chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 54359687 54359688 C T 5 INTERGENIC homozygous 59606576 3 54361195 54361196 C - 31 INTERGENIC homozygous 58745275 3 54362288 54362289 A AT 31 INTERGENIC homozygous 58452422 3 54363518 54363519 A C 29 INTERGENIC homozygous 58452424 3 54365521 54365522 C T 18 INTERGENIC homozygous 58452428 3 54366026 54366027 A T 24 INTERGENIC homozygous 58452430 3 54367460 54367461 A AGTGT 7 INTERGENIC homozygous 58452434 3 54368119 54368120 T TAC 16 INTERGENIC homozygous 58452436 3 54368681 54368682 T - 9 INTERGENIC heterozygous 58583053 3 54368714 54368716 TG -- 16 INTERGENIC possibly homozygous 59606578 3 54368719 54368720 T G 15 INTERGENIC possibly homozygous 59606580 3 54368735 54368736 G GT 5 INTERGENIC heterozygous 58649026 3 54368736 54368737 T - 5 INTERGENIC heterozygous 57376893 3 54366150 54366151 T - 15 INTERGENIC possibly homozygous 57376892 3 54372839 54372847 ATGACATT -------- 5 INTERGENIC heterozygous 59606582 3 54374051 54374052 G A 28 INTERGENIC homozygous 58452448 3 54376155 54376156 T - 14 INTERGENIC homozygous 58452454 3 54376228 54376229 C G 31 INTERGENIC homozygous 58745277 3 54376534 54376535 G GACAGACCCATGGCTCCAGCTGCATAT 8 INTERGENIC heterozygous 58583054 3 54376536 54376537 T TAGCAGAGGATGGCCCTGTCGGGCATCAATAGGAGG 8 INTERGENIC heterozygous 58583055 3 54377064 54377076 GCCTTGAACCAT ------------ 25 INTERGENIC homozygous 58745279 3 54377481 54377482 A - 19 INTERGENIC homozygous 58452458 3 54378775 54378776 T TCC 4 INTERGENIC homozygous 58745281 3 54379160 54379161 G A 20 INTERGENIC homozygous 59606584 3 54380896 54380897 T - 14 INTERGENIC possibly homozygous 58452468 3 54381711 54381712 G T 24 INTERGENIC homozygous 58745283 3 54382183 54382184 C T 28 INTERGENIC homozygous 58745285 3 54382851 54382852 A T 28 INTERGENIC homozygous 58452479 3 54384956 54384957 T C 35 INTERGENIC homozygous 58452487 3 54403734 54403735 C T 10 INTERGENIC homozygous 59606586 3 54403737 54403738 T C 10 INTERGENIC homozygous 59606588 3 54404379 54404380 G T 5 INTERGENIC homozygous 59606590 3 54404385 54404391 TGTGTG ------ 6 INTERGENIC homozygous 59606592 3 54404612 54404613 C A 18 INTERGENIC homozygous 58452505 3 54404916 54404917 C A 21 INTERGENIC homozygous 58745287 3 54411977 54411978 C A 17 INTERGENIC homozygous 58745289 3 54412232 54412233 A G 27 INTERGENIC homozygous 58452512 3 54412474 54412475 A G 22 INTERGENIC homozygous 58452520 3 54413099 54413100 A C 24 INTERGENIC homozygous 58452527 3 54415945 54415948 CTT --- 18 INTERGENIC homozygous 58745291 3 54419835 54419836 A T 29 INTERGENIC homozygous 58452551 3 54420738 54420739 C T 22 INTERGENIC homozygous 58452553 3 54420744 54420745 C T 19 INTERGENIC homozygous 58745293 3 54432954 54432955 G A 5 INTERGENIC heterozygous 59606594 3 54433142 54433143 T G 6 INTERGENIC homozygous 58452562 3 54433143 54433144 T A 5 INTERGENIC homozygous 58452564 3 54433396 54433397 C T 19 INTERGENIC possibly homozygous 59606596 3 54434123 54434124 T A 22 INTERGENIC homozygous 58452572 3 54434405 54434406 C T 18 INTERGENIC possibly homozygous 58745297 3 54434573 54434574 G T 19 INTERGENIC homozygous 58745301 3 54434622 54434623 T C 23 INTERGENIC homozygous 58745303 3 54435225 54435226 T G 36 INTERGENIC homozygous 58452579 3 54435663 54435664 A G 19 INTERGENIC homozygous 58745305 3 54435832 54435833 A C 21 INTERGENIC homozygous 58745307 3 54436040 54436041 A G 27 INTERGENIC homozygous 58745309 3 54436102 54436103 G GA 22 INTERGENIC homozygous 57376895 3 54436979 54436980 G GT 22 INTERGENIC homozygous 57376896 3 54437079 54437080 A - 18 INTERGENIC homozygous 58745311 3 54441455 54441456 G A 4 INTERGENIC homozygous 57376897 3 54441460 54441461 G GA 4 INTERGENIC homozygous 57376898 3 54441461 54441462 C A 2 INTERGENIC homozygous 58583056 3 54441472 54441473 A AT 6 INTERGENIC homozygous 57376899 3 54442164 54442165 A AT 23 INTERGENIC homozygous 59606598 3 54442690 54442691 G GTT 13 INTERGENIC homozygous 58804204 3 54443097 54443098 T C 24 INTERGENIC homozygous 58745313 3 54443272 54443273 C T 23 INTERGENIC homozygous 58745315 3 54443835 54443836 C T 18 INTERGENIC homozygous 59606600 3 54444061 54444062 T C 27 INTERGENIC homozygous 58452603 3 54444062 54444063 T C 27 INTERGENIC homozygous 58452605 3 54444498 54444506 CTCTCTCT -------- 12 INTERGENIC heterozygous 59606602 3 54444500 54444506 CTCTCT ------ 12 INTERGENIC heterozygous 58900241 3 54444533 54444535 TC -- 22 INTERGENIC homozygous 58853518 3 54444600 54444601 C CTA 25 INTERGENIC possibly homozygous 59198495 3 54444985 54444986 A G 23 INTERGENIC homozygous 58452609 3 54448390 54448391 G T 17 INTERGENIC possibly homozygous 59606604 3 54448724 54448725 A G 2 INTERGENIC homozygous 58357279 3 54457025 54457028 TTT --- 16 INTERGENIC heterozygous 58804206 3 54457026 54457028 TT -- 16 INTERGENIC possibly homozygous 58804208 3 54457027 54457028 T - 16 INTERGENIC heterozygous 58804210 3 54457082 54457083 T C 25 INTERGENIC homozygous 58452627 3 54457222 54457223 T C 22 INTERGENIC homozygous 58745317 3 54457606 54457607 G A 19 INTERGENIC homozygous 58745319 3 54457680 54457681 T C 19 INTERGENIC homozygous 58452629 3 54458866 54458867 A T 25 INTERGENIC homozygous 57376903 3 54460466 54460467 C CA 28 INTERGENIC homozygous 57376904 3 54460704 54460705 A G 22 INTERGENIC homozygous 59606606 3 54460757 54460758 G T 32 INTERGENIC homozygous 58745321 3 54461329 54461330 A T 23 INTERGENIC homozygous 59606608 3 54461687 54461688 G C 25 INTERGENIC homozygous 58357283 3 54461987 54461988 A C 28 INTERGENIC homozygous 58452646 3 54463062 54463063 G A 31 INTERGENIC homozygous 58745323 3 54463478 54463479 C CA 18 INTERGENIC homozygous 58452650 3 54464466 54464467 T TG 4 INTERGENIC homozygous 59606610 3 54464653 54464654 C T 24 INTERGENIC homozygous 58745325 3 54467295 54467296 A - 1 INTERGENIC homozygous 58745327 3 54467317 54467318 A G 17 INTERGENIC possibly homozygous 58745329 3 54467570 54467571 A T 23 INTERGENIC homozygous 58452658 3 54469058 54469059 C CA 17 INTERGENIC homozygous 57376905 3 54471403 54471404 A AG 10 INTERGENIC homozygous 57376906 3 54471413 54471417 GGGA ---- 5 INTERGENIC homozygous 57376907 3 54474700 54474701 T C 22 INTERGENIC homozygous 58452660 3 54474774 54474775 G A 37 INTERGENIC homozygous 58452662 3 54475061 54475062 A G 21 INTERGENIC homozygous 58357287 3 54475921 54475922 G A 16 INTERGENIC homozygous 58452664 3 54478482 54478483 A G 23 GENIC homozygous 58452672 3 54478615 54478616 T C 15 GENIC homozygous 58452673 3 54479020 54479021 T C 24 INTERGENIC homozygous 58452675 3 54479350 54479351 G - 27 INTERGENIC homozygous 57376910 3 54479869 54479870 G GT 8 INTERGENIC homozygous 57376911 3 54480015 54480016 A G 16 INTERGENIC homozygous 58452679 3 54480980 54480981 T - 21 INTERGENIC homozygous 58452683 3 54486572 54486573 T C 23 INTERGENIC homozygous 58452687 3 54486608 54486609 G T 28 INTERGENIC homozygous 58452689 3 54487040 54487041 G T 25 INTERGENIC homozygous 58452691 3 54487374 54487375 G GT 16 INTERGENIC homozygous 59041695 3 54487430 54487431 C T 7 INTERGENIC homozygous 58452692 3 54487448 54487449 G - 1 INTERGENIC homozygous 57376917 3 54488150 54488151 T C 18 INTERGENIC homozygous 58452694 3 54488484 54488485 G A 31 INTERGENIC homozygous 58452696 3 54488834 54488835 T C 27 INTERGENIC homozygous 58452698 3 54489245 54489246 T - 23 INTERGENIC homozygous 58452700 3 54489446 54489447 G A 21 INTERGENIC homozygous 58452702 3 54489493 54489494 C G 20 INTERGENIC homozygous 58452704 3 54489541 54489542 C G 22 INTERGENIC homozygous 58452706 3 54489684 54489685 T C 34 INTERGENIC homozygous 58452708 3 54490256 54490257 C T 21 INTERGENIC homozygous 58745331 3 54490614 54490615 T G 21 INTERGENIC homozygous 58452712 3 54491022 54491023 G T 16 INTERGENIC homozygous 58452714 3 54491493 54491494 T C 16 INTERGENIC possibly homozygous 58452716 3 54491845 54491846 A G 14 INTERGENIC homozygous 58452718 3 54492139 54492140 T C 23 INTERGENIC homozygous 58452720 3 54492972 54492973 G A 38 INTERGENIC homozygous 58452722 3 54492997 54492998 A ATATCCCCTCCTATGAATATTTTTGTTCCTTCTTTTAAGAAGAACTGAAG 15 INTERGENIC homozygous 58804216 3 54493390 54493391 A T 19 INTERGENIC homozygous 58452726 3 54493403 54493404 C CT 14 INTERGENIC homozygous 58452728 3 54493504 54493505 A G 24 INTERGENIC homozygous 58452730 3 54493517 54493518 T C 23 INTERGENIC homozygous 58452732 3 54493780 54493781 A T 16 INTERGENIC homozygous 58452734 3 54493907 54493908 A T 20 INTERGENIC homozygous 58420509 3 54494237 54494238 C CATTTCTGGGTCTTCAATTCTATT 8 INTERGENIC homozygous 57376918 3 54494264 54494265 C T 22 INTERGENIC homozygous 58452736 3 54494266 54494267 T C 23 INTERGENIC homozygous 58452738 3 54495171 54495172 T C 25 INTERGENIC homozygous 58452740 3 54495447 54495448 T A 23 INTERGENIC homozygous 58357289 3 54495459 54495460 T C 21 INTERGENIC homozygous 58452742 3 54495851 54495852 T - 15 INTERGENIC homozygous 58452744 3 54496153 54496154 T C 21 INTERGENIC homozygous 58452746 3 54499825 54499826 G GGT 22 INTERGENIC homozygous 58452748 3 54500693 54500696 TTT --- 4 INTERGENIC heterozygous 58649027 3 54500695 54500696 T - 4 INTERGENIC heterozygous 58649028 3 54503115 54503116 C T 33 INTERGENIC homozygous 58452756 3 54507955 54507956 T TTCTCTC 4 INTERGENIC homozygous 58583060 3 54508444 54508445 A G 10 INTERGENIC homozygous 57376924 3 54508589 54508592 AAG --- 25 INTERGENIC homozygous 58745335 3 54527352 54527353 A G 29 INTERGENIC homozygous 58452772 3 54527397 54527398 C - 18 INTERGENIC possibly homozygous 58452774 3 54527487 54527488 A G 13 INTERGENIC homozygous 58452776 3 54528553 54528554 C T 23 INTERGENIC homozygous 58452778 3 54528722 54528723 C A 23 INTERGENIC homozygous 58452780 3 54528987 54528988 C G 20 INTERGENIC homozygous 58452782 3 54529829 54529830 C A 24 INTERGENIC homozygous 58452790 3 54530016 54530018 AT -- 17 INTERGENIC homozygous 58452792 3 54530087 54530088 C T 17 INTERGENIC homozygous 58745339 3 54530104 54530112 ACACACAC -------- 5 INTERGENIC homozygous 59606612 3 54530309 54530313 ACAC ---- 1 INTERGENIC homozygous 58685504 3 54530372 54530381 ATAGATAAG --------- 11 INTERGENIC homozygous 58745341 3 54531105 54531106 C T 39 INTERGENIC homozygous 58452794 3 54531231 54531235 ATTT ---- 31 INTERGENIC homozygous 58745343 3 54531386 54531387 A AAT 13 INTERGENIC possibly homozygous 59606614 3 54531434 54531436 TA -- 26 INTERGENIC homozygous 58452796 3 54532832 54532833 G A 22 INTERGENIC homozygous 58452800 3 54533371 54533372 T A 14 INTERGENIC homozygous 58452802 3 54537945 54537946 C T 27 INTERGENIC possibly homozygous 58452804 3 54538059 54538063 AAAA ---- 11 INTERGENIC heterozygous 59606616 3 54538060 54538063 AAA --- 11 INTERGENIC heterozygous 58804226 3 54538062 54538063 A - 11 INTERGENIC heterozygous 58583062 3 54538265 54538266 C T 15 INTERGENIC heterozygous 59606618 3 54538752 54538753 A C 5 INTERGENIC homozygous 58452812 3 54538872 54538873 C T 2 INTERGENIC homozygous 59606620 3 54555155 54555156 A ATC 28 INTERGENIC homozygous 58745345 3 54555160 54555162 GA -- 32 INTERGENIC homozygous 58745347 3 54555215 54555223 TGTGTGTA -------- 2 INTERGENIC heterozygous 58804228 3 54555618 54555622 GTGT ---- 1 INTERGENIC homozygous 58685505 3 54556211 54556212 T C 16 INTERGENIC homozygous 58452814 3 54556422 54556423 C T 23 INTERGENIC homozygous 58452816 3 54556440 54556441 A G 18 INTERGENIC homozygous 58745349 3 54556511 54556512 T - 10 INTERGENIC homozygous 58452818 3 54556614 54556615 G A 22 INTERGENIC homozygous 58452820 3 54556630 54556631 A AT 12 INTERGENIC homozygous 59606622 3 54556681 54556682 C T 19 INTERGENIC possibly homozygous 58452822 3 54556854 54556855 A C 32 INTERGENIC homozygous 58452824 3 54562480 54562481 G T 29 INTERGENIC homozygous 58452844 3 54557055 54557056 A AT 14 INTERGENIC homozygous 58452826 3 54557212 54557213 A G 5 INTERGENIC homozygous 57376930 3 54561375 54561376 G A 7 INTERGENIC heterozygous 59606624 3 54562318 54562319 G T 29 INTERGENIC homozygous 58452842 3 54562794 54562795 G GTT 11 INTERGENIC heterozygous 58452846 3 54562794 54562795 G GTTTT 11 INTERGENIC possibly homozygous 59606626 3 54562976 54562977 T - 19 INTERGENIC homozygous 58506012 3 54563187 54563188 G GTTTTAATTTAATTTAATTTATTTTTTCTTATTTGTTCTTTTTTACTTTGCAGTGTTTAATATTCCTTCTCCCCACCCCTGTATACTTGGT 4 INTERGENIC homozygous 59606628 3 54563645 54563646 A G 19 INTERGENIC homozygous 58452848 3 54563710 54563711 C T 33 INTERGENIC homozygous 58452850 3 54564029 54564030 T A 22 INTERGENIC homozygous 58452852 3 54565316 54565317 G C 17 INTERGENIC homozygous 58745351 3 54565791 54565792 G - 20 INTERGENIC homozygous 58452854 3 54566282 54566283 G T 25 INTERGENIC homozygous 58452858 3 54567193 54567194 G C 23 INTERGENIC homozygous 58745353 3 54568339 54568340 G T 21 INTERGENIC homozygous 58745355 3 54568552 54568553 T C 21 INTERGENIC homozygous 58506018 3 54568795 54568796 C - 22 INTERGENIC homozygous 57376939 3 54568860 54568861 G A 31 INTERGENIC homozygous 58506020 3 54569092 54569093 C CT 15 INTERGENIC heterozygous 58357291 3 54569093 54569098 TTTTT ----- 15 INTERGENIC heterozygous 59606630 3 54569094 54569098 TTTT ---- 15 INTERGENIC possibly homozygous 58804232 3 54569681 54569682 T C 12 INTERGENIC possibly homozygous 58506023 3 54569685 54569686 A G 10 INTERGENIC possibly homozygous 58452866 3 54569830 54569831 T C 21 INTERGENIC homozygous 58506025 3 54569913 54569914 C G 20 INTERGENIC possibly homozygous 58452868 3 54571133 54571134 G C 6 INTERGENIC homozygous 58506033 3 54571226 54571227 G T 10 INTERGENIC homozygous 58745357 3 54571438 54571439 T G 11 INTERGENIC homozygous 58452872 3 54576460 54576461 A C 13 INTERGENIC homozygous 58745365 3 54576209 54576210 T A 21 INTERGENIC homozygous 58745359 3 54576323 54576324 C T 17 INTERGENIC homozygous 58745361 3 54576459 54576460 A - 13 INTERGENIC possibly homozygous 58745363 3 54576553 54576554 A AT 20 INTERGENIC homozygous 58506045 3 54576823 54576824 C T 27 INTERGENIC homozygous 58452874 3 54576959 54576960 C G 25 INTERGENIC homozygous 58506050 3 54577509 54577510 G T 29 INTERGENIC homozygous 58506052 3 54578392 54578393 T G 26 INTERGENIC homozygous 58506056 3 54578401 54578406 TGGCC ----- 29 INTERGENIC homozygous 58745367 3 54578628 54578629 G A 24 INTERGENIC homozygous 58506060 3 54578819 54578820 A C 27 INTERGENIC homozygous 58506062 3 54578954 54578955 A C 32 INTERGENIC homozygous 58745369 3 54580794 54580795 T G 32 INTERGENIC homozygous 58745371 3 54580821 54580822 A G 22 INTERGENIC homozygous 58506066 3 54581277 54581278 T - 16 INTERGENIC homozygous 58506068 3 54581465 54581467 AT -- 25 INTERGENIC homozygous 58506070 3 54581831 54581832 G A 23 INTERGENIC homozygous 58745373 3 54582165 54582166 C CAT 7 INTERGENIC homozygous 58357295 3 54582211 54582212 T TGA 6 INTERGENIC homozygous 58804238 3 54583368 54583369 T G 23 INTERGENIC homozygous 58745376 3 54583644 54583645 A G 25 INTERGENIC possibly homozygous 58745378 3 54584512 54584513 A C 19 INTERGENIC homozygous 58357297 3 54584736 54584737 G A 27 INTERGENIC homozygous 58745380 3 54585010 54585011 A G 29 INTERGENIC homozygous 58745382 3 54585074 54585075 C T 32 INTERGENIC homozygous 58452882 3 54585188 54585189 G - 14 INTERGENIC homozygous 58745384 3 54586174 54586178 TAAA ---- 16 INTERGENIC homozygous 58745386 3 54586667 54586668 T C 29 INTERGENIC homozygous 58357301 3 54586964 54586965 A G 20 INTERGENIC homozygous 58357303 3 54586967 54586968 T - 15 INTERGENIC homozygous 58544703 3 54587359 54587360 T C 22 INTERGENIC homozygous 58357309 3 54587797 54587798 G C 36 INTERGENIC homozygous 58745388 3 54588353 54588361 CACATACA -------- 11 INTERGENIC homozygous 59606632 3 54588680 54588681 A - 21 INTERGENIC homozygous 58357321 3 54590131 54590132 G - 16 INTERGENIC homozygous 58745390 3 54591330 54591331 G GAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCACACATACTGGAGAGAGCTGAACAGTTAGAGGCATTTGCCATCAAGTCTGATTACTGGACC 3 INTERGENIC homozygous 58583066 3 54591584 54591585 T - 10 INTERGENIC homozygous 58452892 3 54591666 54591667 C T 25 INTERGENIC homozygous 58745392 3 54592343 54592344 T A 19 INTERGENIC homozygous 58745394 3 54596220 54596221 A C 16 INTERGENIC homozygous 58357337 3 54596733 54596734 C CTTTT 8 INTERGENIC heterozygous 57376942 3 54597007 54597008 A AT 13 INTERGENIC homozygous 58357343 3 54597022 54597023 T - 7 INTERGENIC homozygous 59606634 3 54597040 54597041 T G 4 INTERGENIC homozygous 57376950 3 54599228 54599229 C CTT 8 INTERGENIC heterozygous 58853526 3 54606233 54606234 A G 22 INTERGENIC homozygous 58357365 3 54606477 54606478 G A 29 INTERGENIC homozygous 58357367 3 54606694 54606695 G A 37 INTERGENIC homozygous 58452909 3 54606918 54606919 G A 13 INTERGENIC homozygous 58745396 3 54606954 54606955 A G 22 INTERGENIC homozygous 58357371 3 54607283 54607284 T - 22 INTERGENIC homozygous 58357373 3 54607351 54607352 T - 18 INTERGENIC homozygous 58357375 3 54607397 54607398 A - 19 INTERGENIC homozygous 58745398 3 54607489 54607490 A G 16 INTERGENIC homozygous 58452917 3 54607771 54607772 A ACTTAGTTT 24 INTERGENIC homozygous 57376964 3 54607799 54607800 T A 33 INTERGENIC homozygous 58745400 3 54607800 54607801 A G 33 INTERGENIC homozygous 58745402 3 54608052 54608053 A G 29 INTERGENIC homozygous 58357377 3 54608286 54608287 G A 24 INTERGENIC homozygous 58357379 3 54608588 54608589 T C 27 INTERGENIC homozygous 58357381 3 54615403 54615404 T A 14 INTERGENIC homozygous 58357385 3 54616211 54616212 C G 21 INTERGENIC homozygous 58357387 3 54616691 54616692 G T 6 INTERGENIC homozygous 58506084 3 54616694 54616703 GAAAGCCTC --------- 8 INTERGENIC homozygous 58506086 3 54618292 54618293 T C 19 INTERGENIC homozygous 58357395 3 54618393 54618394 C T 17 INTERGENIC homozygous 58745404 3 54618786 54618787 C T 39 INTERGENIC homozygous 58745406 3 54621729 54621730 G A 23 INTERGENIC possibly homozygous 58357409 3 54621935 54621936 G C 29 INTERGENIC homozygous 58745408 3 54622193 54622194 C T 36 INTERGENIC homozygous 58745410 3 54622334 54622335 A T 24 INTERGENIC homozygous 58745412 3 54622805 54622806 C T 31 INTERGENIC homozygous 58745414 3 54623120 54623121 C T 39 INTERGENIC homozygous 58506100 3 54623508 54623509 A G 29 INTERGENIC homozygous 58745416 3 54624040 54624041 T C 27 INTERGENIC homozygous 58506102 3 54624089 54624090 T - 26 INTERGENIC homozygous 58745418 3 54624155 54624156 A ACAACAACAACAG 25 INTERGENIC homozygous 58745420 3 54624279 54624280 A G 29 INTERGENIC homozygous 58745422 3 54624792 54624793 G A 26 INTERGENIC homozygous 58506104 3 54624819 54624825 AACAAA ------ 8 INTERGENIC homozygous 58506106 3 54624939 54624940 A T 21 INTERGENIC homozygous 58745424