chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 54250751 54250752 C T 15 GENIC homozygous 58452061 3 54250867 54250868 A - 8 GENIC homozygous 58452063 3 54251070 54251071 C T 25 GENIC homozygous 58452065 3 54251088 54251089 C G 26 GENIC homozygous 58452067 3 54251339 54251340 A AACACACACACACACAC 9 GENIC heterozygous 58804177 3 54251567 54251568 T C 13 GENIC homozygous 58452068 3 54251772 54251773 T C 23 GENIC homozygous 58452070 3 54251934 54251935 T C 21 GENIC homozygous 58452072 3 54252037 54252038 C T 21 GENIC homozygous 58452074 3 54252045 54252046 G A 20 GENIC homozygous 58452076 3 54252276 54252277 A G 13 GENIC homozygous 58452078 3 54252379 54252384 TCGGG ----- 16 GENIC homozygous 58452080 3 54252509 54252524 AAAAAAAAAAAAAAA --------------- 10 GENIC homozygous 58452082 3 54252776 54252777 A T 24 GENIC homozygous 58452084 3 54253167 54253170 TGT --- 17 GENIC homozygous 58452086 3 54253280 54253281 A G 18 GENIC homozygous 58452088 3 54253338 54253339 G A 16 GENIC homozygous 58452090 3 54253721 54253722 A T 12 GENIC homozygous 58452092 3 54253772 54253780 CCATCAAC -------- 15 GENIC homozygous 58452094 3 54253893 54253894 T TA 15 GENIC homozygous 58452096 3 54254013 54254014 A T 18 GENIC homozygous 58452098 3 54254384 54254385 C - 12 GENIC homozygous 58452100 3 54254464 54254465 T A 23 GENIC homozygous 58452102 3 54254937 54254938 T C 12 GENIC homozygous 58452104 3 54255063 54255064 G A 20 GENIC homozygous 58452106 3 54255248 54255249 G - 32 GENIC homozygous 58452108 3 54255250 54255251 G - 34 GENIC homozygous 58452110 3 54255269 54255270 T C 32 GENIC homozygous 58452112 3 54255274 54255286 GTGTGTGTGTGT ------------ 30 GENIC homozygous 58804179 3 54255289 54255290 T C 42 GENIC homozygous 58804181 3 54255293 54255294 T C 38 GENIC homozygous 58452118 3 54255294 54255295 G A 38 GENIC homozygous 58804183 3 54255298 54255300 GC -- 37 GENIC homozygous 58452120 3 54255583 54255584 C T 27 GENIC homozygous 58452122 3 54256132 54256133 C T 9 GENIC homozygous 58452124 3 54256151 54256154 GTC --- 9 GENIC homozygous 58452126 3 54256210 54256214 AGTT ---- 9 GENIC homozygous 58452128 3 54256782 54256783 C A 8 GENIC homozygous 58452129 3 54256827 54256828 T C 10 GENIC homozygous 58452131 3 54257187 54257188 T - 11 GENIC homozygous 58452133 3 54257250 54257251 A G 8 GENIC homozygous 58452135 3 54257509 54257510 A C 5 GENIC homozygous 58452137 3 54257514 54257515 C A 5 GENIC homozygous 57376841 3 54257613 54257614 C A 7 GENIC homozygous 57376843 3 54257694 54257695 C A 4 GENIC homozygous 57376844 3 54257715 54257716 A ATTTGATTTTT 5 GENIC homozygous 58452139 3 54257780 54257781 T C 6 GENIC homozygous 58452141 3 54258790 54258791 T C 8 GENIC homozygous 58452143 3 54259046 54259047 A AC 2 GENIC homozygous 58452145 3 54259062 54259063 A T 4 GENIC homozygous 58452147 3 54259147 54259148 G A 3 GENIC homozygous 58452149 3 54260781 54260782 T - 10 GENIC homozygous 58420508 3 54261798 54261813 TATGTCTTTGGAAAA --------------- 7 GENIC homozygous 58452151 3 54262037 54262038 G A 9 GENIC homozygous 58452153 3 54262135 54262136 C A 11 GENIC homozygous 58452154 3 54262619 54262620 C G 17 GENIC homozygous 58452156 3 54264201 54264202 T C 5 GENIC homozygous 58583041 3 54264202 54264203 C A 5 GENIC homozygous 58583042 3 54264212 54264213 G A 5 GENIC homozygous 57376845 3 54264220 54264221 T C 5 GENIC homozygous 58583043 3 54264225 54264226 G A 5 GENIC homozygous 57376846 3 54264240 54264241 G - 3 GENIC homozygous 57376848 3 54266559 54266560 T TGTGC 2 GENIC heterozygous 58745214 3 54266865 54266866 C T 17 GENIC homozygous 58452160 3 54267305 54267306 T C 14 GENIC homozygous 58452162 3 54268567 54268568 C CGTGTGTGTGTGTGT 1 GENIC homozygous 58804185 3 54270492 54270493 G GAA 2 GENIC homozygous 59964303 3 54261986 54261987 G GC 7 GENIC homozygous 58357247 3 54272058 54272064 ACACAC ------ 6 GENIC heterozygous 58583044 3 54272316 54272317 T TGGGATATAG 23 GENIC homozygous 58452168 3 54273176 54273177 C T 19 GENIC homozygous 58452170 3 54273288 54273289 A T 17 GENIC homozygous 58452172 3 54274222 54274223 C T 9 GENIC homozygous 58452174 3 54274367 54274368 A C 19 GENIC homozygous 58452175 3 54275536 54275537 C A 19 GENIC homozygous 58452177 3 54276687 54276688 C T 11 GENIC homozygous 58452179 3 54278511 54278513 TT -- 7 GENIC homozygous 58452180 3 54280021 54280022 T G 13 GENIC homozygous 58452182 3 54280027 54280028 A G 12 GENIC homozygous 58452184 3 54280383 54280384 T C 15 GENIC homozygous 58452186 3 54281388 54281389 G C 19 GENIC homozygous 58452187 3 54282058 54282059 A G 16 GENIC heterozygous 59683034 3 54282083 54282084 A - 5 GENIC homozygous 59964305 3 54282094 54282095 C CAAAAAAA 9 GENIC heterozygous 59964307 3 54282094 54282095 C CAAAAAA 9 GENIC heterozygous 59683036 3 54282426 54282427 C CT 18 GENIC possibly homozygous 58452189 3 54282441 54282442 A G 21 GENIC homozygous 57376856 3 54283484 54283485 T G 19 GENIC homozygous 58452191 3 54284582 54284584 GG -- 17 GENIC homozygous 58452193 3 54285904 54285905 G - 9 GENIC homozygous 57376857 3 54286043 54286044 A T 6 GENIC homozygous 58452195 3 54286876 54286877 C - 10 GENIC homozygous 58452197 3 54286890 54286891 T C 17 GENIC possibly homozygous 58452199 3 54287042 54287043 C G 5 GENIC heterozygous 58452200 3 54287054 54287055 A ACT 7 GENIC possibly homozygous 58357255 3 54287724 54287725 G A 14 GENIC homozygous 58452204 3 54287886 54287887 C T 24 GENIC homozygous 58452206 3 54287926 54287927 C T 16 GENIC homozygous 58452208 3 54288187 54288188 G A 18 GENIC homozygous 58452209 3 54289287 54289288 A T 11 GENIC homozygous 58452211 3 54289699 54289700 C T 7 GENIC homozygous 58452213 3 54290200 54290201 T A 23 GENIC homozygous 58452215 3 54291941 54291942 C CT 2 GENIC heterozygous 58745234 3 54293845 54293846 T A 12 GENIC homozygous 58452217 3 54293855 54293856 A AT 13 GENIC homozygous 58452219 3 54294174 54294175 A G 16 GENIC homozygous 58452220 3 54294415 54294416 T C 15 GENIC homozygous 58452222 3 54294452 54294453 T C 14 GENIC homozygous 58452224 3 54295623 54295624 A G 7 GENIC homozygous 58291038 3 54295681 54295682 C CAAAAAAAAAAAAA 3 GENIC homozygous 58649021 3 54295833 54295834 A G 7 GENIC homozygous 58357257 3 54296340 54296341 T TA 25 GENIC heterozygous 58900227 3 54296395 54296396 C - 41 GENIC heterozygous 58900229 3 54296411 54296412 G - 36 GENIC heterozygous 58900231 3 54297602 54297603 G GA 2 GENIC homozygous 57376862 3 54298172 54298173 G C 13 GENIC homozygous 58452228 3 54298302 54298303 C CATAAAGTATCTTGAG 5 GENIC homozygous 57376863 3 54298960 54298961 G GT 10 GENIC homozygous 58452230 3 54299008 54299009 G GCACGCACACACA 2 GENIC homozygous 58649022 3 54299315 54299316 T C 8 GENIC homozygous 58452232 3 54300308 54300309 T A 9 GENIC homozygous 58452234 3 54300635 54300636 C G 10 GENIC homozygous 58452235 3 54304395 54304398 GGT --- 15 GENIC homozygous 58452241 3 54301601 54301602 C T 15 GENIC homozygous 58452237 3 54302851 54302853 GT -- 3 GENIC heterozygous 58649023 3 54303650 54303651 T C 23 GENIC homozygous 58452239 3 54305243 54305244 T C 36 GENIC homozygous 58452243 3 54305383 54305384 G A 25 GENIC homozygous 58452245 3 54305724 54305725 A G 13 GENIC homozygous 58452247 3 54307153 54307154 A AT 13 GENIC homozygous 58452251 3 54307203 54307204 C A 14 GENIC homozygous 58452252 3 54307444 54307445 G A 23 GENIC homozygous 58452254 3 54307840 54307841 A AT 6 GENIC homozygous 58452256 3 54308002 54308003 C T 8 GENIC homozygous 58452258 3 54308926 54308927 T C 9 GENIC homozygous 58452260 3 54309110 54309111 T TTA 10 GENIC homozygous 57376867 3 54309445 54309446 T A 13 GENIC homozygous 58452262 3 54309468 54309471 GAC --- 9 GENIC homozygous 57376868 3 54309527 54309528 G C 11 GENIC homozygous 58452263 3 54309723 54309724 A - 8 GENIC homozygous 58452265 3 54310976 54310977 A AAC 6 GENIC homozygous 58583048 3 54311473 54311476 TCT --- 20 GENIC homozygous 58452267 3 54311928 54311929 G C 27 GENIC homozygous 58452269 3 54312299 54312300 G C 18 GENIC homozygous 58452270 3 54313190 54313191 C T 11 GENIC homozygous 58452272 3 54313400 54313401 G C 14 GENIC homozygous 58452274 3 54313664 54313665 T C 16 GENIC homozygous 58452276 3 54314134 54314135 A C 14 GENIC homozygous 58452278 3 54314265 54314266 G T 27 GENIC homozygous 58452280 3 54315445 54315446 T C 13 GENIC homozygous 58452282 3 54315551 54315552 T G 13 GENIC homozygous 59964310 3 54315552 54315553 G T 13 GENIC homozygous 59964312 3 54317664 54317683 GATGCTCAGTGGATTGAAA ------------------- 5 GENIC homozygous 59964315 3 54318437 54318438 A C 13 GENIC homozygous 58452283 3 54318720 54318721 C T 8 GENIC homozygous 58452285 3 54318796 54318797 T TTCGTTCCTTCCC 12 GENIC homozygous 59964317 3 54318816 54318817 T TTCCC 9 GENIC homozygous 59964319 3 54318969 54318973 CCTC ---- 3 GENIC homozygous 59964321 3 54319082 54319083 G A 12 GENIC homozygous 58452289 3 54319282 54319283 A - 14 GENIC homozygous 58452291 3 54319390 54319391 C A 15 GENIC homozygous 58452293 3 54319614 54319615 G A 15 GENIC homozygous 58452295 3 54319854 54319855 A G 8 GENIC homozygous 58452297 3 54320376 54320377 T C 5 GENIC homozygous 58452299 3 54320781 54320782 T - 8 GENIC homozygous 58452301 3 54321143 54321144 T C 5 GENIC homozygous 58452303 3 54321274 54321275 T C 6 GENIC homozygous 58452305 3 54321500 54321501 G A 8 GENIC homozygous 58452306 3 54321613 54321614 A ATATAC 5 GENIC homozygous 59964323 3 54321687 54321688 G C 10 GENIC homozygous 58452308 3 54322500 54322501 C T 4 GENIC homozygous 58452310 3 54322926 54322927 C T 6 GENIC homozygous 58452312 3 54322964 54322965 A G 9 GENIC homozygous 58452314 3 54323510 54323511 A C 3 GENIC homozygous 59683071 3 54323518 54323519 C T 5 GENIC homozygous 58452316 3 54323601 54323602 T - 14 GENIC homozygous 58452317 3 54324021 54324022 A - 6 GENIC homozygous 58685501 3 54324594 54324595 C T 17 GENIC homozygous 58452321 3 54325878 54325879 A G 9 GENIC homozygous 58452329 3 54325007 54325008 A G 13 GENIC homozygous 58452323 3 54325160 54325161 A G 12 GENIC homozygous 58452325 3 54325740 54325741 C T 8 GENIC homozygous 58452327 3 54325896 54325897 C G 10 GENIC homozygous 58452330 3 54326052 54326068 TCCAGGTTGACCTGGC ---------------- 3 GENIC homozygous 59964326 3 54326580 54326581 T C 12 GENIC homozygous 58452332 3 54326733 54326734 G T 3 GENIC homozygous 58452334 3 54326913 54326914 G T 3 GENIC homozygous 57376875 3 54326916 54326917 A G 3 GENIC homozygous 57376876 3 54326918 54326919 C A 3 GENIC homozygous 57376877 3 54326920 54326921 T - 3 GENIC homozygous 57376878 3 54326944 54326945 C A 1 GENIC homozygous 57376880 3 54328971 54328972 A G 15 GENIC homozygous 58452338 3 54329131 54329132 C - 11 GENIC homozygous 58452340 3 54329138 54329139 G A 12 GENIC homozygous 58452342 3 54329143 54329144 C G 13 GENIC homozygous 58452344 3 54329433 54329434 G A 16 GENIC homozygous 58452345 3 54329554 54329555 G GAAC 17 GENIC homozygous 58452347 3 54330365 54330366 C G 10 GENIC homozygous 58452349 3 54330992 54330993 T C 22 GENIC homozygous 58452351 3 54331598 54331599 A AG 11 GENIC homozygous 58452353 3 54333685 54333686 G A 23 GENIC possibly homozygous 58452355 3 54333983 54333984 T TTGTGTGTGTG 9 GENIC homozygous 59964328 3 54334710 54334711 C T 21 GENIC homozygous 58452357 3 54337698 54337699 C T 17 GENIC homozygous 58452358 3 54340677 54340678 C A 13 GENIC possibly homozygous 58452360 3 54341238 54341239 G GGT 8 GENIC homozygous 58452362 3 54341996 54341998 AT -- 21 GENIC homozygous 58452364 3 54342594 54342595 T C 14 GENIC homozygous 58452366 3 54342927 54342929 TA -- 7 GENIC homozygous 58452368