chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 129480942 129480943 T C 46 GENIC homozygous 57669682 3 129481386 129481387 T G 30 GENIC homozygous 57669684 3 129481755 129481761 AAAAAA ------ 5 GENIC heterozygous 58809118 3 129482220 129482221 T C 30 GENIC homozygous 57669686 3 129483106 129483107 C CTTATT 21 GENIC homozygous 57669688 3 129483361 129483362 C G 5 GENIC homozygous 57669690 3 129483406 129483408 TC -- 6 GENIC heterozygous 57669698 3 129483415 129483416 C G 6 GENIC heterozygous 58322569 3 129483664 129483668 CACA ---- 1 GENIC homozygous 57669702 3 129484045 129484046 A G 28 GENIC homozygous 57669706 3 129485156 129485157 T A 36 GENIC homozygous 57669710 3 129486170 129486171 G A 25 GENIC homozygous 57669712 3 129486851 129486852 G C 38 GENIC homozygous 57669714 3 129487894 129487896 TT -- 25 GENIC heterozygous 57669716 3 129487895 129487896 T - 25 GENIC heterozygous 57669718 3 129488857 129488859 TT -- 17 GENIC homozygous 57669720 3 129489273 129489274 C T 34 GENIC homozygous 57669724 3 129490649 129490650 T - 30 GENIC homozygous 57669726 3 129491126 129491127 G A 34 GENIC homozygous 57669728 3 129491228 129491312 GTGCATGTTTTATGTTTGCTTGTGTGTATATGTATGTGTGCCTGTGCATGTTTTATGTTTGCTTGTGTGTATATGTATGTGTGC ------------------------------------------------------------------------------------ 44 GENIC heterozygous 58695681 3 129483411 129483412 G A 5 GENIC heterozygous 58695678 3 129483421 129483422 G C 6 GENIC heterozygous 58695679 3 129483425 129483426 C G 3 GENIC heterozygous 58695680 3 129491885 129491886 T - 20 GENIC possibly homozygous 57669736 3 129491903 129491904 T - 28 GENIC homozygous 57669738 3 129491983 129491984 T C 29 GENIC homozygous 57669740 3 129492874 129492875 T A 29 GENIC homozygous 57669742 3 129493050 129493051 C T 28 GENIC homozygous 57669744 3 129493061 129493062 T G 30 GENIC homozygous 57669746 3 129493320 129493321 C T 37 GENIC homozygous 57669748 3 129493546 129493547 A G 29 GENIC homozygous 57669750 3 129494032 129494033 G C 41 GENIC homozygous 57669752 3 129494583 129494584 G A 33 GENIC homozygous 57669754 3 129495146 129495147 T C 23 GENIC homozygous 57669756 3 129495171 129495172 T - 4 GENIC homozygous 58695682 3 129495173 129495184 TCTCTCTCTCT ----------- 4 GENIC heterozygous 58695683 3 129495173 129495182 TCTCTCTCT --------- 4 GENIC heterozygous 58695684 3 129495578 129495579 A G 35 GENIC homozygous 57669762 3 129495742 129495744 GT -- 15 GENIC heterozygous 58623687 3 129497268 129497269 G GGTGTGTGTGT 11 GENIC heterozygous 58695685 3 129497268 129497269 G GGTGTGTGTGTGT 11 GENIC possibly homozygous 58695686 3 129497492 129497493 G A 33 GENIC homozygous 57669764 3 129497931 129497932 C A 36 GENIC homozygous 57669766 3 129498411 129498412 G A 31 GENIC homozygous 57669768 3 129498798 129498800 AA -- 13 GENIC heterozygous 57669770 3 129498799 129498800 A - 13 GENIC heterozygous 57669772 3 129503559 129503560 T C 24 GENIC homozygous 57669782 3 129504031 129504032 A AAT 11 GENIC homozygous 57669788 3 129504536 129504539 TGT --- 14 GENIC homozygous 57669790 3 129506513 129506514 A G 26 GENIC homozygous 57669792 3 129506641 129506644 CTT --- 11 GENIC homozygous 57669796 3 129506878 129506879 C CT 4 GENIC heterozygous 58695687 3 129506896 129506897 A T 18 GENIC homozygous 57669800 3 129507061 129507062 G C 35 GENIC homozygous 57669802 3 129507495 129507496 A G 30 GENIC homozygous 57669804 3 129508067 129508083 TATGTATGTATGTATG ---------------- 12 GENIC heterozygous 58695688 3 129508071 129508083 TATGTATGTATG ------------ 12 GENIC heterozygous 58695689 3 129508629 129508630 A G 41 GENIC homozygous 57669808 3 129508788 129508789 T C 30 GENIC homozygous 57669810 3 129508844 129508845 C T 28 GENIC homozygous 57669812 3 129509742 129509743 C G 19 GENIC homozygous 57669818 3 129510058 129510059 G A 35 GENIC homozygous 57669820 3 129510397 129510398 A ACAGT 41 GENIC homozygous 57669822 3 129510841 129510842 A T 35 GENIC homozygous 57669824 3 129510848 129510849 G A 32 GENIC homozygous 57669826 3 129511441 129511442 C CT 24 GENIC possibly homozygous 57669828 3 129511876 129511877 G A 51 GENIC homozygous 57669830 3 129512020 129512044 GTGTGTGTGTGTGTGTGTGTGTGT ------------------------ 14 GENIC possibly homozygous 58695690 3 129512244 129512248 GTGT ---- 21 GENIC homozygous 57669834 3 129512274 129512278 GTGA ---- 32 GENIC homozygous 57669838 3 129512508 129512510 TG -- 5 GENIC heterozygous 58695691 3 129512815 129512817 AT -- 23 GENIC homozygous 57669840 3 129513257 129513263 TTTTTT ------ 2 GENIC homozygous 58695692 3 129513298 129513299 A G 14 GENIC homozygous 57669844 3 129514116 129514117 C T 31 GENIC homozygous 57669846 3 129514138 129514139 A T 36 GENIC homozygous 57669848 3 129514252 129514253 C - 37 GENIC homozygous 57669850 3 129515392 129515393 G GT 27 GENIC homozygous 57669852 3 129515916 129515920 AACA ---- 15 GENIC homozygous 57669854 3 129515976 129515977 C - 27 GENIC homozygous 57669856 3 129515987 129515988 T G 30 GENIC homozygous 57669858 3 129516755 129516759 ACAA ---- 14 GENIC heterozygous 58809120 3 129516757 129516759 AA -- 10 GENIC heterozygous 57669860 3 129516771 129516772 C T 33 GENIC homozygous 57669862 3 129516793 129516794 T C 34 GENIC homozygous 57669864 3 129517181 129517182 G A 26 GENIC homozygous 57669866 3 129517182 129517183 C A 27 GENIC homozygous 57669868 3 129517390 129517443 AGAAGTTTATGGAAGCTTTCTATAACCTAGACATATACTCAGAACTTTTAAAG ----------------------------------------------------- 22 GENIC homozygous 58695693 3 129517921 129517922 A T 35 GENIC homozygous 57669874 3 129518475 129518476 C T 37 GENIC homozygous 57669876 3 129519142 129519143 A G 22 GENIC homozygous 57669877 3 129519165 129519166 T G 23 GENIC homozygous 57669879 3 129519171 129519173 GG -- 24 GENIC homozygous 57669881 3 129519361 129519363 TT -- 13 GENIC possibly homozygous 57669883 3 129519859 129519860 G A 25 GENIC homozygous 57669887 3 129519923 129519924 A G 22 GENIC homozygous 57669889 3 129520753 129520754 A G 36 GENIC homozygous 57669891 3 129521426 129521427 T TCTC 1 GENIC homozygous 57669895 3 129522640 129522641 G A 26 GENIC homozygous 57669899 3 129522693 129522694 T C 22 GENIC homozygous 57669901 3 129523971 129523972 G A 24 GENIC homozygous 57669903 3 129526765 129526769 TTGG ---- 13 GENIC homozygous 57669905 3 129527167 129527168 A C 28 GENIC homozygous 57669907 3 129527213 129527214 T - 17 GENIC possibly homozygous 57669909 3 129527328 129527329 A G 31 GENIC homozygous 57669911 3 129527564 129527607 TGTCCCTCATGGTATTCTACTGTTCCAAGTCAGCTAGACTGGG ------------------------------------------- 27 GENIC homozygous 58695694 3 129527802 129527803 A T 27 GENIC homozygous 57669921 3 129531569 129531570 C T 34 GENIC homozygous 57669933 3 129527937 129527938 G GGCAA 17 GENIC homozygous 57669923 3 129528130 129528131 C T 29 GENIC homozygous 57669925 3 129529772 129529773 A T 32 GENIC homozygous 57669927 3 129529842 129529843 T G 28 GENIC homozygous 57669929 3 129531345 129531346 C T 37 GENIC homozygous 57669931 3 129508063 129508083 TATGTATGTATGTATGTATG -------------------- 12 GENIC heterozygous 59332802 3 129531780 129531781 T C 32 GENIC homozygous 57669935 3 129531992 129531993 C CA 4 GENIC homozygous 58623691 3 129532659 129532660 G A 15 GENIC homozygous 57669939 3 129532752 129532753 T TA 26 GENIC homozygous 57669941 3 129533630 129533631 C T 33 GENIC homozygous 57669943 3 129534686 129534687 T TTTCGAGGA 18 GENIC homozygous 57669947 3 129534811 129534812 G GT 9 GENIC homozygous 57669949 3 129535103 129535104 A G 39 GENIC homozygous 57669951 3 129535781 129535782 A G 24 GENIC homozygous 57669953 3 129536350 129536351 T C 31 GENIC homozygous 57669955 3 129536370 129536371 A AC 27 GENIC homozygous 57669957 3 129536775 129536789 GTGTGTGTGTGTGT -------------- 9 GENIC heterozygous 58695695 3 129537488 129537489 A G 26 GENIC homozygous 57669959 3 129537763 129537764 A G 25 GENIC homozygous 57669961 3 129537896 129537897 C CT 3 GENIC homozygous 57669963 3 129538318 129538319 T - 30 GENIC homozygous 57669965 3 129538401 129538402 T C 35 GENIC homozygous 57669967 3 129538439 129538440 T C 36 GENIC homozygous 57669969 3 129538569 129538570 C T 31 GENIC homozygous 57669971 3 129539253 129539254 T C 22 GENIC homozygous 57669973 3 129539797 129539798 A G 24 GENIC homozygous 57669975 3 129539803 129539804 C T 22 GENIC homozygous 57669977 3 129539991 129539992 T C 25 GENIC homozygous 57669979 3 129540403 129540404 A G 17 GENIC homozygous 57669981 3 129540598 129540599 T C 5 GENIC homozygous 57669983 3 129540656 129540657 A - 12 GENIC homozygous 57669985 3 129540908 129540914 CACACA ------ 16 GENIC homozygous 57669987 3 129540988 129540989 A G 20 GENIC homozygous 57669989 3 129541215 129541216 T A 29 GENIC homozygous 57669991 3 129542412 129542413 C T 41 GENIC homozygous 57669993 3 129543319 129543320 A G 23 GENIC homozygous 57669995 3 129543915 129543916 G A 27 GENIC homozygous 57669997 3 129544432 129544433 G GTA 18 GENIC homozygous 57669999 3 129544459 129544460 T TAC 21 GENIC homozygous 57670004 3 129544680 129544681 A G 19 GENIC homozygous 57670006 3 129545913 129545914 G A 16 GENIC homozygous 57670008 3 129546074 129546075 T TG 2 GENIC heterozygous 57670010 3 129546659 129546660 A G 34 GENIC homozygous 57670012 3 129547284 129547285 T TAC 17 GENIC homozygous 57670014 3 129547390 129547391 C T 11 GENIC homozygous 57670016 3 129547654 129547655 A AAT 3 GENIC homozygous 57670018 3 129548313 129548314 C A 35 GENIC homozygous 57670020 3 129550269 129550270 G GTTTATTTCCGC 31 GENIC homozygous 57670022 3 129550277 129550278 T TC 33 GENIC homozygous 57670024 3 129550281 129550282 G T 34 GENIC homozygous 57670026 3 129550850 129550851 A G 30 GENIC homozygous 57670028 3 129550984 129550985 G A 31 GENIC homozygous 57670030 3 129551593 129551594 A G 38 GENIC homozygous 57670032 3 129551924 129551925 A C 31 GENIC homozygous 57670034 3 129551988 129551989 A C 43 GENIC homozygous 57670036 3 129552103 129552104 A G 36 GENIC homozygous 57670038 3 129552106 129552107 C T 36 GENIC homozygous 57670040 3 129552138 129552139 G C 39 GENIC homozygous 57670042 3 129552392 129552393 T C 22 GENIC homozygous 57670044 3 129552782 129552783 C - 8 GENIC heterozygous 57670048 3 129553426 129553427 C G 21 GENIC homozygous 57670050 3 129553748 129553749 A G 16 GENIC homozygous 57670052 3 129553758 129553759 C CTTTTTTTTTTTTTT 21 GENIC homozygous 58623692 3 129555244 129555245 A G 10 GENIC homozygous 57670054 3 129556170 129556171 T - 24 GENIC homozygous 57670056 3 129556171 129556172 T G 25 GENIC possibly homozygous 58695696 3 129557582 129557583 T A 41 GENIC homozygous 57670059 3 129557773 129557777 GTTT ---- 27 GENIC homozygous 57670061 3 129559409 129559410 T TACAC 23 GENIC heterozygous 57670065 3 129559409 129559410 T TAC 23 GENIC heterozygous 58037296 3 129559814 129559815 G A 21 GENIC homozygous 57670067 3 129560853 129560854 C T 27 GENIC homozygous 57670069 3 129560934 129560935 T TTCCATTG 33 GENIC homozygous 57670071 3 129562457 129562458 G A 22 GENIC homozygous 57670073 3 129562507 129562508 C T 21 GENIC homozygous 57670075 3 129562889 129562890 G A 19 GENIC homozygous 57670077 3 129564149 129564150 G A 38 GENIC homozygous 57670079 3 129564588 129564589 A G 28 GENIC homozygous 57670080 3 129564667 129564668 A G 40 GENIC homozygous 57670082 3 129565375 129565376 T C 36 GENIC homozygous 57670084 3 129567987 129567988 T C 24 GENIC homozygous 57670088 3 129568591 129568592 A G 34 GENIC homozygous 57670090 3 129568765 129568766 C T 22 GENIC homozygous 57670092 3 129569215 129569216 G A 32 GENIC homozygous 57670094 3 129570216 129570290 CCCGTCTCCCTGCCCCAGCTCCCGTCTCCCTCCCCGCTCCCGTCTCCCTCCCCGCTCCCGTCTCCCTGCTCGCC -------------------------------------------------------------------------- 11 GENIC homozygous 58560470 3 129570311 129570312 G A 7 GENIC homozygous 57670110 3 129570341 129570379 GCTCCCGTCTCCCTGCCCGCTCCCGTCTCCCTGCCCCA -------------------------------------- 8 GENIC homozygous 58672092 3 129570945 129570946 G A 33 GENIC homozygous 57670116 3 129571876 129571878 AA -- 23 GENIC homozygous 57670120 3 129572517 129572518 T G 23 GENIC homozygous 57670124 3 129572797 129572798 G A 33 GENIC homozygous 57670126 3 129573234 129573235 T C 27 GENIC homozygous 57670127 3 129573820 129573939 AGAAAAGAACAGAGTAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAAGCCCTGGGTTCGGTCCCCAGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ----------------------------------------------------------------------------------------------------------------------- 28 GENIC homozygous 58560471 3 129575155 129575156 A AT 31 GENIC homozygous 57670129 3 129575180 129575181 T C 31 GENIC homozygous 57670131 3 129575289 129575290 C CAAAA 11 GENIC homozygous 57670133 3 129576184 129576185 T C 35 GENIC homozygous 57670135 3 129576406 129576407 T C 28 GENIC homozygous 57670137 3 129576556 129576558 AA -- 23 GENIC homozygous 57670139 3 129576967 129576968 G A 29 GENIC homozygous 57670143 3 129577099 129577108 TTGTTGTTG --------- 2 GENIC heterozygous 57670145 3 129577129 129577131 GG -- 3 GENIC heterozygous 58652583 3 129577132 129577134 TG -- 3 GENIC heterozygous 58652584 3 129577133 129577134 G GTT 8 GENIC heterozygous 57670155 3 129577377 129577378 G GC 34 GENIC homozygous 57670157 3 129579866 129579867 C - 1 GENIC homozygous 58809122 3 129580487 129580503 ACACACACACACACAG ---------------- 8 GENIC heterozygous 58695697 3 129580489 129580503 ACACACACACACAG -------------- 8 GENIC heterozygous 58695698 3 129580509 129580510 T G 23 GENIC homozygous 57670160 3 129580682 129580683 T G 29 GENIC homozygous 57670162 3 129580804 129580805 T C 27 GENIC homozygous 57670164 3 129582158 129582159 T - 12 GENIC heterozygous 58392662 3 129580961 129580962 T A 39 GENIC homozygous 57670166 3 129581681 129581682 A G 28 GENIC homozygous 57670168 3 129581843 129581844 A G 51 GENIC homozygous 57670170 3 129582157 129582158 G GT 12 GENIC heterozygous 57670172 3 129582157 129582158 G GTT 12 GENIC heterozygous 58623702 3 129536773 129536789 GTGTGTGTGTGTGTGT ---------------- 9 GENIC heterozygous 58952905 3 129539154 129539158 TCTC ---- 7 GENIC heterozygous 58952907