chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 145031639 145031640 C CAGACGG 51 GENIC homozygous 57715134 3 145031640 145031641 T TTGTGTGC 50 GENIC homozygous 57715135 3 145031826 145031827 A - 3 GENIC heterozygous 58220314 3 145032963 145032964 G A 33 GENIC homozygous 58398264 3 145033079 145033080 C T 33 GENIC homozygous 58398265 3 145034041 145034042 G A 27 GENIC homozygous 58398266 3 145034481 145034482 C G 17 GENIC homozygous 58398267 3 145034786 145034787 A G 19 GENIC homozygous 58398268 3 145035025 145035027 GT -- 23 GENIC possibly homozygous 57715138 3 145035247 145035248 C T 37 GENIC homozygous 58398269 3 145035436 145035437 C A 20 GENIC homozygous 58398270 3 145035507 145035508 C T 15 GENIC homozygous 58398271 3 145035848 145035849 T A 40 GENIC homozygous 58398272 3 145035873 145035874 C A 42 GENIC homozygous 58398273 3 145036485 145036486 C T 17 GENIC homozygous 58398274 3 145036614 145036615 A G 30 GENIC homozygous 58398275 3 145036713 145036714 C CT 28 GENIC homozygous 57715141 3 145036782 145036783 G A 19 GENIC homozygous 58398276 3 145036799 145036800 G A 20 GENIC homozygous 58398277 3 145036839 145036840 A T 23 GENIC homozygous 58398278 3 145036840 145036841 T TA 23 GENIC homozygous 58398279 3 145037507 145037508 C G 34 GENIC homozygous 58220316 3 145038528 145038529 C G 27 GENIC homozygous 58220318 3 145040040 145040041 A G 62 GENIC homozygous 57715143 3 145040367 145040368 T C 38 GENIC homozygous 57715144 3 145042444 145042445 T TA 6 GENIC heterozygous 57715154 3 145042444 145042445 T TAA 6 GENIC heterozygous 58653283 3 145046423 145046424 C G 17 INTERGENIC homozygous 57715156 3 145039317 145039318 A AGTGTGTGTGT 17 GENIC homozygous 58627100 3 145046158 145046159 C CTT 2 INTERGENIC homozygous 58627101 3 145046564 145046565 T - 2 INTERGENIC homozygous 58627102 3 145047763 145047764 C CT 14 INTERGENIC homozygous 58220334 3 145047989 145047990 G GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 1 INTERGENIC homozygous 58653284 3 145048039 145048040 G GT 7 INTERGENIC homozygous 58220336 3 145048083 145048084 G - 11 INTERGENIC homozygous 58220338 3 145048793 145048829 TAGAATGCTTGGGGCTAGCATGGCGTGGTGCCATAC ------------------------------------ 12 INTERGENIC homozygous 58627103 3 145049430 145049431 C T 5 INTERGENIC homozygous 58220342 3 145049535 145049536 C CAAAAAAAAAA 3 INTERGENIC homozygous 58627104 3 145049559 145049560 A - 16 INTERGENIC homozygous 58220348 3 145049431 145049432 C T 5 INTERGENIC homozygous 58220344 3 145049437 145049438 A T 6 INTERGENIC homozygous 58220346 3 145052224 145052225 A C 42 INTERGENIC homozygous 58220350 3 145052668 145052669 G - 23 INTERGENIC possibly homozygous 58220352 3 145053124 145053125 T C 33 INTERGENIC homozygous 57715166 3 145053363 145053364 A G 9 INTERGENIC homozygous 58220354 3 145053612 145053613 A G 21 INTERGENIC homozygous 58220356 3 145054321 145054322 C CACAG 24 INTERGENIC heterozygous 58627105 3 145054458 145054476 ACACACACACACACACAG ------------------ 31 GENIC heterozygous 58627106 3 145054460 145054476 ACACACACACACACAG ---------------- 28 GENIC heterozygous 58627107 3 145057866 145057867 T A 33 GENIC homozygous 57715177 3 145059682 145059688 GTGTGT ------ 14 GENIC heterozygous 58653285 3 145059684 145059688 GTGT ---- 14 GENIC heterozygous 58627109 3 145060364 145060366 TT -- 20 GENIC homozygous 58220368 3 145060895 145060899 ACCA ---- 13 GENIC homozygous 57715183 3 145060941 145060942 C A 7 GENIC homozygous 57715185 3 145062974 145062975 C T 63 GENIC homozygous 58220372 3 145066227 145066228 G A 29 GENIC homozygous 57715188 3 145066409 145066410 G T 47 GENIC homozygous 57715189 3 145066718 145066719 A AG 34 GENIC homozygous 58398280 3 145068255 145068257 AA -- 1 GENIC homozygous 58672734 3 145068640 145068641 C CG 48 GENIC homozygous 58398282 3 145069461 145069462 C CTGG 1 GENIC homozygous 58627110 3 145070004 145070005 G A 24 GENIC homozygous 58398283 3 145070264 145070265 A - 12 GENIC homozygous 58398284 3 145070313 145070315 AG -- 23 GENIC homozygous 58398285 3 145070413 145070418 TTTTT ----- 10 GENIC heterozygous 58627111 3 145070414 145070418 TTTT ---- 10 GENIC possibly homozygous 58627112 3 145070933 145070934 T C 14 GENIC homozygous 57715197 3 145071030 145071031 T TTGTGTGTGTG 10 GENIC homozygous 58627113 3 145071577 145071578 A C 10 GENIC homozygous 57715199 3 145085461 145085462 A - 7 GENIC heterozygous 57715200 3 145086942 145086943 T C 12 GENIC homozygous 57715202 3 145087278 145087279 C T 30 GENIC homozygous 57715204 3 145087301 145087302 G C 28 GENIC homozygous 57715205 3 145088739 145088740 C CGCTGTTCTGATTGATTGCTAGGCGGTGCATCAGGAGGCGCACAGGCCCGGCTTTG 47 GENIC possibly homozygous 58561786 3 145088886 145088887 G A 12 GENIC homozygous 58398286 3 145089117 145089118 G GTT 10 GENIC homozygous 58398287 3 145089185 145089186 A C 9 GENIC homozygous 58398288 3 145089400 145089401 T C 6 GENIC homozygous 57715212 3 145089410 145089411 T A 6 GENIC homozygous 58398289 3 145090221 145090222 G A 31 GENIC homozygous 57715214 3 145090531 145090539 GTGTGTGA -------- 19 GENIC heterozygous 58627114 3 145090557 145090583 GTGTGTGTGTGTGTGTGAGTGTGTGT -------------------------- 23 GENIC heterozygous 58561787 3 145090669 145090670 G A 30 GENIC homozygous 58398291 3 145091630 145091631 T TAA 18 GENIC homozygous 58398292 3 145091761 145091762 T C 36 GENIC homozygous 57715218 3 145093247 145093249 GG -- 9 GENIC possibly homozygous 57715221 3 145093425 145093426 A AGT 6 GENIC homozygous 58627115 3 145094130 145094131 A G 20 GENIC homozygous 57715222 3 145094515 145094516 T C 47 GENIC homozygous 57715223 3 145094823 145094824 T C 42 GENIC possibly homozygous 57715225 3 145094850 145094851 T A 30 GENIC homozygous 57715226 3 145095279 145095280 C G 24 GENIC homozygous 57715228 3 145095735 145095736 A G 5 GENIC homozygous 57715229 3 145096651 145096652 A G 24 GENIC homozygous 58398294 3 145096662 145096663 T C 26 GENIC homozygous 57715231 3 145096917 145096918 T C 41 GENIC homozygous 57715232 3 145096979 145096980 G GTC 21 GENIC possibly homozygous 58398295 3 145097021 145097026 TTTGG ----- 14 GENIC homozygous 57715233 3 145097754 145097755 G A 40 GENIC homozygous 57715234 3 145097981 145097983 TG -- 23 GENIC homozygous 58561788 3 145098746 145098747 G A 53 GENIC homozygous 57715235 3 145099091 145099092 G A 21 GENIC homozygous 57715236 3 145099231 145099232 G A 13 GENIC homozygous 58398296 3 145099386 145099387 G GT 10 GENIC homozygous 57715238 3 145099804 145099805 G GT 12 GENIC homozygous 58398297 3 145099822 145099837 TGGTGAGGCATCCCA --------------- 15 GENIC homozygous 57715239 3 145100298 145100299 T G 34 GENIC homozygous 58398298 3 145100636 145100637 C CCTT 48 GENIC homozygous 57715240 3 145100945 145100946 T C 28 GENIC homozygous 57715241 3 145101830 145101831 A G 40 GENIC homozygous 57715243 3 145103075 145103076 T TACACACACACAC 15 GENIC heterozygous 58627116 3 145103075 145103076 T TACACACACACACAC 15 GENIC heterozygous 58627117 3 145103075 145103076 T TACACACACACACACACACAC 15 GENIC heterozygous 58627118 3 145103274 145103275 G A 33 GENIC homozygous 57715244 3 145103335 145103336 G A 25 GENIC homozygous 57715245 3 145103400 145103401 G - 30 GENIC homozygous 57715246 3 145103473 145103474 C CA 42 GENIC homozygous 57715247 3 145104237 145104238 C T 60 GENIC homozygous 57715248 3 145104278 145104279 A T 51 GENIC homozygous 57715249 3 145104566 145104567 A G 43 GENIC homozygous 57715250 3 145106889 145106891 CT -- 3 GENIC heterozygous 58434604 3 145107830 145107831 A G 21 GENIC homozygous 57715251 3 145107860 145107861 T - 13 GENIC homozygous 58398299 3 145109180 145109181 T TCACA 2 GENIC homozygous 58627120 3 145110784 145110785 G A 14 GENIC homozygous 58398300 3 145111319 145111320 T - 14 GENIC homozygous 57715254 3 145111555 145111556 C A 10 GENIC homozygous 58398301 3 145113664 145113665 A T 24 GENIC homozygous 57715257 3 145114509 145114510 G C 46 INTERGENIC homozygous 58398302 3 145115139 145115140 A - 39 GENIC homozygous 57715258 3 145115840 145115841 C T 34 GENIC homozygous 57715259 3 145116292 145116293 C T 20 GENIC homozygous 58398303 3 145116337 145116338 T C 24 GENIC homozygous 57715260 3 145116531 145116533 GG -- 7 GENIC homozygous 58627121 3 145116627 145116628 A G 12 GENIC homozygous 58398304 3 145120345 145120346 A AT 6 GENIC homozygous 57715265 3 145121107 145121108 T G 7 GENIC homozygous 57715266 3 145121169 145121170 T C 3 GENIC homozygous 57715267 3 145122811 145122812 T G 30 GENIC homozygous 57715270 3 145124304 145124305 A G 39 GENIC homozygous 57715271 3 145125064 145125065 T C 12 GENIC homozygous 57715272 3 145125734 145125735 G A 23 GENIC homozygous 58398309 3 145116885 145116894 TTTTCTTTT --------- 1 GENIC homozygous 58398305 3 145120562 145120564 AC -- 13 GENIC homozygous 58398307 3 145122975 145122976 C CTT 13 GENIC homozygous 58398308 3 145126484 145126485 T C 33 GENIC homozygous 58398310 3 145126580 145126581 T G 34 GENIC homozygous 57715275 3 145127825 145127826 A C 24 GENIC homozygous 58398311 3 145128009 145128010 T C 18 GENIC homozygous 57715277 3 145128262 145128263 T A 17 GENIC homozygous 57715278 3 145129275 145129276 A T 9 GENIC homozygous 58398312 3 145129481 145129482 A G 36 GENIC homozygous 57715279 3 145129493 145129494 C T 35 GENIC homozygous 57715280 3 145129622 145129623 G A 39 GENIC homozygous 58398313 3 145130080 145130081 C - 13 GENIC heterozygous 57715282 3 145130880 145130881 C A 2 GENIC homozygous 58398314 3 145131492 145131493 C CTTTTTTTTTTTT 1 INTERGENIC homozygous 58653288 3 145131996 145131997 C T 22 GENIC homozygous 58398315 3 145132712 145132713 T A 30 GENIC homozygous 57715294 3 145133149 145133150 A G 21 GENIC homozygous 57715295 3 145134774 145134775 A G 24 GENIC homozygous 58398316 3 145135113 145135116 CCT --- 22 GENIC homozygous 58627122 3 145135118 145135206 TCAGTGAACCTTTGTGGAGCTTCCATTCTACTAATAGGGACACAGAAGAAATCAACATGTGTCGGATGATAATACAACCAACCCCCTT ---------------------------------------------------------------------------------------- 25 GENIC homozygous 58561789 3 145136311 145136313 AC -- 12 GENIC homozygous 57715297 3 145136590 145136591 C CTGTGTGTGTGTGTGTGTGTGTGTGTG 10 GENIC homozygous 58627123 3 145137323 145137324 T C 17 GENIC homozygous 57715298 3 145137350 145137351 T TTTTTG 10 GENIC homozygous 57715300 3 145137691 145137692 C T 31 GENIC homozygous 58398317 3 145137806 145137807 T C 30 GENIC homozygous 57715301 3 145138149 145138150 T C 41 GENIC homozygous 57715303 3 145138435 145138436 C T 18 INTERGENIC homozygous 57715304 3 145138818 145138819 C T 8 INTERGENIC homozygous 57715305 3 145138883 145138886 AAA --- 5 INTERGENIC heterozygous 58398318 3 145140018 145140019 G GTTTTTTT 1 INTERGENIC homozygous 57715315 3 145140122 145140123 G A 21 INTERGENIC homozygous 57715317 3 145141603 145141604 G A 15 INTERGENIC homozygous 57715319 3 145142205 145142206 T C 27 GENIC homozygous 57715320 3 145144603 145144604 A G 34 GENIC homozygous 57715323 3 145144842 145144843 T C 47 GENIC homozygous 58220444 3 145145158 145145159 T C 41 GENIC homozygous 58398321 3 145146017 145146018 T C 30 GENIC homozygous 58398322 3 145148201 145148203 TT -- 7 GENIC heterozygous 58653289 3 145148202 145148203 T - 7 GENIC heterozygous 57715342 3 145149017 145149018 G GCCTCC 31 GENIC homozygous 57715343 3 145149170 145149171 A - 8 GENIC heterozygous 57715344 3 145149260 145149261 G GT 6 GENIC heterozygous 57715345 3 145149285 145149286 T TTGTGTGTG 1 GENIC homozygous 58627125 3 145149536 145149537 C T 26 GENIC homozygous 57715346 3 145150240 145150241 A AACTGCTAAGACTGAACCCACAGTGAACTAGTCTATGGGGGGAGGGCGGC 3 GENIC homozygous 58627126 3 145150536 145150537 A ATATT 15 GENIC homozygous 57715347 3 145151884 145151885 A AGC 7 GENIC heterozygous 58627127 3 145151885 145151886 G GCGCGCGCGCACA 7 GENIC heterozygous 58627128 3 145152226 145152227 T C 11 GENIC homozygous 57715350 3 145152300 145152304 TATA ---- 3 GENIC homozygous 58220468 3 145152332 145152334 TC -- 8 GENIC homozygous 58220470 3 145152594 145152595 C CT 2 GENIC homozygous 57715352 3 145152623 145152624 A G 6 GENIC homozygous 57715353 3 145153838 145153839 C CT 3 GENIC heterozygous 58653290 3 145153838 145153839 C CTTT 3 GENIC heterozygous 58627129 3 145154352 145154353 A AGT 57 GENIC possibly homozygous 57715356 3 145154352 145154353 A AGTGTGTGTGTGTGT 57 GENIC heterozygous 59049490 3 145155842 145155843 T C 23 GENIC homozygous 57715357 3 145159242 145159243 A G 30 GENIC homozygous 58398324 3 145159257 145159258 G A 33 GENIC homozygous 58398325 3 145159448 145159449 C T 48 GENIC homozygous 58398326 3 145159781 145159782 C CTGTGTGTG 41 GENIC homozygous 58561790 3 145159795 145159796 A G 46 GENIC homozygous 58398327 3 145159817 145159818 A G 37 GENIC homozygous 58398328 3 145159855 145159856 G A 28 GENIC homozygous 58220480 3 145161157 145161158 G GA 8 GENIC homozygous 58220486 3 145161797 145161798 T C 20 GENIC homozygous 58220488 3 145163658 145163659 C T 34 GENIC homozygous 58220490 3 145163857 145163858 T G 46 GENIC homozygous 58220494 3 145163880 145163881 G GC 26 GENIC possibly homozygous 58220496 3 145163880 145163881 G GCC 26 GENIC heterozygous 58535092 3 145164349 145164350 A G 42 GENIC homozygous 58398329 3 145164504 145164506 TC -- 39 GENIC homozygous 57715361 3 145164907 145164908 T A 15 GENIC homozygous 57715362 3 145167157 145167158 T C 19 GENIC homozygous 57715365 3 145167440 145167441 G GTCCCTC 16 GENIC homozygous 57715366 3 145167485 145167486 C G 28 GENIC homozygous 58398330 3 145167809 145167810 C G 22 GENIC homozygous 57715369 3 145168041 145168042 T C 47 GENIC homozygous 57715371 3 145168649 145168650 G A 55 GENIC homozygous 58398331 3 145168650 145168651 T C 54 GENIC homozygous 58398332 3 145168925 145168926 C CTT 2 GENIC homozygous 58039169 3 145168993 145168994 G A 19 GENIC homozygous 58398333 3 145169149 145169150 A G 21 GENIC homozygous 58398334 3 145169643 145169644 C CTT 26 GENIC homozygous 58398336 3 145169711 145169715 TATT ---- 18 GENIC homozygous 58398337 3 145170196 145170197 C T 38 GENIC homozygous 58398338 3 145170310 145170311 C T 35 GENIC homozygous 58398339 3 145170444 145170445 C T 22 GENIC homozygous 58398340 3 145171046 145171047 A T 50 GENIC homozygous 58398341 3 145171263 145171264 G GAT 32 GENIC homozygous 58398342 3 145171457 145171458 T G 36 GENIC homozygous 57715378 3 145171528 145171529 T C 21 GENIC homozygous 58398343 3 145173389 145173390 C A 21 GENIC homozygous 58398346 3 145173498 145173499 G GATTC 42 GENIC homozygous 57715386 3 145173544 145173545 C CATGTGTGTGTGTGT 31 GENIC possibly homozygous 58561791 3 145174018 145174019 A G 46 GENIC homozygous 57715388 3 145174111 145174112 C T 42 GENIC homozygous 58398348 3 145174639 145174640 A G 25 GENIC homozygous 58398349 3 145175237 145175238 A G 24 GENIC homozygous 57715396 3 145175935 145175936 A C 39 GENIC homozygous 57715397 3 145176226 145176227 T A 28 GENIC homozygous 57715398 3 145176345 145176346 G T 12 GENIC homozygous 58398350 3 145176350 145176351 A AC 3 GENIC homozygous 58398351 3 145178713 145178714 T TCAGCGTCATGGATGTACCCACTTGCCTGTGTGTGTCCAGCGTCATGGATGTACTCACTTGACTGTGTGTGTC 25 GENIC possibly homozygous 58561793 3 145179027 145179029 CT -- 148 GENIC heterozygous 58434613 3 145180793 145180794 C T 28 GENIC homozygous 58398375 3 145180909 145180910 C G 2 GENIC homozygous 57715501 3 145180910 145180911 C G 2 GENIC homozygous 58398376 3 145180914 145180915 T C 2 GENIC homozygous 58398377 3 145180922 145180923 T C 3 GENIC heterozygous 58398378 3 145181272 145181273 A G 25 GENIC homozygous 58398381 3 145181417 145181418 C A 13 GENIC homozygous 57715503 3 145181969 145181970 T A 23 GENIC homozygous 57715505 3 145182025 145182026 G T 45 GENIC homozygous 57715506 3 145182095 145182096 G A 35 GENIC homozygous 58398382 3 145182104 145182105 C T 32 GENIC homozygous 58398383 3 145182230 145182231 A G 39 GENIC homozygous 58398384 3 145182232 145182233 T C 42 GENIC homozygous 57715507 3 145183124 145183125 C A 28 GENIC homozygous 58398385 3 145183238 145183239 G A 7 GENIC homozygous 57715508 3 145183866 145183867 G A 17 GENIC homozygous 58398386 3 145184002 145184003 C CA 7 GENIC homozygous 58039181 3 145184108 145184109 A C 21 GENIC homozygous 58398387 3 145193289 145193290 A T 24 INTERGENIC homozygous 58398392 3 145186639 145186640 C A 15 GENIC homozygous 57715518 3 145186720 145186721 A C 13 GENIC homozygous 58398389 3 145186917 145186918 A T 20 INTERGENIC homozygous 58398390 3 145187352 145187353 T C 9 INTERGENIC homozygous 57715521 3 145193288 145193289 T A 23 INTERGENIC homozygous 58561794 3 145194067 145194068 A G 16 INTERGENIC homozygous 57715522 3 145194670 145194671 C T 9 INTERGENIC homozygous 58398393 3 145194325 145194326 C CAAAAA 2 INTERGENIC heterozygous 58627132 3 145194332 145194333 A - 2 INTERGENIC heterozygous 59049492 3 145194364 145194365 C A 6 INTERGENIC homozygous 57715524 3 145194367 145194368 C - 6 INTERGENIC homozygous 57715526 3 145194719 145194726 AAAAAAA ------- 9 INTERGENIC heterozygous 58627133 3 145194736 145194737 A T 18 INTERGENIC homozygous 58561795 3 145196194 145196195 G A 8 GENIC homozygous 58398394 3 145196730 145196731 T - 36 INTERGENIC homozygous 57715532 3 145198431 145198432 T TC 54 INTERGENIC homozygous 57715536 3 145198433 145198434 A G 43 INTERGENIC homozygous 58561796 3 145198441 145198442 A C 43 INTERGENIC homozygous 57715538 3 145198447 145198448 G GA 40 INTERGENIC homozygous 57715539 3 145198452 145198453 A AC 39 INTERGENIC homozygous 57715540 3 145198454 145198455 C CA 36 INTERGENIC homozygous 57715541 3 145198464 145198465 A AG 37 INTERGENIC homozygous 57715542 3 145198519 145198520 G A 21 INTERGENIC homozygous 57715543 3 145198805 145198806 G GT 7 INTERGENIC heterozygous 58696997 3 145198806 145198807 T - 7 INTERGENIC heterozygous 57715545