC homozygous 55748621 5 139018531 139018532 C T 19 GENIC homozygous 55748623 5 139019331 139019332 T C 24 GENIC homozygous 55748624 5 139019567 139019568 G GGAGAGAGAGAGAGAGA 7 GENIC homozygous 56457244 5 139019592 139019593 C G 19 GENIC homozygous 55748626 5 139019600 139019601 C G 24 GENIC homozygous 55748628 5 139019608 139019609 C G 26 GENIC homozygous 55748629 5 139019616 139019617 C G 23 GENIC homozygous 55748631 5 139020131 139020132 G - 21 GENIC homozygous 55748632 5 139020806 139020807 A G 20 GENIC homozygous 55748633 5 139020926 139020927 A G 17 GENIC homozygous 55748634 5 139021042 139021045 AAA --- 11 GENIC heterozygous 56493747 5 139021043 139021045 AA -- 11 GENIC heterozygous 56457245 5 139021572 139021573 G GGTTTT 13 GENIC possibly homozygous 55748637 5 139022250 139022251 T C 19 GENIC homozygous 55748638 5 139022560 139022561 A - 12 GENIC homozygous 55748639 5 139023251 139023253 AA -- 11 GENIC homozygous 55748640 5 139024408 139024410 AA -- 13 GENIC homozygous 55748641 5 139025190 139025191 T C 18 GENIC homozygous 55748642 5 139025672 139025673 T C 15 GENIC homozygous 55748643 5 139026194 139026195 C T 25 GENIC homozygous 55748644 5 139026645 139026646 C A 16 GENIC homozygous 56457247 5 139026646 139026647 A C 16 GENIC homozygous 56457248 5 139026659 139026660 T A 19 GENIC homozygous 55748645 5 139026665 139026666 C A 19 GENIC homozygous 55748646 5 139026668 139026669 A T 19 GENIC homozygous 55748647 5 139027557 139027558 C T 33 GENIC homozygous 55748648 5 139027617 139027618 C T 34 GENIC homozygous 55748649 5 139027678 139027679 T G 23 GENIC homozygous 55748650 5 139028702 139028703 T TA 8 GENIC homozygous 55748651 5 139028811 139028812 G GA 6 GENIC heterozygous 55748652 5 139028942 139028943 A G 20 GENIC homozygous 55748653 5 139029150 139029151 T - 16 GENIC homozygous 55748654 5 139029505 139029506 G A 18 GENIC homozygous 55748655 5 139030616 139030617 T TCA 2 GENIC homozygous 56552960 5 139032237 139032238 T TA 16 GENIC homozygous 55748657 5 139032258 139032259 A AT 18 GENIC homozygous 55748658 5 139032263 139032264 T A 15 GENIC homozygous 55748659 5 139032292 139032293 C A 14 GENIC homozygous 55748660 5 139032295 139032296 G A 17 GENIC homozygous 55748661 5 139032574 139032575 C CAAAAAAAAAAAA 1 GENIC homozygous 56354965 5 139032587 139032588 C A 1 GENIC homozygous 56354966 5 139032946 139032947 C CAAA 6 GENIC heterozygous 55748663 5 139032946 139032947 C CAA 6 GENIC heterozygous 56457252 5 139033538 139033539 T - 10 GENIC homozygous 55748664 5 139033622 139033624 AA -- 4 GENIC heterozygous 55748665 5 139035043 139035044 A G 22 GENIC homozygous 55748673 5 139035476 139035477 G A 21 GENIC homozygous 55748674 5 139035580 139035581 A G 26 GENIC homozygous 55748675 5 139037588 139037612 ACACACACACACACACACACACAC ------------------------ 9 GENIC homozygous 56354967 5 139038091 139038092 A AGGG 7 GENIC homozygous 55748679 5 139036735 139036736 A - 11 GENIC homozygous 55748677 5 139037090 139037091 G A 27 GENIC homozygous 55748678 5 139039375 139039376 C - 16 GENIC homozygous 55748680 5 139039488 139039489 A G 10 GENIC homozygous 55748681 5 139039585 139039586 T C 13 GENIC homozygous 55748682 5 139039615 139039616 C A 7 GENIC homozygous 55748683 5 139041395 139041396 C A 6 GENIC homozygous 56457254 5 139041397 139041398 C CAAA 2 GENIC homozygous 56552961 5 139041763 139041764 G GGTGT 10 GENIC homozygous 56493749 5 139043012 139043013 G - 11 GENIC homozygous 55748684 5 139043024 139043025 G - 13 GENIC homozygous 55748685 5 139043040 139043041 G - 13 GENIC homozygous 55748686 5 139043061 139043062 G - 18 GENIC homozygous 55748687 5 139043118 139043119 G - 24 GENIC homozygous 55748688 5 139043126 139043127 G - 24 GENIC homozygous 55748689 5 139043159 139043160 T - 18 GENIC homozygous 55748690 5 139045157 139045158 A - 7 GENIC possibly homozygous 55748691 5 139045507 139045508 G T 18 GENIC homozygous 55748692 5 139047618 139047619 C CAAAAACAA 5 GENIC homozygous 55748693 5 139048395 139048396 T - 25 GENIC homozygous 55748694 5 139049351 139049352 C A 29 GENIC homozygous 55748695 5 139049609 139049610 C CAAA 9 GENIC homozygous 56552963 5 139050494 139050495 G GAAAGAA 1 GENIC homozygous 56552965 5 139051929 139051937 AGTTATAC -------- 15 GENIC homozygous 55748698 5 139053117 139053141 AAGGAAGAGGAGGAGGCGAGGAGA ------------------------ 10 GENIC homozygous 56552966 5 139053325 139053326 A - 4 GENIC homozygous 55748704 5 139053816 139053817 T G 20 GENIC homozygous 55748705 5 139057374 139057375 T A 19 GENIC homozygous 55748713 5 139053871 139053872 A - 19 GENIC possibly homozygous 55748707 5 139054073 139054074 T TA 9 GENIC homozygous 55748709 5 139054368 139054369 T G 18 GENIC homozygous 55748710 5 139056391 139056392 T TA 4 GENIC heterozygous 56552968 5 139056391 139056392 T TAA 4 GENIC heterozygous 55748711 5 139056392 139056393 T A 12 GENIC homozygous 55748712 5 139058048 139058049 A G 24 GENIC homozygous 55748714 5 139058644 139058645 T TGTATTTTATTAAGACAGGGTTTCTCTGTATAGCACTGGCTGTCCTGGAACTCCATCATCTG 10 GENIC homozygous 56457260 5 139059369 139059370 G GGTGTGTGTGT 5 GENIC homozygous 56532175 5 139059776 139059777 C T 13 GENIC homozygous 55748715 5 139060116 139060117 G - 11 GENIC possibly homozygous 55748716 5 139060423 139060424 A ACTCAATGAAGACAACTTGCATGGGCAAATATGAAAGCCAATATTTCTGTATTTCTGGTTTATAATCACACCTAT 11 GENIC homozygous 56457262 5 139061115 139061116 C CGTGTGT 9 GENIC homozygous 55748719 5 139062771 139062772 A AG 16 GENIC homozygous 55748720 5 139063087 139063181 AACCAAAAAAAAAAAAAAAAAAAAAAAGGTAACTAGGGGTTGGGGATTTAGCTCAAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAGA ---------------------------------------------------------------------------------------------- 15 GENIC heterozygous 56457264 5 139063434 139063435 A - 15 GENIC homozygous 55748724 5 139063940 139063942 AT -- 17 GENIC homozygous 55748725 5 139064985 139064986 T A 29 GENIC homozygous 55748726 5 139066682 139066683 T TTTTTTTGG 10 GENIC heterozygous 56457265 5 139067473 139067474 C T 19 GENIC homozygous 55748728 5 139067546 139067548 AA -- 8 GENIC homozygous 56457266 5 139067864 139067865 T - 12 GENIC possibly homozygous 55748730 5 139069221 139069222 A G 27 GENIC homozygous 55748731 5 139070188 139070189 G GAA 7 GENIC homozygous 55748732 5 139070192 139070193 G A 10 GENIC homozygous 56354968 5 139074639 139074640 A G 15 GENIC homozygous 55748737 5 139074744 139074745 T TG 2 GENIC homozygous 56552970 5 139074747 139074748 T TTTTTGTTTTTTTG 2 GENIC homozygous 56552971 5 139074767 139074769 CC -- 2 GENIC homozygous 55748739 5 139076241 139076242 A AACACACAC 8 GENIC heterozygous 56552973 5 139076241 139076242 A AACACACACAC 8 GENIC heterozygous 56552975 5 139077260 139077261 A - 5 GENIC heterozygous 55748743 5 139077529 139077530 T TA 11 GENIC homozygous 55748744 5 139077541 139077542 G A 13 GENIC homozygous 56354969 5 139078546 139078547 T C 30 GENIC homozygous 55748745