chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
3	176586039	176586040	C	T	15	INTERGENIC	homozygous	57811694
3	176586163	176586164	G	A	20	INTERGENIC	homozygous	57811696
3	176586193	176586194	A	G	17	INTERGENIC	homozygous	57811698
3	176586247	176586248	G	T	26	INTERGENIC	homozygous	57811700
3	176586281	176586282	G	T	19	INTERGENIC	homozygous	57811702
3	176586445	176586446	A	G	14	INTERGENIC	homozygous	57811704
3	176586593	176586599	ACACAA	------	23	INTERGENIC	heterozygous	57811706
3	176586593	176586594	A	G	23	INTERGENIC	heterozygous	58634083
3	176586595	176586599	ACAA	----	23	INTERGENIC	heterozygous	57811708
3	176586775	176586776	T	G	29	INTERGENIC	homozygous	57811710
3	176587128	176587129	C	T	24	INTERGENIC	homozygous	57811712
3	176587130	176587131	C	CA	24	INTERGENIC	homozygous	57811714
3	176587244	176587245	A	T	25	INTERGENIC	homozygous	57811716
3	176587255	176587256	A	T	20	INTERGENIC	homozygous	57811718
3	176587406	176587407	A	G	22	INTERGENIC	homozygous	57811720
3	176587470	176587471	T	C	35	INTERGENIC	homozygous	57811722
3	176587471	176587472	G	A	36	INTERGENIC	homozygous	57811724
3	176590013	176590014	A	G	20	INTERGENIC	homozygous	57811726
3	176590132	176590133	T	C	38	INTERGENIC	homozygous	57811728
3	176590210	176590214	CCCC	----	22	INTERGENIC	homozygous	57811730
3	176590283	176590284	T	A	14	INTERGENIC	homozygous	57811732
3	176590368	176590369	T	G	24	INTERGENIC	homozygous	57811734
3	176590647	176590648	A	G	32	INTERGENIC	homozygous	57811736
3	176590754	176590755	A	C	27	INTERGENIC	homozygous	57811738
3	176590769	176590824	TGTAGTCTGCCTGTAGTCTGCCTGTAGTCCTCCTGTAGTCCTTCTGTAGTCTACG	-------------------------------------------------------	31	INTERGENIC	homozygous	58565767
3	176590995	176590996	C	T	42	INTERGENIC	homozygous	57811752
3	176591371	176591372	A	G	38	INTERGENIC	homozygous	57811754
3	176591790	176591791	G	C	30	INTERGENIC	homozygous	57811756
3	176591791	176591792	T	C	30	INTERGENIC	homozygous	57811758
3	176591913	176591925	CACACACACACA	------------	7	INTERGENIC	homozygous	58634084
3	176591960	176591966	ACCAAC	------	15	INTERGENIC	homozygous	57811762
3	176592277	176592283	ACCAAC	------	9	INTERGENIC	homozygous	58674166
3	176592499	176592500	T	C	23	INTERGENIC	homozygous	57811764
3	176593024	176593025	T	A	29	INTERGENIC	homozygous	57811766
3	176593182	176593188	TGTGTG	------	37	INTERGENIC	homozygous	57811768
3	176593263	176593269	GTGTAA	------	26	INTERGENIC	homozygous	57811770
3	176593352	176593353	G	GT	35	INTERGENIC	homozygous	57811772
3	176593353	176593354	G	GT	36	INTERGENIC	homozygous	57811776
3	176593418	176593419	A	G	26	INTERGENIC	homozygous	57811778
3	176593494	176593495	T	C	15	INTERGENIC	homozygous	57811780
3	176593495	176593496	G	A	15	INTERGENIC	homozygous	57811782
3	176593694	176593695	T	TACACACACACAC	13	INTERGENIC	homozygous	58565768
3	176593744	176593745	C	G	25	INTERGENIC	homozygous	57811788
3	176593946	176593947	A	AAAAAAAAAAAAAAAAAAG	9	INTERGENIC	possibly homozygous	58634085
3	176593978	176593979	A	G	13	INTERGENIC	homozygous	57811792
3	176594002	176594003	G	A	13	INTERGENIC	homozygous	57811794
3	176594438	176594439	T	C	32	INTERGENIC	homozygous	57811796
3	176594460	176594461	A	ACCTTGGCACATGGATGCAAGG	35	INTERGENIC	homozygous	57811798
3	176594563	176594564	A	C	25	INTERGENIC	homozygous	57811800
3	176594634	176594635	G	A	28	INTERGENIC	homozygous	57811802
3	176594956	176594957	C	T	28	INTERGENIC	homozygous	57811804
3	176595001	176595006	TCTCT	-----	12	INTERGENIC	homozygous	58634086
3	176595048	176595058	TCTCTCTCTG	----------	14	INTERGENIC	homozygous	57811810
3	176595109	176595139	GTCTCTCTCTCTCCCTCTCCCTGTCTCTCT	------------------------------	12	INTERGENIC	possibly homozygous	58634088
3	176595169	176595170	C	G	21	INTERGENIC	homozygous	57811818
3	176595729	176595730	A	ATCC	27	INTERGENIC	homozygous	57811820
3	176595779	176595780	A	C	26	INTERGENIC	homozygous	57811822
3	176597057	176597058	A	G	23	INTERGENIC	homozygous	57811824
3	176597622	176597623	T	C	6	INTERGENIC	homozygous	57811826
3	176597929	176597930	G	GTAAATAAATAAATAAATAAA	6	INTERGENIC	homozygous	58634089
3	176598060	176598134	GGAAGGAAGGGAGGGAGAGAAGGAAGGAGGGAGAGAGGGAAGGAAGGGAGGGAGAGAAGGAAGGAGGGAGAGAC	--------------------------------------------------------------------------	16	INTERGENIC	heterozygous	58565770
3	176598353	176598354	G	A	22	INTERGENIC	homozygous	57811830
3	176598492	176598494	CA	--	19	INTERGENIC	homozygous	58253978
3	176598612	176598613	T	C	46	INTERGENIC	homozygous	57811832
3	176598716	176598717	A	G	27	INTERGENIC	homozygous	57811834
3	176598918	176598919	A	AATACAGTCCT	15	INTERGENIC	homozygous	57811836
3	176599001	176599004	CCT	---	29	INTERGENIC	homozygous	57811840
3	176599357	176599358	T	A	28	INTERGENIC	homozygous	57811842
3	176599622	176599636	TGTCTATGTGTAAA	--------------	35	INTERGENIC	homozygous	57811844
3	176599937	176599938	A	G	43	INTERGENIC	homozygous	57811852
3	176600057	176600058	T	G	25	INTERGENIC	homozygous	57811854
3	176601176	176601188	AAAACAAAAACA	------------	27	INTERGENIC	homozygous	58634090
3	176601477	176601478	T	TA	16	INTERGENIC	homozygous	57811858
3	176602450	176602451	G	A	15	INTERGENIC	homozygous	57811860
3	176602460	176602461	G	C	17	INTERGENIC	homozygous	57811862
3	176602663	176602675	GTTGTTGTCGTC	------------	11	INTERGENIC	homozygous	57811864
3	176603043	176603044	G	C	38	INTERGENIC	homozygous	58050308
3	176603574	176603575	G	T	32	INTERGENIC	homozygous	57811868
3	176603650	176603651	G	T	31	INTERGENIC	homozygous	57811870
3	176603963	176603964	A	AG	30	INTERGENIC	homozygous	57811872
3	176604350	176604369	CACGGCATGAATAGGTTTC	-------------------	11	INTERGENIC	homozygous	58565771
3	176604978	176604979	C	T	32	INTERGENIC	homozygous	57811874
3	176605216	176605217	T	C	17	INTERGENIC	homozygous	57811876
3	176605506	176605507	G	-	1	INTERGENIC	homozygous	57811884
3	176598827	176598828	A	AAGAG	11	INTERGENIC	homozygous	58661007
3	176605811	176605812	G	GGAGGAAGAGGAAGAGGAGGAGGAAGAAGAGGAGGAAGAAAAAGGAGAAGAAGGAGAAGGAGGAGGAGAAGGAGAAGGAGGAGAA	19	INTERGENIC	homozygous	58634091
3	176605838	176605839	A	G	24	INTERGENIC	homozygous	57811892
3	176606420	176606421	T	C	29	INTERGENIC	homozygous	57811904
3	176607771	176607772	A	G	27	INTERGENIC	homozygous	57811912
3	176608866	176608867	A	AG	31	INTERGENIC	homozygous	57811914
3	176609086	176609087	G	A	29	INTERGENIC	homozygous	57811916
3	176609855	176609873	CACACACACACACACACA	------------------	13	INTERGENIC	homozygous	58634093
3	176609928	176609929	A	G	23	INTERGENIC	homozygous	57811920
3	176610862	176610863	G	GCA	23	INTERGENIC	heterozygous	57811924
3	176611387	176611388	A	G	20	INTERGENIC	homozygous	57811926
3	176611436	176611437	G	A	24	INTERGENIC	homozygous	57811928
3	176611662	176611663	G	GA	15	INTERGENIC	heterozygous	57811930
3	176612974	176612975	C	T	38	INTERGENIC	homozygous	57811932
3	176613517	176613518	C	CTCTCTCTCTT	35	INTERGENIC	possibly homozygous	58634094
3	176613677	176613678	A	G	37	INTERGENIC	homozygous	57811936
3	176614156	176614157	G	GAC	28	INTERGENIC	homozygous	57811938
3	176614160	176614161	G	C	27	INTERGENIC	homozygous	58634095
3	176614180	176614181	G	C	27	INTERGENIC	homozygous	57811940
3	176614197	176614198	A	AAAGAAAGG	23	INTERGENIC	homozygous	58634096
3	176614207	176614208	A	AG	6	INTERGENIC	homozygous	58634097
3	176614209	176614210	A	AAGG	21	INTERGENIC	homozygous	58634098
3	176614417	176614418	G	A	39	INTERGENIC	homozygous	57811952
3	176614738	176614739	C	T	43	INTERGENIC	homozygous	57811954
3	176615197	176615198	A	G	27	INTERGENIC	homozygous	57811956
3	176615531	176615532	G	A	32	INTERGENIC	homozygous	57811958
3	176615596	176615597	T	C	34	INTERGENIC	homozygous	57811959
3	176615629	176615630	G	C	35	INTERGENIC	homozygous	57811961
3	176616173	176616174	T	G	37	INTERGENIC	homozygous	57811963
3	176616738	176616739	C	T	45	INTERGENIC	homozygous	57811965
3	176617131	176617132	C	T	37	INTERGENIC	homozygous	57811967
3	176617297	176617298	T	C	40	INTERGENIC	homozygous	57811969
3	176617387	176617388	C	T	41	INTERGENIC	homozygous	57811971
3	176617484	176617485	G	A	31	INTERGENIC	homozygous	57811973
3	176617620	176617621	A	C	39	INTERGENIC	homozygous	57811975
3	176617775	176617776	C	T	32	INTERGENIC	homozygous	57811977
3	176617776	176617777	A	G	33	INTERGENIC	homozygous	57811979
3	176617894	176618007	AGGGTCAAATTTTTTTTTTTTGTTGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCCCT	-----------------------------------------------------------------------------------------------------------------	18	INTERGENIC	homozygous	58634099
3	176618223	176618224	T	-	35	INTERGENIC	homozygous	57811985
3	176618335	176618336	G	A	30	INTERGENIC	homozygous	57811987
3	176618345	176618346	G	A	33	INTERGENIC	homozygous	57811989
3	176618399	176618400	G	A	28	INTERGENIC	homozygous	57811992
3	176618697	176618698	G	GGT	10	INTERGENIC	heterozygous	57811994
3	176618697	176618698	G	GGTGT	10	INTERGENIC	heterozygous	58634100
3	176618697	176618698	G	GGTGTGT	10	INTERGENIC	heterozygous	58634101
3	176618813	176618814	G	GTGAGAACCTA	22	INTERGENIC	homozygous	57811996
3	176618999	176619000	C	T	34	INTERGENIC	homozygous	57811998
3	176619251	176619252	A	G	25	INTERGENIC	homozygous	57812000
3	176619850	176619851	T	A	17	INTERGENIC	homozygous	57812002
3	176620407	176620423	TTGTTTGTTTGTTTGT	----------------	15	INTERGENIC	homozygous	57812004
3	176620637	176620638	C	T	21	INTERGENIC	homozygous	57812006
3	176623095	176623101	ACACAC	------	6	INTERGENIC	homozygous	57812014
3	176622631	176622632	C	T	27	INTERGENIC	homozygous	57812008
3	176622969	176622970	A	-	14	INTERGENIC	homozygous	57812010
3	176622976	176622977	T	C	16	INTERGENIC	homozygous	57812012
3	176624602	176624603	C	A	27	INTERGENIC	homozygous	57812016
3	176624856	176624857	T	G	8	INTERGENIC	homozygous	57812018
3	176626156	176626157	G	GAGAA	11	GENIC	homozygous	57812020
3	176626864	176626865	C	CGGCGTT	19	GENIC	homozygous	57812021
3	176628370	176628372	AA	--	24	GENIC	heterozygous	58661011
3	176628371	176628372	A	-	24	GENIC	heterozygous	58634102
3	176628713	176628714	A	G	27	GENIC	homozygous	57812027
3	176629137	176629138	T	TG	6	GENIC	homozygous	57812029
3	176629331	176629332	T	TTTGGAAAGGTCTCTCGTGCTCGCTTCGGCAGCACATATACTAAAA	28	GENIC	homozygous	58634103
3	176630100	176630101	T	C	24	GENIC	homozygous	57812031
3	176630121	176630122	T	C	24	GENIC	homozygous	57812033
3	176630412	176630414	AA	--	16	GENIC	possibly homozygous	57812035
3	176630413	176630414	A	-	16	GENIC	heterozygous	57812037
3	176631062	176631065	GAA	---	28	GENIC	homozygous	57812039
3	176631108	176631109	A	G	35	GENIC	homozygous	57812041
3	176631737	176631738	T	C	34	GENIC	homozygous	57812043
3	176632061	176632062	G	T	24	GENIC	homozygous	57812045
3	176633224	176633225	G	A	24	GENIC	homozygous	57812047
3	176633235	176633236	A	G	28	GENIC	homozygous	57812049
3	176633772	176633780	GAAATATT	--------	25	INTERGENIC	homozygous	57812051
3	176633816	176633817	A	AT	24	INTERGENIC	homozygous	57812053
3	176634385	176634386	A	ATT	18	INTERGENIC	possibly homozygous	57812055
3	176634385	176634386	A	ATTT	18	INTERGENIC	heterozygous	58634104
3	176634702	176634703	C	T	32	INTERGENIC	homozygous	57812057
3	176635605	176635606	G	A	33	INTERGENIC	homozygous	57812059
3	176635799	176635800	T	-	13	INTERGENIC	homozygous	57812061
3	176636119	176636120	T	TA	30	INTERGENIC	homozygous	57812063
3	176636260	176636261	T	TC	31	INTERGENIC	homozygous	57812065
3	176636267	176636268	T	TC	31	INTERGENIC	homozygous	57812067
3	176636276	176636277	C	-	28	INTERGENIC	homozygous	58634105
3	176636280	176636281	T	TC	28	INTERGENIC	homozygous	58634106
3	176636313	176636314	T	TTG	11	INTERGENIC	homozygous	58634107
3	176636351	176636352	T	G	10	INTERGENIC	heterozygous	57812073
3	176636365	176636366	C	CT	11	INTERGENIC	possibly homozygous	57812075
3	176636369	176636370	C	T	16	INTERGENIC	homozygous	57812077
3	176637195	176637196	A	T	22	INTERGENIC	homozygous	57812081
3	176638067	176638068	A	AGTGT	19	INTERGENIC	heterozygous	57812083
3	176638067	176638068	A	AGT	19	INTERGENIC	heterozygous	58254018
3	176638353	176638354	A	G	24	INTERGENIC	homozygous	57812085
3	176639433	176639435	GT	--	8	INTERGENIC	homozygous	58634108
3	176639436	176639486	TATGTGTGTGTATGTGTGTGAGTGTATGTGTGTGTATGTGTGTCTTTATG	--------------------------------------------------	15	INTERGENIC	homozygous	58634109
3	176639502	176639513	TGTGTATATAT	-----------	11	INTERGENIC	homozygous	58634110
3	176639625	176639727	TGTGTGTATATATGTGTGTATATATGTGTGTATGTGTATGTGTGTGAGTGTATGTGTGTGTATGTGTGTCTTTATGTGTATGTGTGTATGTGTGTGTATATA	------------------------------------------------------------------------------------------------------	11	INTERGENIC	homozygous	58634111
3	176639850	176639851	G	A	29	INTERGENIC	homozygous	57812113
3	176639874	176639875	A	-	29	INTERGENIC	homozygous	57812115
3	176639876	176639877	A	C	28	INTERGENIC	homozygous	57812117
3	176640358	176640359	A	G	27	INTERGENIC	homozygous	57812119
3	176640583	176640584	G	GGA	24	INTERGENIC	homozygous	57812121
3	176640616	176640624	AAGGAAGA	--------	25	INTERGENIC	homozygous	58634112
3	176641021	176641022	A	G	27	INTERGENIC	homozygous	57812131
3	176641077	176641078	G	GAAAA	23	INTERGENIC	homozygous	57812133
3	176641556	176641557	G	GAAGCGCA	16	INTERGENIC	homozygous	57812135
3	176641589	176641590	C	CG	11	INTERGENIC	homozygous	57812141
3	176641605	176641606	C	CAAAAAAAAAA	12	INTERGENIC	homozygous	58634113
3	176641729	176641730	A	T	29	INTERGENIC	homozygous	57812145
3	176641767	176641768	C	T	28	INTERGENIC	homozygous	57812147
3	176642036	176642037	A	-	18	INTERGENIC	homozygous	57812149
3	176642085	176642086	A	T	23	INTERGENIC	homozygous	57812151
3	176643623	176643624	T	C	32	INTERGENIC	homozygous	57812153
3	176644048	176644049	G	A	22	INTERGENIC	homozygous	57812155
3	176644073	176644074	T	C	10	INTERGENIC	homozygous	57812157
3	176644297	176644305	TCTCTCTC	--------	3	INTERGENIC	heterozygous	58634114
3	176644898	176644899	A	T	36	INTERGENIC	homozygous	57812159
3	176644990	176644993	TCC	---	23	INTERGENIC	homozygous	57812161