chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 54960824 54960825 C A 34 GENIC homozygous 58358208 3 54963926 54963927 A G 37 GENIC homozygous 58358210 3 54964564 54964565 C T 39 GENIC homozygous 58358212 3 54965674 54965675 G A 44 GENIC homozygous 58358214 3 54967530 54967531 C T 25 GENIC homozygous 58358216 3 54968075 54968076 G C 27 GENIC homozygous 58358218 3 54968667 54968668 A AT 21 GENIC homozygous 58358220 3 54968776 54968780 GAGA ---- 6 GENIC homozygous 58946291 3 54969880 54969881 C CT 26 GENIC possibly homozygous 58358222 3 54969994 54969995 C T 25 GENIC homozygous 58358224 3 54970064 54970065 A AAGAGAGAGAGAG 1 GENIC homozygous 58946293 3 54970260 54970264 TGTG ---- 15 GENIC heterozygous 58667488 3 54970262 54970264 TG -- 15 GENIC heterozygous 58667489 3 54970905 54970906 G A 22 GENIC homozygous 58358226 3 54971019 54971020 A G 27 GENIC homozygous 58358228 3 54972072 54972073 A G 29 GENIC homozygous 58358231 3 54972371 54972372 G T 35 GENIC homozygous 58358233 3 54973124 54973125 T A 25 GENIC homozygous 58358235 3 54973453 54973454 G A 28 GENIC homozygous 58358237 3 54973602 54973603 A G 39 GENIC homozygous 58358239 3 54974830 54974831 G A 31 GENIC homozygous 58358241 3 54974897 54974898 T C 26 GENIC homozygous 58358243 3 54975052 54975053 A G 31 GENIC homozygous 58358245 3 54975147 54975155 TGTGTGTG -------- 8 GENIC homozygous 58649046 3 54975315 54975316 G T 34 GENIC homozygous 57377066 3 54975325 54975326 A T 37 GENIC homozygous 57377067 3 54975744 54975749 TCAAC ----- 33 GENIC homozygous 57377068 3 54975754 54975755 C A 32 GENIC homozygous 57377069 3 54975760 54975761 C A 30 GENIC homozygous 57377070 3 54975767 54975768 C - 30 GENIC homozygous 57377071 3 54976195 54976196 T C 35 GENIC homozygous 58358247 3 54976793 54976794 T C 31 GENIC homozygous 58358249 3 54977545 54977546 T C 26 GENIC homozygous 58358253 3 54977619 54977620 A AGTAAAGGACCT 34 GENIC homozygous 58358255 3 54977716 54977717 A C 39 GENIC homozygous 58358257 3 54977724 54977725 A G 41 GENIC homozygous 58358259 3 54978050 54978051 A G 41 GENIC homozygous 58358261 3 54978955 54978956 A AGAGAGAGAG 28 GENIC heterozygous 58946295 3 54979082 54979083 C G 27 GENIC homozygous 58358263 3 54979325 54979326 G A 30 GENIC homozygous 58358265 3 54979366 54979367 T C 34 GENIC homozygous 58358267 3 54980233 54980234 C G 35 GENIC homozygous 58358269 3 54982044 54982045 T C 23 GENIC homozygous 58358271 3 54982111 54982115 GTGT ---- 9 GENIC heterozygous 58804371 3 54982161 54982162 A G 24 GENIC homozygous 58358273 3 54982474 54982475 C A 28 GENIC homozygous 58358275 3 54983631 54983632 T C 21 GENIC homozygous 58358277 3 54983775 54983776 C A 31 GENIC homozygous 58358279 3 54984156 54984157 T C 37 GENIC homozygous 58358281 3 54984722 54984723 G T 27 GENIC homozygous 58358283 3 54986422 54986423 T A 23 GENIC homozygous 58358285 3 54987231 54987232 G A 21 GENIC homozygous 58358287 3 54987363 54987364 A - 36 GENIC homozygous 58291072 3 54988164 54988165 G T 23 GENIC homozygous 58358291 3 54988641 54988642 A G 32 GENIC homozygous 58358293 3 54988998 54988999 T C 35 GENIC homozygous 58358295 3 54990019 54990020 T TA 34 GENIC possibly homozygous 57377073 3 54990181 54990182 G A 28 GENIC homozygous 58358297 3 54990647 54990648 A G 32 GENIC homozygous 58358299 3 54990808 54990809 A C 22 GENIC homozygous 58358301 3 54990820 54990821 C T 24 GENIC homozygous 58358303 3 54991318 54991320 AC -- 7 GENIC heterozygous 57377075 3 54991585 54991586 A G 18 GENIC homozygous 58358305 3 54992359 54992360 G - 50 GENIC homozygous 58358307 3 54993042 54993043 T G 16 GENIC homozygous 58358309 3 54993198 54993199 C CCCAAG 27 GENIC homozygous 57377076 3 54997223 54997224 T C 35 GENIC homozygous 58358311 3 54997949 54997950 C T 34 GENIC homozygous 58358313 3 54998330 54998331 A ACG 37 GENIC homozygous 58358315 3 54998827 54998828 G A 26 GENIC homozygous 58358317 3 54998897 54998898 T TA 20 GENIC homozygous 58358319 3 55001357 55001358 T C 25 GENIC homozygous 58358321 3 55001648 55001649 A AT 23 GENIC homozygous 58358323 3 55002169 55002171 GG -- 14 GENIC homozygous 57888447 3 55002566 55002567 A T 32 GENIC homozygous 58358325 3 55003374 55003375 T C 34 GENIC homozygous 58358327 3 55005448 55005456 TGTGTGTT -------- 7 GENIC heterozygous 58946297 3 55007046 55007047 C T 23 GENIC homozygous 58358329 3 55008152 55008153 G A 40 GENIC homozygous 58358331 3 55009267 55009268 T G 28 GENIC homozygous 58358333 3 55009799 55009800 G T 16 GENIC homozygous 58358335 3 55010253 55010254 A G 28 GENIC homozygous 58358337 3 55010840 55010841 G T 24 GENIC homozygous 58358339 3 55011410 55011411 C T 30 GENIC homozygous 58358341 3 55012022 55012025 ATG --- 25 GENIC homozygous 58358343 3 55014948 55014949 T - 27 GENIC homozygous 58358345 3 55015040 55015041 C A 21 GENIC homozygous 58358347 3 55015170 55015171 C G 18 GENIC homozygous 58358349 3 55015683 55015684 C T 30 GENIC homozygous 58358351 3 55015825 55015843 ACAGAGAGAGAGAGAGAG ------------------ 7 GENIC possibly homozygous 58946300 3 55016456 55016457 G A 41 GENIC homozygous 58358353 3 55016585 55016586 A G 36 GENIC homozygous 58358355 3 55017034 55017035 G GC 31 GENIC homozygous 58358357 3 55018539 55018540 T A 26 GENIC homozygous 58358359 3 55018848 55018849 G A 40 GENIC homozygous 58358361 3 55019570 55019572 CC -- 8 GENIC homozygous 58946302 3 55019698 55019716 TCTCTCTCTCTCTCTCTC ------------------ 13 GENIC heterozygous 58946304 3 55020113 55020114 A G 30 GENIC homozygous 58358374 3 55020116 55020117 A C 29 GENIC homozygous 58358376 3 55020779 55020780 A G 22 GENIC homozygous 58358378 3 55023073 55023074 A G 32 GENIC homozygous 58358380 3 55024097 55024098 C T 25 GENIC homozygous 58358382 3 55026873 55026879 CACACA ------ 29 GENIC homozygous 58946306 3 55027430 55027431 C T 33 GENIC homozygous 58358384 3 55028980 55028981 T A 18 GENIC homozygous 58358386 3 55029917 55029918 A G 35 GENIC homozygous 58358388 3 55031471 55031472 C T 34 GENIC homozygous 58358390 3 55032903 55032904 C CTGTGTGTG 13 GENIC homozygous 58804381 3 55034508 55034509 T C 23 GENIC homozygous 58358392 3 55036869 55036870 C CT 14 GENIC heterozygous 57888448