chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 54588818 54588819 G GT 55 GENIC homozygous 56307468 5 54592639 54592640 A ATG 45 GENIC possibly homozygous 55380749 5 54593077 54593078 T G 34 GENIC homozygous 55380750 5 54593347 54593348 A G 56 GENIC homozygous 55380751 5 54594822 54594823 T TA 8 GENIC homozygous 56118478 5 54594843 54594844 T TAAA 1 GENIC homozygous 55380757 5 54596159 54596163 TCTT ---- 26 GENIC homozygous 55380759 5 54596161 54596166 TTTCT ----- 26 GENIC homozygous 55380760 5 54596256 54596257 C T 45 GENIC homozygous 56307469 5 54596495 54596500 AACAA ----- 37 GENIC homozygous 56307470 5 54597616 54597617 G A 66 GENIC possibly homozygous 56307471 5 54599672 54599673 A G 41 GENIC homozygous 55380765 5 54601077 54601078 G A 63 GENIC homozygous 56307472 5 54601390 54601391 C CAA 24 GENIC heterozygous 55380766 5 54601390 54601391 C CAAA 24 GENIC possibly homozygous 55877729 5 54601420 54601421 C T 32 GENIC homozygous 56307473 5 54601638 54601639 G - 21 GENIC homozygous 55380768 5 54602195 54602196 C T 63 GENIC homozygous 56217438 5 54603598 54603599 T A 30 GENIC homozygous 56307474 5 54605407 54605411 TGTC ---- 14 GENIC homozygous 55380774 5 54605451 54605455 TGTG ---- 36 GENIC heterozygous 55380776 5 54605915 54605916 T C 40 GENIC homozygous 55380779 5 54607124 54607125 T A 47 GENIC homozygous 55380783 5 54608116 54608117 T C 44 GENIC homozygous 55380786 5 54608333 54608334 T G 56 GENIC homozygous 56307475 5 54609204 54609205 C T 75 GENIC homozygous 56307476 5 54611537 54611538 T C 44 GENIC homozygous 55380792 5 54611902 54611903 G GGGAAAGA 29 GENIC homozygous 55380793 5 54612257 54612258 A C 54 GENIC homozygous 55380794 5 54612352 54612353 G C 42 GENIC homozygous 55380795 5 54612392 54612393 C T 55 GENIC homozygous 55380796 5 54612593 54612595 AA -- 29 GENIC heterozygous 56155058 5 54612594 54612595 A - 29 GENIC possibly homozygous 56307477 5 54612836 54612837 T C 44 GENIC homozygous 55380798 5 54612886 54612887 A T 41 GENIC homozygous 55380799 5 54612956 54612957 T C 58 GENIC possibly homozygous 55380800 5 54613176 54613177 G A 45 GENIC homozygous 55380801 5 54613183 54613184 A C 45 GENIC homozygous 55380802 5 54613273 54613274 A T 28 GENIC homozygous 55380803 5 54613285 54613286 T G 25 GENIC heterozygous 56307478 5 54613288 54613289 A G 27 GENIC homozygous 55380804 5 54613405 54613406 G T 40 GENIC homozygous 55380806 5 54613521 54613522 C T 49 GENIC homozygous 56217444 5 54613528 54613529 T TC 50 GENIC homozygous 55380807 5 54613725 54613726 T TGAGGGAAG 23 GENIC homozygous 55380808 5 54614101 54614102 G T 55 GENIC homozygous 55380809 5 54614302 54614303 A T 39 GENIC homozygous 55380810 5 54614475 54614476 G A 51 GENIC homozygous 55380812 5 54615297 54615298 C T 56 GENIC homozygous 55380814 5 54615613 54615614 G C 67 GENIC homozygous 55380815 5 54615676 54615677 A G 67 GENIC homozygous 55380816 5 54615738 54615739 A G 55 GENIC homozygous 55380817 5 54616377 54616378 C T 37 GENIC homozygous 55380818 5 54616616 54616617 A G 45 GENIC homozygous 56307479 5 54616789 54616790 A C 60 GENIC homozygous 55380821 5 54617170 54617171 C CTT 32 GENIC heterozygous 55380823 5 54617170 54617171 C CT 32 GENIC possibly homozygous 55877735 5 54617361 54617362 A G 55 GENIC homozygous 55380825 5 54617693 54617694 C G 38 GENIC homozygous 56217446 5 54617733 54617734 T C 42 GENIC homozygous 55380826 5 54618042 54618044 AG -- 36 GENIC homozygous 56217447 5 54618109 54618110 T C 31 GENIC homozygous 56307480 5 54618474 54618475 G C 49 GENIC possibly homozygous 55380827 5 54619050 54619051 G A 55 GENIC homozygous 55380829 5 54619253 54619254 C T 18 GENIC possibly homozygous 56217448 5 54619267 54619275 AAAAAAAA -------- 9 GENIC heterozygous 55380830 5 54619268 54619275 AAAAAAA ------- 9 GENIC possibly homozygous 56217449 5 54619310 54619311 A T 20 GENIC homozygous 55380831 5 54619439 54619440 C T 24 GENIC homozygous 56307481 5 54619594 54619595 A AT 39 GENIC homozygous 55380833 5 54620315 54620316 C T 41 GENIC homozygous 55380834 5 54620432 54620433 T G 40 GENIC homozygous 55380835 5 54620536 54620537 C T 49 GENIC homozygous 55380836 5 54620691 54620692 G - 45 GENIC homozygous 55380837 5 54620826 54620827 A G 47 GENIC homozygous 55380838 5 54620977 54620978 G A 60 GENIC homozygous 56217450 5 54621130 54621131 A - 25 GENIC homozygous 55380839 5 54621312 54621313 T C 39 GENIC homozygous 55380840 5 54621337 54621338 T C 33 GENIC homozygous 55380841 5 54621338 54621339 T G 32 GENIC homozygous 55380842 5 54621361 54621362 T C 29 GENIC homozygous 55380843 5 54621391 54621392 A - 26 GENIC homozygous 55380844 5 54621481 54621482 C T 31 GENIC homozygous 55380845 5 54621620 54621621 A G 61 GENIC homozygous 56307482 5 54621893 54621894 C A 41 GENIC homozygous 55380847 5 54621943 54621946 ATT --- 30 GENIC homozygous 55380848 5 54622181 54622182 G A 39 GENIC homozygous 55380849 5 54622532 54622533 C T 48 GENIC homozygous 55380850 5 54622901 54622902 A G 48 GENIC homozygous 55380851 5 54623009 54623010 A C 36 GENIC homozygous 55380852 5 54623188 54623189 G A 34 GENIC homozygous 56217456 5 54623191 54623192 G A 33 GENIC homozygous 55380853 5 54623260 54623261 A G 41 GENIC homozygous 55380854 5 54623322 54623323 G GA 19 GENIC heterozygous 55380855 5 54623329 54623330 A AT 26 GENIC heterozygous 56217457 5 54623330 54623331 A AAAAAT 16 GENIC homozygous 55877737 5 54623330 54623331 A T 31 GENIC heterozygous 56217458 5 54623340 54623341 C T 32 GENIC heterozygous 55877739 5 54624055 54624056 A G 46 GENIC possibly homozygous 55380860 5 54624164 54624165 C A 37 GENIC homozygous 56217459 5 54624325 54624326 G C 32 GENIC homozygous 56217460 5 54624343 54624344 G T 37 GENIC homozygous 55380861 5 54624905 54624906 C T 41 GENIC homozygous 55380862 5 54624976 54624977 A G 41 GENIC homozygous 55380863 5 54625072 54625073 C T 38 GENIC homozygous 56217461 5 54625087 54625088 C T 37 GENIC possibly homozygous 56307483 5 54625151 54625152 G A 42 GENIC homozygous 55380866 5 54625656 54625657 A G 36 GENIC homozygous 55380867 5 54625960 54625961 A - 35 GENIC homozygous 55380868 5 54625972 54625973 A G 39 GENIC possibly homozygous 56217462 5 54626521 54626522 G A 42 GENIC homozygous 55380869 5 54626800 54626801 T C 42 GENIC homozygous 55380871 5 54626817 54626818 G A 43 GENIC homozygous 56307484 5 54626916 54626917 G T 21 GENIC homozygous 55380872 5 54627437 54627438 G A 37 GENIC possibly homozygous 55380873 5 54627822 54627823 G A 44 GENIC homozygous 56217464 5 54627997 54627998 G GT 40 GENIC homozygous 55380874 5 54628182 54628183 A G 60 GENIC homozygous 55380875 5 54628404 54628405 A C 49 GENIC homozygous 55380876 5 54628668 54628669 T C 39 GENIC homozygous 55380877 5 54629211 54629212 C T 58 GENIC homozygous 55380878 5 54629767 54629768 G A 52 GENIC homozygous 55380879 5 54629783 54629784 C T 52 GENIC homozygous 55380880 5 54629943 54629944 A G 40 GENIC homozygous 55380881 5 54630092 54630093 T G 51 GENIC homozygous 55380882 5 54630093 54630094 C A 51 GENIC homozygous 55380883 5 54630243 54630244 A AATC 25 GENIC homozygous 55380885 5 54630308 54630309 G A 36 GENIC homozygous 55380886 5 54630586 54630603 TGGACCTACAATAATAC ----------------- 17 GENIC homozygous 56217467 5 54630845 54630846 A - 46 GENIC homozygous 55380888 5 54630958 54630959 T C 28 GENIC homozygous 55380889 5 54631149 54631150 G C 45 GENIC possibly homozygous 55380890 5 54631354 54631355 G A 51 GENIC homozygous 55380891 5 54631520 54631521 C A 54 GENIC homozygous 56217468 5 54631683 54631684 C T 52 GENIC homozygous 56307485 5 54631734 54631735 G T 51 GENIC homozygous 56217469 5 54631915 54631916 A G 47 GENIC homozygous 55380894 5 54632567 54632568 G A 52 GENIC homozygous 55380897 5 54633271 54633272 C G 52 GENIC heterozygous 56307486 5 54633683 54633684 G T 58 GENIC homozygous 56307487 5 54633766 54633767 C T 47 GENIC homozygous 56307488 5 54634199 54634200 G A 49 GENIC homozygous 56307489 5 54634361 54634362 G A 33 GENIC homozygous 55380900 5 54634463 54634464 G A 23 GENIC homozygous 55380901 5 54634956 54634957 G A 36 GENIC homozygous 55380902 5 54635088 54635089 G A 34 GENIC possibly homozygous 55380903 5 54635101 54635102 C A 33 GENIC homozygous 55380904 5 54635189 54635190 C T 58 GENIC homozygous 55380905 5 54635230 54635231 G - 48 GENIC homozygous 55380906 5 54635303 54635304 C T 71 GENIC possibly homozygous 55380907 5 54635332 54635333 T G 75 GENIC possibly homozygous 55380908 5 54635384 54635385 T C 52 GENIC homozygous 55380909 5 54635484 54635485 C T 60 GENIC homozygous 55380910 5 54635574 54635575 A - 49 GENIC homozygous 55380911 5 54635759 54635760 T C 49 GENIC homozygous 56217472 5 54635829 54635830 C T 44 GENIC homozygous 55380914 5 54635842 54635843 G C 50 GENIC homozygous 55380915 5 54635855 54635856 T A 44 GENIC homozygous 55380916 5 54635871 54635872 T C 45 GENIC homozygous 55380917 5 54635911 54635912 C T 45 GENIC homozygous 55380918 5 54635980 54635981 A C 37 GENIC homozygous 55380919 5 54635982 54635983 T G 40 GENIC homozygous 55380920 5 54636030 54636031 C T 41 GENIC homozygous 55380921 5 54636031 54636032 C T 41 GENIC homozygous 55380922 5 54636088 54636089 G A 37 GENIC homozygous 55380923 5 54636095 54636096 A G 39 GENIC homozygous 55380924 5 54636109 54636110 A - 30 GENIC homozygous 56307490 5 54636168 54636169 T A 38 GENIC homozygous 55380926 5 54636279 54636280 A AG 35 GENIC homozygous 55380927 5 54636286 54636287 G GT 36 GENIC homozygous 55380928 5 54636620 54636622 AG -- 28 GENIC homozygous 55380929 5 54637022 54637023 T C 36 GENIC homozygous 55380931 5 54636703 54636704 G - 42 GENIC heterozygous 56307491 5 54636850 54636851 C G 47 GENIC homozygous 55380930 5 54636963 54636964 C T 30 GENIC possibly homozygous 56307492 5 54637056 54637057 A C 36 GENIC homozygous 55380932 5 54637143 54637144 C A 35 GENIC possibly homozygous 55380934 5 54637271 54637272 G GA 43 GENIC homozygous 55380935 5 54637433 54637434 A G 55 GENIC homozygous 55380936 5 54637862 54637863 T C 39 GENIC possibly homozygous 55380937 5 54637878 54637879 T C 38 GENIC homozygous 55380938 5 54637898 54637899 C T 47 GENIC homozygous 56307493 5 54637905 54637906 C T 47 GENIC homozygous 55380939 5 54637950 54637951 G T 46 GENIC homozygous 56217473 5 54638002 54638003 T C 44 GENIC possibly homozygous 55380941 5 54638047 54638048 A G 38 GENIC homozygous 55380942 5 54638061 54638062 T G 41 GENIC homozygous 55380943 5 54638074 54638075 T C 42 GENIC homozygous 55380944 5 54638122 54638124 TA -- 42 GENIC homozygous 55380945 5 54638224 54638225 C T 44 GENIC homozygous 55380947 5 54638349 54638350 G - 47 GENIC homozygous 55380948 5 54638428 54638429 A G 56 GENIC homozygous 55380949 5 54638441 54638442 G A 58 GENIC homozygous 55380950 5 54638465 54638466 T TC 48 GENIC homozygous 55380951 5 54638491 54638492 T C 53 GENIC homozygous 55380952 5 54638631 54638632 C T 56 GENIC homozygous 55380953 5 54638684 54638685 G A 54 GENIC homozygous 55380954 5 54638734 54638735 T C 53 GENIC possibly homozygous 55380956 5 54638764 54638765 A G 48 GENIC homozygous 55380957 5 54638911 54638912 T G 36 GENIC homozygous 55380958 5 54638946 54638947 C T 32 GENIC homozygous 55380959 5 54639040 54639041 T C 40 GENIC homozygous 56307494 5 54639041 54639042 A G 41 GENIC homozygous 56307495 5 54639214 54639215 T C 43 GENIC homozygous 55380961 5 54639328 54639329 T TC 33 GENIC homozygous 56217474 5 54639334 54639335 A G 40 GENIC homozygous 56217475 5 54639476 54639477 A T 41 GENIC homozygous 55380962 5 54639536 54639537 T C 37 GENIC homozygous 55380963 5 54639702 54639703 G T 42 GENIC heterozygous 55380964 5 54639705 54639706 C T 39 GENIC heterozygous 56307496 5 54639882 54639883 C T 54 GENIC homozygous 56307497 5 54639949 54639950 C T 65 GENIC homozygous 55380965 5 54640058 54640059 C G 49 GENIC homozygous 55380966 5 54640138 54640139 T C 30 GENIC homozygous 55380967 5 54640193 54640194 A G 25 GENIC homozygous 55380968 5 54640211 54640212 T TGAA 16 GENIC homozygous 55380969 5 54640223 54640224 A ACAC 16 GENIC homozygous 55380970 5 54640289 54640290 C CTCTGTGTG 7 GENIC homozygous 55380972 5 54640306 54640307 C T 11 GENIC homozygous 55380973 5 54640403 54640404 C T 48 GENIC homozygous 55380974 5 54640436 54640437 A AC 59 GENIC homozygous 55380975 5 54640457 54640458 T C 57 GENIC homozygous 55380976 5 54640581 54640582 A ATC 40 GENIC homozygous 55380977 5 54640587 54640588 G C 46 GENIC possibly homozygous 55380978 5 54640746 54640747 G A 42 GENIC homozygous 55380979 5 54640955 54640956 G A 37 GENIC homozygous 55380980 5 54640964 54640965 C T 38 GENIC homozygous 55380982 5 54641006 54641007 T A 39 GENIC homozygous 55380983 5 54641107 54641108 T C 39 GENIC possibly homozygous 55380986 5 54641009 54641010 A G 39 GENIC homozygous 55380984 5 54641032 54641033 T C 41 GENIC homozygous 55380985 5 54641208 54641209 A G 36 GENIC homozygous 55380987 5 54641362 54641363 A C 31 GENIC homozygous 55380988 5 54641366 54641367 A G 33 GENIC homozygous 55380989 5 54641423 54641424 C A 35 GENIC homozygous 55380990 5 54641453 54641454 A G 30 GENIC homozygous 55380991 5 54641942 54641943 C T 46 GENIC homozygous 55380992 5 54642114 54642115 A G 52 GENIC homozygous 55380995 5 54642119 54642120 T C 47 GENIC homozygous 55380996 5 54642398 54642399 A T 38 GENIC homozygous 55380997 5 54642554 54642555 G A 41 GENIC homozygous 55380998 5 54642675 54642676 C CA 19 GENIC possibly homozygous 56307498 5 54642750 54642751 A ATTGTC 17 GENIC homozygous 55381000 5 54642769 54642770 A G 25 GENIC homozygous 55381001 5 54642772 54642773 C G 25 GENIC homozygous 55381002 5 54642975 54642976 T - 41 GENIC homozygous 55381003 5 54642991 54642992 A T 47 GENIC possibly homozygous 55381004 5 54643324 54643325 T TAAA 3 GENIC homozygous 56307499 5 54643538 54643539 C CT 14 GENIC possibly homozygous 56307500 5 54643596 54643597 A G 17 GENIC homozygous 55381007 5 54643636 54643637 T G 22 GENIC homozygous 55381008 5 54643681 54643682 C A 26 GENIC homozygous 55381009 5 54643690 54643691 A - 20 GENIC homozygous 55381010 5 54643734 54643735 T C 22 GENIC homozygous 55381011 5 54643755 54643756 C T 21 GENIC homozygous 55381012 5 54643780 54643781 G A 24 GENIC homozygous 55381013 5 54643792 54643800 CACAAAAA -------- 18 GENIC homozygous 55381014 5 54644070 54644071 T TTAA 37 GENIC homozygous 55381016 5 54644345 54644346 C T 33 GENIC homozygous 55381018