chr start stop reference nuc variant nuc depth genic status zygosity variant ID 4 154310366 154310378 TCTCTCTCTCTC ------------ 11 INTERGENIC homozygous 58476372 4 154310540 154310541 T C 17 INTERGENIC homozygous 56990338 4 154310600 154310601 C T 32 INTERGENIC homozygous 56990339 4 154310751 154310752 C A 19 INTERGENIC homozygous 56990340 4 154311112 154311113 G A 19 INTERGENIC homozygous 56990341 4 154311148 154311149 T A 14 INTERGENIC homozygous 56990342 4 154311203 154311204 C T 2 INTERGENIC homozygous 56990343 4 154311426 154311427 T A 2 INTERGENIC homozygous 56990344 4 154311429 154311430 T C 2 INTERGENIC homozygous 56990345 4 154311704 154311705 A G 9 INTERGENIC homozygous 56990349 4 154311723 154311724 C T 9 INTERGENIC homozygous 56990350 4 154311756 154311757 G A 15 INTERGENIC homozygous 56990351 4 154311802 154311803 T A 18 INTERGENIC homozygous 56990352 4 154311826 154311827 C T 26 INTERGENIC homozygous 56990353 4 154311941 154311942 C G 29 INTERGENIC homozygous 56990354 4 154312325 154312326 C A 32 INTERGENIC homozygous 57523202 4 154312598 154312599 A G 22 INTERGENIC homozygous 57523204 4 154312637 154312638 A G 22 INTERGENIC homozygous 56990356 4 154312691 154312692 A T 22 INTERGENIC homozygous 56990357 4 154313129 154313130 T A 30 INTERGENIC homozygous 56990358 4 154313272 154313273 A T 20 INTERGENIC homozygous 56990359 4 154313414 154313415 A G 19 INTERGENIC homozygous 56990360 4 154313440 154313441 C T 16 INTERGENIC homozygous 56990361 4 154313731 154313732 C T 11 INTERGENIC homozygous 56990362 4 154314210 154314211 G C 22 INTERGENIC homozygous 56990363 4 154314257 154314258 A T 21 INTERGENIC homozygous 56990364 4 154314619 154314620 G A 24 INTERGENIC homozygous 56990365 4 154314718 154314719 C T 16 INTERGENIC homozygous 56990366 4 154314779 154314780 A G 24 INTERGENIC homozygous 56990367 4 154315039 154315040 T TGGTTCTTTTTTTTTG 10 INTERGENIC homozygous 56990369 4 154315077 154315078 T C 16 INTERGENIC homozygous 56990370 4 154315122 154315123 A G 20 INTERGENIC homozygous 56990371 4 154315204 154315207 CCA --- 5 INTERGENIC homozygous 58476376 4 154315213 154315261 TCCTCCCCATCCTCCTCCTCATCCTCCTCCTCATCCTCCTCCTCCTCA ------------------------------------------------ 3 INTERGENIC heterozygous 58476378 4 154315308 154315309 C CCT 4 INTERGENIC homozygous 56990375 4 154315343 154315344 C G 4 INTERGENIC homozygous 56990377 4 154315477 154315478 C T 2 INTERGENIC homozygous 56990378 4 154315639 154315640 C T 12 INTERGENIC homozygous 57523206 4 154315662 154315663 A G 9 INTERGENIC homozygous 56990379 4 154315937 154315938 G A 23 INTERGENIC homozygous 56990381 4 154316188 154316189 T A 25 INTERGENIC homozygous 56990382 4 154316251 154316252 A C 29 INTERGENIC homozygous 56990383 4 154316452 154316453 A G 22 INTERGENIC homozygous 56990384 4 154316497 154316498 G T 17 INTERGENIC homozygous 56990385 4 154316499 154316500 A T 16 INTERGENIC homozygous 56990386 4 154316538 154316539 T C 15 INTERGENIC homozygous 57523208 4 154317732 154317733 T C 25 INTERGENIC homozygous 57523210 4 154317893 154317894 G GAA 28 INTERGENIC possibly homozygous 56990387 4 154317893 154317894 G GA 28 INTERGENIC heterozygous 58510121 4 154318202 154318203 T A 26 INTERGENIC homozygous 56990388 4 154318262 154318263 G C 26 INTERGENIC homozygous 56990389 4 154318420 154318421 G T 20 INTERGENIC homozygous 56990390 4 154318697 154318698 T C 14 INTERGENIC homozygous 56990391 4 154319620 154319621 A T 25 INTERGENIC homozygous 56990392 4 154319633 154319634 A T 19 INTERGENIC homozygous 57523212 4 154319959 154319960 T C 21 INTERGENIC homozygous 56990393 4 154320488 154320489 T C 27 INTERGENIC homozygous 56990394 4 154321210 154321211 C T 19 INTERGENIC homozygous 56990395 4 154322193 154322194 C T 27 INTERGENIC homozygous 56990396 4 154322282 154322283 C T 16 INTERGENIC homozygous 56990397 4 154322556 154322557 T C 21 INTERGENIC homozygous 56990398 4 154322885 154322886 A C 28 INTERGENIC homozygous 56990399 4 154323094 154323095 T C 25 INTERGENIC homozygous 56990400 4 154323634 154323636 TC -- 15 INTERGENIC homozygous 56990401 4 154324662 154324663 T TTTAGATATTTGTC 20 INTERGENIC homozygous 57523214 4 154324685 154324686 A T 21 INTERGENIC homozygous 57523216 4 154324807 154324808 C A 27 INTERGENIC homozygous 57523218 4 154325286 154325287 T C 15 INTERGENIC homozygous 56990403 4 154325695 154325696 A G 12 INTERGENIC homozygous 57523220 4 154325781 154325782 C CAAAAAAAAAAAAAAAAA 3 INTERGENIC homozygous 58567857 4 154326017 154326018 C CTT 4 INTERGENIC heterozygous 58445065 4 154326572 154326573 A AGCATCCCT 16 INTERGENIC homozygous 56990408 4 154327441 154327450 TGTTGTTGT --------- 12 INTERGENIC homozygous 58476380 4 154327524 154327525 A G 28 INTERGENIC homozygous 57523224 4 154328611 154328612 A AT 19 INTERGENIC possibly homozygous 57523226 4 154328658 154328659 C T 15 INTERGENIC homozygous 56990414 4 154329496 154329606 ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTTGTTGTTGTTGTTGTTGTTTTCTTAGAAAACATGTACCACATTTTCTTAGAA -------------------------------------------------------------------------------------------------------------- 10 INTERGENIC homozygous 58347719 4 154330584 154330585 T A 24 INTERGENIC homozygous 56990416 4 154330606 154330607 A - 20 INTERGENIC homozygous 57523228 4 154331552 154331553 A T 24 INTERGENIC homozygous 56990418 4 154331656 154331657 T A 24 INTERGENIC homozygous 56990419 4 154331671 154331672 T C 22 INTERGENIC homozygous 56990420 4 154331812 154331813 G C 21 INTERGENIC homozygous 56990421 4 154331861 154331869 GTGTTTGG -------- 5 INTERGENIC homozygous 58595107 4 154331987 154331988 G T 17 INTERGENIC homozygous 56990423 4 154332134 154332135 G A 24 INTERGENIC homozygous 56990424 4 154332163 154332164 T C 23 INTERGENIC homozygous 56990425 4 154332165 154332167 AC -- 22 INTERGENIC homozygous 56990426 4 154332243 154332244 G A 27 INTERGENIC homozygous 56990427 4 154332901 154332902 A G 19 INTERGENIC homozygous 56990429 4 154333039 154333040 A - 25 INTERGENIC homozygous 56990430 4 154333109 154333110 G A 21 INTERGENIC homozygous 56990431 4 154333499 154333500 A G 9 INTERGENIC homozygous 57523230 4 154333521 154333522 C CA 2 INTERGENIC homozygous 57523232 4 154339491 154339492 G C 8 INTERGENIC homozygous 56990434 4 154339612 154339613 T G 9 INTERGENIC homozygous 57523236 4 154328611 154328612 A ATT 19 INTERGENIC heterozygous 58672988 4 154339658 154339659 C A 5 INTERGENIC homozygous 56990435 4 154339688 154339689 G A 8 INTERGENIC homozygous 56990436 4 154339789 154339790 T C 17 INTERGENIC homozygous 56990437 4 154339909 154339910 G GA 15 INTERGENIC homozygous 56990438 4 154341070 154341071 C G 30 INTERGENIC homozygous 56990439 4 154341295 154341296 G T 17 INTERGENIC homozygous 56990440 4 154342157 154342158 A - 8 INTERGENIC homozygous 56990441 4 154342253 154342254 G GA 11 INTERGENIC homozygous 56990442 4 154342340 154342341 T TG 11 INTERGENIC homozygous 56990443 4 154342555 154342561 ACAGAC ------ 1 INTERGENIC homozygous 58672990 4 154342924 154342925 A C 19 INTERGENIC homozygous 57523238 4 154343201 154343202 G A 16 INTERGENIC homozygous 56990451 4 154344391 154344392 A G 22 INTERGENIC homozygous 56990455 4 154343861 154343862 C G 15 INTERGENIC homozygous 56990452 4 154344009 154344010 G A 16 INTERGENIC homozygous 56990453 4 154344194 154344197 CTT --- 11 INTERGENIC homozygous 56990454 4 154344536 154344537 T A 5 INTERGENIC homozygous 57523242 4 154344605 154344606 G A 14 INTERGENIC homozygous 56990456 4 154344736 154344737 G - 20 INTERGENIC homozygous 56990457 4 154344840 154344841 C T 9 INTERGENIC homozygous 56990458 4 154345109 154345110 C A 21 INTERGENIC homozygous 56990459 4 154345247 154345248 G A 22 INTERGENIC homozygous 57523246 4 154345396 154345397 T TG 21 INTERGENIC homozygous 56990460 4 154345736 154345737 A T 24 INTERGENIC homozygous 56990461 4 154345763 154345764 C T 21 INTERGENIC homozygous 56990462 4 154346006 154346007 C T 36 INTERGENIC homozygous 56990463 4 154346214 154346215 C A 17 INTERGENIC homozygous 56990465 4 154346334 154346335 T C 22 INTERGENIC homozygous 56990467 4 154346374 154346375 G A 18 INTERGENIC homozygous 56990468 4 154347272 154347273 G C 19 INTERGENIC homozygous 56990469 4 154347473 154347474 G T 11 INTERGENIC homozygous 57523248 4 154348244 154348245 T C 28 INTERGENIC homozygous 56990472 4 154348473 154348474 C A 34 INTERGENIC homozygous 57523250 4 154348752 154348753 A T 26 INTERGENIC homozygous 56990474 4 154350710 154350711 C G 6 INTERGENIC homozygous 56990475 4 154352308 154352309 G A 18 INTERGENIC homozygous 56990479 4 154353654 154353655 A C 16 INTERGENIC homozygous 56990482 4 154353978 154353979 T C 9 GENIC homozygous 56990484 4 154354859 154354860 G A 23 GENIC homozygous 57523254 4 154354881 154354882 C T 23 GENIC homozygous 57523256 4 154354885 154354886 G T 24 GENIC homozygous 56990486 4 154355937 154355938 T C 25 GENIC homozygous 56990487 4 154357606 154357607 T - 19 INTERGENIC homozygous 56990488 4 154357608 154357609 A - 19 INTERGENIC homozygous 56990489 4 154357694 154357695 C T 26 INTERGENIC homozygous 57523258 4 154358029 154358030 G A 41 INTERGENIC homozygous 56990490 4 154358144 154358145 A G 13 INTERGENIC homozygous 56990491 4 154358401 154358402 C CTTTTTTT 4 INTERGENIC homozygous 58476386 4 154358422 154358423 G A 21 INTERGENIC homozygous 56990492 4 154358601 154358611 GTTTAGCACT ---------- 21 INTERGENIC homozygous 56990493 4 154358634 154358635 A G 23 INTERGENIC homozygous 56990494 4 154358707 154358708 T C 28 INTERGENIC homozygous 56990495