chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 52584071 52584072 T C 6 INTERGENIC homozygous 58354047 3 52588646 52588647 T C 10 INTERGENIC homozygous 58354049 3 52588846 52588847 G GCATA 11 INTERGENIC homozygous 58354051 3 52589592 52589593 A G 5 INTERGENIC homozygous 58354053 3 52590034 52590035 T TG 10 INTERGENIC homozygous 58354055 3 52591314 52591315 T A 12 INTERGENIC homozygous 58354057 3 52591495 52591496 A G 10 INTERGENIC homozygous 58354059 3 52592277 52592278 T C 11 INTERGENIC homozygous 58354061 3 52592658 52592659 T C 9 INTERGENIC homozygous 58354063 3 52593090 52593091 G GAGATAGAT 11 INTERGENIC homozygous 59419900 3 52593373 52593374 A T 14 INTERGENIC homozygous 58354069 3 52594242 52594243 T TA 9 INTERGENIC homozygous 58354071 3 52594613 52594614 T - 12 INTERGENIC homozygous 58354073 3 52595564 52595565 T A 10 INTERGENIC homozygous 58354075 3 52595605 52595606 A G 15 INTERGENIC homozygous 58354077 3 52595618 52595619 C A 11 INTERGENIC homozygous 58354079 3 52595908 52595909 A C 13 INTERGENIC homozygous 58354081 3 52596415 52596416 T C 21 INTERGENIC homozygous 58354083 3 52596568 52596569 A G 10 INTERGENIC homozygous 58354085 3 52605881 52605882 A G 6 INTERGENIC homozygous 58354089 3 52606470 52606471 A - 4 INTERGENIC heterozygous 59419902 3 52606774 52606775 A - 4 INTERGENIC heterozygous 58648977 3 52608287 52608288 C CAAT 12 INTERGENIC homozygous 58354091 3 52608361 52608362 C T 15 INTERGENIC homozygous 58354093 3 52608505 52608506 G T 13 INTERGENIC homozygous 58354095 3 52608851 52608852 T G 16 INTERGENIC homozygous 58354097 3 52610438 52610439 A T 12 INTERGENIC homozygous 58354099 3 52610991 52610992 T - 8 INTERGENIC homozygous 58354101 3 52612921 52612922 C CG 6 INTERGENIC homozygous 58354103 3 52614771 52614772 C A 14 INTERGENIC homozygous 58354105 3 52614825 52614826 G A 8 INTERGENIC homozygous 58354107 3 52615688 52615689 T C 11 GENIC homozygous 58354109 3 52615788 52615789 C T 4 GENIC homozygous 58354111 3 52615969 52615979 TGCTACTTCC ---------- 8 INTERGENIC homozygous 58354113 3 52616187 52616188 T C 9 INTERGENIC homozygous 58354115 3 52616664 52616665 G A 6 INTERGENIC homozygous 58354117 3 52616668 52616669 T - 6 INTERGENIC homozygous 58354119 3 52616821 52616822 G A 8 INTERGENIC homozygous 58354121 3 52617376 52617377 G GGAGA 13 INTERGENIC homozygous 58354123 3 52617646 52617647 T C 11 INTERGENIC homozygous 58354125 3 52618103 52618104 T - 9 INTERGENIC homozygous 58354127 3 52618795 52618796 C T 11 INTERGENIC homozygous 58354129 3 52620161 52620162 T - 4 INTERGENIC homozygous 58354131 3 52620740 52620741 T A 10 INTERGENIC homozygous 57376037 3 52620741 52620742 T G 10 INTERGENIC homozygous 57376038 3 52620746 52620747 C T 11 INTERGENIC homozygous 57376039 3 52621235 52621236 G C 3 INTERGENIC homozygous 58354133 3 52621317 52621318 G A 5 INTERGENIC homozygous 58354135 3 52628191 52628192 G GA 2 INTERGENIC homozygous 58354137 3 52628571 52628572 A G 10 INTERGENIC homozygous 58354139 3 52628870 52628871 G - 1 INTERGENIC homozygous 58354141 3 52629247 52629248 C T 3 INTERGENIC homozygous 58354143 3 52632469 52632470 G T 2 INTERGENIC homozygous 58354147 3 52632717 52632718 T - 12 INTERGENIC homozygous 58354149 3 52632985 52632986 A G 14 INTERGENIC homozygous 58354151 3 52633127 52633128 A AGTGTGT 5 INTERGENIC homozygous 59419904 3 52634352 52634353 C CA 10 INTERGENIC heterozygous 57888328 3 52634658 52634659 A - 7 INTERGENIC homozygous 57376044 3 52635718 52635719 A AACACACAC 1 INTERGENIC homozygous 58684885 3 52635742 52635743 T C 2 INTERGENIC homozygous 58684886 3 52638413 52638414 C CT 5 INTERGENIC heterozygous 58684887 3 52641151 52641152 G GT 8 INTERGENIC homozygous 58354157 3 52634370 52634371 A - 6 INTERGENIC homozygous 58354153 3 52635905 52635906 G A 5 INTERGENIC homozygous 58354155 3 52641789 52641790 C T 5 INTERGENIC homozygous 58354159 3 52641843 52641844 C CACACACACA 6 INTERGENIC heterozygous 59419908 3 52642195 52642196 C T 7 INTERGENIC homozygous 58354161 3 52643816 52643820 AAAT ---- 1 INTERGENIC homozygous 58354163 3 52644854 52644855 T A 7 INTERGENIC homozygous 58354165 3 52645253 52645254 C CAGAGAGAGAGAGAG 3 INTERGENIC heterozygous 58684900 3 52645275 52645276 C CAG 2 INTERGENIC homozygous 58354167 3 52645329 52645331 AT -- 5 INTERGENIC heterozygous 58684902 3 52645350 52645351 C CTGTGTGTGTG 4 INTERGENIC homozygous 59419910 3 52646596 52646598 CC -- 2 INTERGENIC homozygous 58544612 3 52649340 52649341 T TA 3 INTERGENIC homozygous 58354170 3 52649346 52649347 C A 3 INTERGENIC homozygous 58544613 3 52649356 52649357 G GA 2 INTERGENIC homozygous 57376047 3 52649614 52649615 C CA 3 INTERGENIC homozygous 58354172 3 52649624 52649625 G GT 5 INTERGENIC homozygous 57376048 3 52650663 52650664 T TAA 4 INTERGENIC homozygous 58354176 3 52650868 52650872 GTTT ---- 3 INTERGENIC homozygous 58354178 3 52651365 52651366 A G 19 INTERGENIC homozygous 58354180 3 52652179 52652180 T TGAGATTG 6 INTERGENIC homozygous 58354182 3 52652782 52652904 GTTTCTTATTTTTTTTTTTTTGGTTCTTTTTTTTTTTTTTTTTTTTCCGGAGCTGGGGACCGTACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCC -------------------------------------------------------------------------------------------------------------------------- 8 INTERGENIC homozygous 58544614 3 52653653 52653654 T C 16 INTERGENIC homozygous 58354184 3 52654872 52654873 T C 5 INTERGENIC homozygous 58354186 3 52655754 52655762 CGCTGGCT -------- 1 GENIC homozygous 58684911 3 52657076 52657077 A G 1 GENIC homozygous 58354188 3 52657843 52657844 A - 7 GENIC homozygous 58354190 3 52657891 52657892 C T 10 GENIC homozygous 58354192 3 52657931 52657932 C T 6 GENIC homozygous 58354194 3 52658043 52658044 T C 7 GENIC homozygous 58354196 3 52658183 52658184 T C 3 GENIC homozygous 58354200 3 52658998 52658999 C G 12 GENIC homozygous 58354202 3 52659507 52659508 G A 13 GENIC homozygous 58354204 3 52660645 52660646 C CA 13 GENIC homozygous 58354206 3 52660902 52660903 T TAATA 6 GENIC homozygous 58354208 3 52661121 52661125 ATAC ---- 3 GENIC homozygous 58354210 3 52661555 52661556 A AT 13 GENIC homozygous 58354212 3 52661748 52661749 C T 11 GENIC homozygous 58354214 3 52661760 52661761 G A 11 GENIC homozygous 58354216 3 52661977 52661978 C T 9 GENIC homozygous 58354218