chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 121536701 121536704 AAT --- 20 GENIC homozygous 55676961 5 121537160 121537161 C T 24 GENIC homozygous 55676963 5 121537591 121537592 G GT 19 GENIC possibly homozygous 55676965 5 121538376 121538377 A AATC 21 GENIC homozygous 55676967 5 121540425 121540426 T TCA 39 GENIC homozygous 55676969 5 121540434 121540435 C CA 39 GENIC possibly homozygous 55676971 5 121541101 121541102 A G 33 GENIC homozygous 55676973 5 121541433 121541434 C T 48 GENIC possibly homozygous 55676975 5 121541478 121541479 A AC 25 GENIC heterozygous 55676977 5 121541479 121541480 A C 39 GENIC possibly homozygous 55676979 5 121541479 121541480 A AC 21 GENIC heterozygous 55676981 5 121541913 121541914 C T 27 GENIC homozygous 55676983 5 121542165 121542166 A G 30 GENIC possibly homozygous 55676985 5 121542679 121542680 T - 34 GENIC homozygous 55676987 5 121542837 121542838 A G 38 GENIC homozygous 55676989 5 121543882 121543883 A ACGG 2 GENIC homozygous 55676991 5 121543883 121543884 T C 8 GENIC possibly homozygous 55676993 5 121544217 121544219 GG -- 10 GENIC homozygous 55676995 5 121544338 121544339 A G 18 GENIC heterozygous 55676997 5 121546594 121546596 GG -- 3 GENIC heterozygous 55676999 5 121546595 121546596 G - 3 GENIC heterozygous 55677001 5 121547523 121547524 C T 41 GENIC homozygous 55677003 5 121550290 121550291 A AT 3 GENIC homozygous 55677005 5 121550310 121550311 T - 2 GENIC homozygous 55677007 5 121550330 121550331 A AAT 2 GENIC homozygous 55677009 5 121550415 121550416 A AGGG 5 GENIC heterozygous 55677011 5 121550415 121550416 A AGG 5 GENIC heterozygous 55677013 5 121550957 121550958 A AC 14 GENIC heterozygous 55677015 5 121550959 121550960 A AAACAAAAAAAAC 8 GENIC homozygous 55677018 5 121551437 121551438 C T 29 GENIC homozygous 55677020 5 121551469 121551470 T C 30 GENIC homozygous 55677022 5 121553007 121553008 T A 32 GENIC homozygous 55677024 5 121554547 121554548 C T 58 GENIC homozygous 55677026 5 121556295 121556296 A AT 21 GENIC homozygous 55677028 5 121556329 121556330 T C 27 GENIC homozygous 55677030 5 121557304 121557307 ATG --- 7 GENIC homozygous 55677032 5 121557455 121557456 G T 13 GENIC homozygous 55677034 5 121559413 121559414 T C 27 GENIC homozygous 55677036 5 121560182 121560183 C T 90 GENIC heterozygous 55677038 5 121560243 121560244 T G 116 GENIC heterozygous 55677040 5 121561265 121561266 C G 24 GENIC homozygous 55677042 5 121561884 121561885 T C 37 GENIC homozygous 55677044 5 121562405 121562406 A ACACG 34 GENIC heterozygous 55677046 5 121562826 121562827 A G 25 GENIC homozygous 55677048 5 121563117 121563118 A G 29 GENIC homozygous 55677050 5 121563339 121563340 T C 54 GENIC homozygous 55677052 5 121563917 121563918 T G 44 GENIC homozygous 55677054 5 121565230 121565231 T G 18 GENIC heterozygous 55677056 5 121565242 121565243 G - 13 GENIC heterozygous 55677058 5 121565242 121565243 G GTT 11 GENIC homozygous 55677060 5 121565244 121565245 T TG 18 GENIC heterozygous 55677062 5 121566290 121566291 C T 16 GENIC possibly homozygous 55677064 5 121567784 121567785 A G 44 GENIC possibly homozygous 55677066 5 121567878 121567879 C T 34 GENIC homozygous 55677068 5 121568148 121568149 G A 35 GENIC homozygous 55677070 5 121568163 121568164 C T 38 GENIC homozygous 55677072 5 121568247 121568248 A T 50 GENIC homozygous 55677074 5 121568504 121568505 A AGC 31 GENIC homozygous 55677076 5 121568511 121568512 G A 36 GENIC homozygous 55677078 5 121568554 121568555 G A 32 GENIC homozygous 55677080 5 121568678 121568679 C T 27 GENIC homozygous 55677082 5 121568680 121568681 C A 26 GENIC possibly homozygous 55677084 5 121568723 121568724 C CCT 1 GENIC homozygous 55677086 5 121569702 121569703 T G 19 GENIC possibly homozygous 55677088 5 121569707 121569708 C - 16 GENIC homozygous 55677090 5 121569940 121569941 A T 51 GENIC homozygous 55677092 5 121571050 121571051 T TA 29 GENIC homozygous 55677094 5 121575478 121575479 T TTTG 13 GENIC homozygous 55677096 5 121576018 121576019 G A 36 GENIC homozygous 55677098 5 121576116 121576143 TATATATATATATATATATACATATAT --------------------------- 1 GENIC homozygous 55677100 5 121578772 121578773 A G 43 GENIC homozygous 55677102 5 121580083 121580084 A - 24 GENIC homozygous 55677104 5 121580535 121580536 T C 41 GENIC homozygous 55677106 5 121580609 121580610 C T 39 GENIC homozygous 55677108 5 121580796 121580797 G A 36 GENIC homozygous 55677110 5 121582572 121582573 T C 49 GENIC homozygous 55677112 5 121582758 121582759 T C 35 GENIC homozygous 55677114 5 121583257 121583258 A G 22 GENIC possibly homozygous 55677116 5 121583265 121583266 A AG 11 GENIC possibly homozygous 55677118 5 121583266 121583267 C G 20 GENIC heterozygous 55677120 5 121583596 121583597 C T 32 GENIC homozygous 55677130 5 121583271 121583272 C A 19 GENIC possibly homozygous 55677122 5 121583273 121583274 C A 20 GENIC possibly homozygous 55677124 5 121583275 121583276 C A 19 GENIC possibly homozygous 55677126 5 121583441 121583442 G A 19 GENIC homozygous 55677128 5 121583650 121583651 A AT 26 GENIC homozygous 55677132 5 121584416 121584417 G T 11 GENIC homozygous 55677134 5 121585338 121585339 A C 47 GENIC homozygous 55677136 5 121586034 121586035 G A 13 GENIC homozygous 55677138 5 121586040 121586041 G C 16 GENIC homozygous 55677140 5 121586840 121586841 T G 47 GENIC heterozygous 55677142 5 121586858 121586859 A C 34 GENIC heterozygous 55677144 5 121586858 121586859 A T 41 GENIC heterozygous 55677146 5 121586863 121586864 C CT 2 GENIC heterozygous 55677148 5 121586921 121586922 T C 65 GENIC heterozygous 55677150 5 121588636 121588637 T G 45 GENIC heterozygous 55677152 5 121589144 121589145 G A 25 GENIC homozygous 55677154 5 121589240 121589241 C T 36 GENIC homozygous 55677156 5 121589756 121589757 G T 124 GENIC heterozygous 55677158 5 121589786 121589787 C T 153 GENIC heterozygous 55677160 5 121589796 121589797 G T 160 GENIC heterozygous 55677162 5 121589866 121589867 C T 101 GENIC heterozygous 55677164 5 121589873 121589874 G A 92 GENIC heterozygous 55677166 5 121589902 121589903 A G 82 GENIC heterozygous 55677168 5 121590084 121590085 T G 83 GENIC possibly homozygous 55677170 5 121590132 121590133 G A 100 GENIC heterozygous 55677172 5 121590139 121590140 G A 88 GENIC heterozygous 55677174 5 121590204 121590205 G T 43 GENIC heterozygous 55677176 5 121590219 121590220 A G 34 GENIC heterozygous 55677178 5 121590234 121590235 C T 34 GENIC heterozygous 55677180 5 121590495 121590496 C T 47 GENIC homozygous 55677182 5 121590638 121590646 TCATGAGT -------- 3 GENIC heterozygous 55677184 5 121590645 121590646 T TGG 2 GENIC homozygous 55677186 5 121590794 121590803 GCTGAGCAA --------- 3 GENIC homozygous 55677188 5 121590798 121590807 AGCAAGCTA --------- 3 GENIC homozygous 55677190 5 121591149 121591151 GT -- 21 GENIC homozygous 55677192 5 121591152 121591155 TTG --- 20 GENIC homozygous 55677194 5 121591328 121591329 A C 55 GENIC homozygous 55677196 5 121591409 121591410 C T 24 GENIC homozygous 55677198 5 121591827 121591835 ACACACAC -------- 5 GENIC homozygous 55677200 5 121591960 121591961 C T 31 GENIC homozygous 55677202 5 121592165 121592166 T TA 36 GENIC homozygous 55677204 5 121595243 121595244 C T 33 GENIC homozygous 55677206 5 121596870 121596871 G A 29 GENIC homozygous 55677208 5 121597418 121597419 G T 31 GENIC homozygous 55677210 5 121602242 121602245 CCC --- 4 GENIC homozygous 55677222 5 121597481 121597482 T C 36 GENIC possibly homozygous 55677212 5 121597892 121597893 A - 1 GENIC homozygous 55677214 5 121598205 121598206 A G 50 GENIC homozygous 55677216 5 121600409 121600410 G GT 41 GENIC homozygous 55677218 5 121601181 121601182 A C 53 GENIC homozygous 55677220 5 121602682 121602683 T A 36 GENIC homozygous 55677224 5 121602807 121602808 C T 32 GENIC homozygous 55677226 5 121603734 121603735 C T 31 GENIC homozygous 55677228 5 121605792 121605794 GG -- 3 GENIC heterozygous 55677230 5 121605793 121605794 G - 3 GENIC heterozygous 55677232 5 121606072 121606073 C T 45 GENIC homozygous 55677233 5 121606291 121606292 A G 32 GENIC homozygous 55677235 5 121606663 121606664 G A 19 GENIC homozygous 55677237 5 121607172 121607173 A C 47 GENIC homozygous 55677239 5 121607288 121607289 A G 28 GENIC homozygous 55677241 5 121607347 121607348 C T 25 GENIC homozygous 55677243 5 121607414 121607415 A - 40 GENIC homozygous 55677245 5 121608116 121608117 A AGG 27 GENIC homozygous 55677247 5 121608532 121608533 C T 40 GENIC homozygous 55677249 5 121608618 121608619 C T 23 GENIC homozygous 55677251 5 121609230 121609231 T C 48 GENIC homozygous 55677253 5 121609539 121609540 C T 36 GENIC possibly homozygous 55677255 5 121610111 121610112 A - 1 GENIC homozygous 55677257 5 121610378 121610379 C CAAAAAA 1 GENIC homozygous 55677259 5 121610591 121610592 T C 64 GENIC homozygous 55677261 5 121610698 121610699 A G 73 GENIC possibly homozygous 55677263 5 121613032 121613033 A ATGTG 22 GENIC homozygous 55677265 5 121613570 121613571 C T 43 GENIC possibly homozygous 55677267 5 121616272 121616273 G A 65 GENIC homozygous 55677269 5 121616802 121616803 T TTTTG 46 GENIC homozygous 55677271 5 121616897 121616898 A T 43 GENIC homozygous 55677273 5 121616975 121616979 TTTC ---- 36 GENIC homozygous 55677275 5 121616983 121616986 TTT --- 38 GENIC heterozygous 55677277 5 121616987 121616988 T - 37 GENIC heterozygous 55677279 5 121619349 121619350 A - 15 GENIC homozygous 55677281 5 121621289 121621290 A G 25 GENIC homozygous 55677283 5 121623090 121623091 G A 19 GENIC homozygous 55677285 5 121624301 121624302 A AG 36 GENIC homozygous 55677287 5 121624303 121624304 G GA 36 GENIC homozygous 55677289 5 121629522 121629523 A ATT 13 GENIC homozygous 55677291 5 121629593 121629594 C T 31 GENIC homozygous 55677293 5 121629929 121629930 C A 40 GENIC homozygous 55677295 5 121630636 121630637 G A 24 GENIC homozygous 55677297 5 121632091 121632092 G A 32 GENIC possibly homozygous 55677299 5 121632829 121632830 A G 77 GENIC heterozygous 55677301 5 121632862 121632863 G A 42 GENIC heterozygous 55677303 5 121632908 121632909 A G 105 GENIC heterozygous 55677305 5 121632914 121632915 C - 28 GENIC heterozygous 55677307 5 121632980 121632981 C T 248 GENIC heterozygous 55677315 5 121632928 121632929 C T 176 GENIC heterozygous 55677309 5 121632934 121632935 A G 195 GENIC heterozygous 55677311 5 121632954 121632955 C T 248 GENIC heterozygous 55677313 5 121633058 121633059 C T 173 GENIC heterozygous 55677317 5 121633084 121633085 C T 86 GENIC heterozygous 55677319 5 121633090 121633091 A G 66 GENIC heterozygous 55677321 5 121633278 121633279 T C 46 GENIC homozygous 55677323 5 121633668 121633669 A AG 17 GENIC homozygous 55677325 5 121634082 121634083 C G 55 GENIC heterozygous 55677327 5 121635276 121635277 G A 33 GENIC homozygous 55677329 5 121635308 121635309 C CCA 32 GENIC homozygous 55677331 5 121635346 121635347 C A 36 GENIC possibly homozygous 55677333 5 121635348 121635349 C A 36 GENIC possibly homozygous 55677335 5 121636339 121636340 G T 47 GENIC homozygous 55677337 5 121637945 121637946 A AT 26 GENIC homozygous 55677339 5 121641323 121641324 C - 17 GENIC homozygous 55677341 5 121641554 121641555 C T 27 GENIC homozygous 55677343 5 121641568 121641569 A G 23 GENIC homozygous 55677345 5 121642448 121642449 C A 36 GENIC homozygous 55677347 5 121643501 121643502 C T 44 GENIC homozygous 55677349 5 121644804 121644805 T A 10 GENIC homozygous 55677351 5 121644927 121644928 C T 18 GENIC homozygous 55677353 5 121645322 121645323 A G 50 GENIC homozygous 55677355 5 121646209 121646210 T C 36 GENIC possibly homozygous 55677357 5 121646332 121646333 G A 39 GENIC homozygous 55677359 5 121646397 121646398 C A 49 GENIC homozygous 55677361 5 121646790 121646791 A - 42 GENIC homozygous 55677363 5 121647103 121647104 G A 35 GENIC homozygous 55677365 5 121648027 121648028 C T 29 GENIC homozygous 55677367 5 121648223 121648224 G - 42 GENIC homozygous 55677369 5 121648372 121648373 T - 17 GENIC possibly homozygous 55677371 5 121648384 121648387 TTC --- 22 GENIC homozygous 55677373 5 121649151 121649152 C - 4 GENIC homozygous 55677375 5 121649715 121649716 C T 42 GENIC homozygous 55677377 5 121650440 121650441 C - 30 GENIC homozygous 55677379 5 121650565 121650566 A C 29 GENIC homozygous 55677381 5 121652628 121652629 A - 32 GENIC possibly homozygous 55677383 5 121653219 121653220 G GCA 30 GENIC possibly homozygous 55677385 5 121654091 121654092 T - 22 GENIC homozygous 55677387 5 121654509 121654510 C G 49 GENIC homozygous 55677389 5 121655010 121655011 G A 26 GENIC homozygous 55677391 5 121655544 121655545 G C 43 GENIC homozygous 55677393 5 121655734 121655735 C T 48 GENIC homozygous 55677395 5 121655802 121655803 C A 36 GENIC homozygous 55677397 5 121655876 121655877 G A 21 GENIC homozygous 55677399 5 121655878 121655882 ATGG ---- 20 GENIC homozygous 55677401 5 121655901 121655902 G A 16 GENIC homozygous 55677403 5 121656441 121656442 C T 72 GENIC homozygous 55677405 5 121656837 121656838 T C 9 GENIC possibly homozygous 55677407 5 121656850 121656870 ATATATATATATATATATAC -------------------- 8 GENIC possibly homozygous 55677409 5 121658158 121658159 T A 19 GENIC homozygous 55677411 5 121660956 121660957 C - 24 GENIC homozygous 55677413 5 121661565 121661566 A T 41 GENIC homozygous 55677415 5 121663479 121663480 T TC 24 GENIC homozygous 55677425 5 121661805 121661806 G A 40 GENIC homozygous 55677417 5 121662845 121662846 C CCACACA 9 GENIC homozygous 55677419 5 121662866 121662870 CACT ---- 25 GENIC heterozygous 55677421 5 121662869 121662870 T A 34 GENIC possibly homozygous 55677423 5 121664778 121664779 G GT 50 GENIC homozygous 55677427 5 121665709 121665710 A G 46 GENIC homozygous 55677429 5 121665822 121665823 G A 48 GENIC homozygous 55677431 5 121665910 121665911 A G 30 GENIC possibly homozygous 55677433 5 121665920 121665921 G T 27 GENIC heterozygous 55677435 5 121666625 121666626 C T 24 GENIC homozygous 55677437 5 121667510 121667511 C A 33 GENIC homozygous 55677439 5 121668616 121668624 ATGTATGT -------- 14 GENIC possibly homozygous 55677441 5 121669138 121669139 G - 25 GENIC homozygous 55677443 5 121669439 121669441 AA -- 10 GENIC heterozygous 55677445 5 121669456 121669457 A G 15 GENIC heterozygous 55677447 5 121669865 121669866 G A 53 GENIC homozygous 55677449 5 121670242 121670243 C T 18 GENIC possibly homozygous 55677451 5 121670749 121670750 G A 29 GENIC possibly homozygous 55677453 5 121670769 121670770 T A 27 GENIC homozygous 55677455 5 121671568 121671569 A G 60 GENIC homozygous 55677457 5 121671832 121671833 G A 28 GENIC possibly homozygous 55677459 5 121671836 121671837 G GAA 22 GENIC homozygous 55677461 5 121671846 121671847 G A 27 GENIC possibly homozygous 55677463 5 121672202 121672205 TTT --- 11 GENIC homozygous 55677465 5 121672425 121672426 C A 23 GENIC homozygous 55677467 5 121674883 121674884 A G 48 GENIC homozygous 55677469 5 121676026 121676027 C T 31 GENIC possibly homozygous 55677471 5 121676123 121676124 C G 36 GENIC possibly homozygous 55677473 5 121676125 121676126 G GAGAC 18 GENIC possibly homozygous 55677475 5 121678110 121678111 C G 18 GENIC homozygous 55677477 5 121678421 121678422 G T 33 GENIC homozygous 55677479 5 121678506 121678507 A AACACACACAC 13 GENIC homozygous 55677481 5 121679111 121679112 A G 23 GENIC homozygous 55677483 5 121679423 121679424 C CACA 35 GENIC homozygous 55677485 5 121680233 121680234 G A 38 GENIC homozygous 55677487 5 121680312 121680313 T A 49 GENIC homozygous 55677489 5 121681531 121681532 T C 10 GENIC possibly homozygous 55677491 5 121681537 121681538 A - 2 GENIC homozygous 55677493 5 121682471 121682472 G A 45 GENIC homozygous 55677495 5 121682728 121682729 C T 40 GENIC possibly homozygous 55677497 5 121682771 121682779 AAAAAAAA -------- 1 GENIC homozygous 55677499 5 121682834 121682835 G A 41 GENIC possibly homozygous 55677501 5 121683317 121683318 C T 27 GENIC heterozygous 55677503 5 121683340 121683341 G A 16 GENIC heterozygous 55677505 5 121683408 121683409 A - 12 GENIC possibly homozygous 55677507 5 121683417 121683418 A T 12 GENIC homozygous 55677509 5 121683419 121683420 A T 12 GENIC homozygous 55677511 5 121683443 121683444 T A 13 GENIC homozygous 55677513 5 121683571 121683572 C - 18 GENIC homozygous 55677515 5 121683578 121683579 C - 21 GENIC homozygous 55677517 5 121683786 121683787 C CT 14 GENIC possibly homozygous 55677519 5 121684168 121684169 T C 41 GENIC homozygous 55677521 5 121684540 121684541 G A 38 GENIC homozygous 55677523 5 121684751 121684752 G GAA 7 GENIC heterozygous 55677525 5 121684751 121684752 G GA 7 GENIC heterozygous 55677527 5 121685093 121685094 T C 16 GENIC homozygous 55677529 5 121685359 121685360 T A 26 GENIC homozygous 55677531 5 121686441 121686442 T C 47 GENIC homozygous 55677533 5 121690633 121690634 A G 61 GENIC homozygous 55677541 5 121687519 121687520 T TATAAATAA 3 GENIC homozygous 55677535 5 121687651 121687652 C T 23 GENIC homozygous 55677537 5 121687657 121687658 T - 23 GENIC homozygous 55677539 5 121691399 121691400 G GTC 10 GENIC homozygous 55677543 5 121691417 121691418 A G 23 GENIC homozygous 55677545 5 121692224 121692254 AGGGGTATGGGATAGGGGGGGGAGGGGAAC ------------------------------ 6 GENIC heterozygous 55677547 5 121692477 121692478 A T 26 GENIC homozygous 55677549 5 121692790 121692791 C T 38 GENIC homozygous 55677551 5 121695272 121695273 G A 47 GENIC homozygous 55677553 5 121695643 121695645 TT -- 8 GENIC homozygous 55677555 5 121697337 121697338 C G 14 GENIC heterozygous 55677557 5 121697342 121697343 C G 14 GENIC heterozygous 55677559 5 121698986 121698987 G GTGT 13 GENIC homozygous 55677561 5 121699125 121699126 T A 18 GENIC homozygous 55677563 5 121699975 121699976 A - 21 GENIC possibly homozygous 55677565 5 121702469 121702470 C T 26 GENIC homozygous 55677573 5 121700108 121700109 G A 21 GENIC homozygous 55677567 5 121701085 121701086 T G 51 GENIC homozygous 55677569 5 121702252 121702253 A C 32 GENIC homozygous 55677571 5 121704392 121704393 C T 29 GENIC homozygous 55677575 5 121704682 121704685 TCT --- 31 GENIC homozygous 55677577 5 121704912 121704913 C T 71 GENIC homozygous 55677579 5 121705392 121705393 C G 53 GENIC homozygous 55677581 5 121705690 121705698 CAGTAATA -------- 5 GENIC homozygous 55677583 5 121706086 121706087 T C 63 GENIC homozygous 55677585 5 121707916 121707917 A - 3 GENIC homozygous 55677587 5 121708022 121708032 GTGTGTGTGT ---------- 11 GENIC homozygous 55677589 5 121708030 121708044 GTGTGTGTGTGAGA -------------- 12 GENIC possibly homozygous 55677591 5 121708280 121708281 T A 23 GENIC homozygous 55677593 5 121708361 121708362 A G 31 GENIC homozygous 55677595 5 121709092 121709093 T C 35 GENIC homozygous 55677597 5 121709176 121709179 AAA --- 21 GENIC homozygous 55677599 5 121709443 121709444 A C 40 GENIC homozygous 55677601 5 121710118 121710119 G C 46 GENIC homozygous 55677603 5 121712275 121712276 G GCACA 24 GENIC homozygous 55677605 5 121712289 121712290 G A 37 GENIC heterozygous 55677607 5 121712313 121712314 T A 36 GENIC heterozygous 55677609 5 121712321 121712322 T G 36 GENIC heterozygous 55677611 5 121712321 121712322 T TCG 31 GENIC heterozygous 55677613 5 121713461 121713462 C - 55 GENIC homozygous 55677615 5 121713683 121713684 A G 43 GENIC homozygous 55677617 5 121713730 121713731 C A 43 GENIC homozygous 55677619 5 121713751 121713752 G A 42 GENIC homozygous 55677621 5 121714132 121714133 A G 69 GENIC homozygous 55677623 5 121714902 121714906 AAAA ---- 5 GENIC heterozygous 55677625 5 121715041 121715042 A AACCAG 13 GENIC homozygous 55677627 5 121715044 121715045 T TG 9 GENIC homozygous 55677629 5 121715415 121715417 GA -- 2 GENIC homozygous 55677631 5 121715416 121715417 A - 1 GENIC homozygous 55677633 5 121717120 121717121 C T 30 GENIC homozygous 55677635 5 121717255 121717257 AC -- 21 GENIC homozygous 55677637 5 121717620 121717621 T TTTTAAA 11 GENIC homozygous 55677639 5 121717622 121717623 G - 7 GENIC homozygous 55677641 5 121717985 121717986 G A 47 GENIC homozygous 55677643 5 121718048 121718049 C T 57 GENIC homozygous 55677645