chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 51478347 51478348 T G 7 GENIC homozygous 57374021 3 51478352 51478353 C T 7 GENIC homozygous 57374023 3 51478458 51478461 TTT --- 15 GENIC heterozygous 57374025 3 51478459 51478461 TT -- 15 GENIC possibly homozygous 57374027 3 51478721 51478731 AAACAAAACA ---------- 18 GENIC homozygous 57374029 3 51480111 51480112 T C 35 GENIC homozygous 57374035 3 51480387 51480388 G - 17 GENIC homozygous 57374040 3 51480428 51480429 C T 27 GENIC homozygous 57374042 3 51480640 51480641 A T 30 GENIC homozygous 57374044 3 51483838 51483839 G T 13 GENIC homozygous 57374046 3 51484684 51484685 C A 40 GENIC homozygous 57374048 3 51485762 51485763 C T 29 GENIC possibly homozygous 57374052 3 51488892 51488893 C T 25 GENIC homozygous 57374054 3 51490247 51490249 AC -- 25 GENIC homozygous 57374058 3 51490248 51490249 C G 22 GENIC homozygous 57374060 3 51491034 51491035 A AAACC 17 GENIC homozygous 57374062 3 51493647 51493648 A AAAAC 9 GENIC possibly homozygous 57374066 3 51493647 51493648 A AAAC 9 GENIC heterozygous 57374068 3 51493659 51493660 A C 11 GENIC homozygous 57374070 3 51494169 51494170 G A 19 GENIC homozygous 57374072 3 51494293 51494294 C T 9 GENIC homozygous 57374074 3 51494296 51494297 C CA 9 GENIC homozygous 57374077 3 51494795 51494796 C T 31 GENIC homozygous 57374079 3 51494839 51494840 T C 35 GENIC homozygous 57374081 3 51494977 51494978 T C 22 GENIC homozygous 57374083 3 51496428 51496429 T C 3 GENIC homozygous 57374089 3 51497249 51497250 G C 14 GENIC homozygous 57374091 3 51497794 51497795 T C 25 GENIC homozygous 57374093 3 51497956 51497957 C T 29 GENIC homozygous 57374095 3 51498436 51498437 T C 27 GENIC homozygous 57374097 3 51499034 51499035 G GA 7 GENIC homozygous 57374098 3 51499205 51499206 G GGGA 9 GENIC homozygous 57374100 3 51499330 51499331 G T 30 GENIC homozygous 57374101 3 51499351 51499352 G A 32 GENIC homozygous 57374102 3 51499383 51499384 T C 30 GENIC homozygous 57374103 3 51499653 51499654 T C 27 GENIC homozygous 57374104 3 51499734 51499735 A G 22 GENIC homozygous 57374105 3 51499761 51499762 T C 19 GENIC homozygous 57374106 3 51499850 51499851 C T 29 GENIC homozygous 57374107 3 51499869 51499870 A G 31 GENIC homozygous 57374108 3 51499881 51499882 T C 31 GENIC homozygous 57374109 3 51500041 51500042 C T 24 GENIC homozygous 57374110 3 51500042 51500043 A G 24 GENIC homozygous 57374111 3 51500382 51500383 C G 31 GENIC homozygous 57374112 3 51500487 51500488 C T 24 GENIC homozygous 57374113 3 51500493 51500494 T C 26 GENIC homozygous 57374114 3 51500567 51500568 C T 28 GENIC homozygous 57374115 3 51500577 51500578 A G 24 GENIC homozygous 57374116 3 51500736 51500737 C T 15 GENIC homozygous 57374117 3 51500789 51500790 C T 27 GENIC homozygous 57374118 3 51500825 51500826 T A 31 GENIC homozygous 57374119 3 51501055 51501056 A G 24 GENIC homozygous 57374120 3 51501462 51501463 C CCA 16 GENIC homozygous 57374121 3 51501857 51501858 G A 12 GENIC homozygous 57374123 3 51501875 51501876 A ATGATGTG 20 GENIC homozygous 57374124 3 51501902 51501903 C G 32 GENIC homozygous 57374126 3 51501918 51501924 GAGAGA ------ 22 GENIC heterozygous 57374127 3 51501920 51501924 GAGA ---- 22 GENIC possibly homozygous 57374128 3 51495998 51495999 A ACACACACACACACACACACG 10 GENIC possibly homozygous 58582664 3 51497966 51497967 A - 26 GENIC homozygous 58582665 3 51501481 51501490 TACTACTAC --------- 8 GENIC possibly homozygous 58582666 3 51501478 51501490 TACTACTACTAC ------------ 8 GENIC heterozygous 58648944 3 51501928 51501929 T C 29 GENIC homozygous 57374129 3 51502051 51502052 G GTA 19 GENIC possibly homozygous 57374131 3 51502167 51502168 A G 50 GENIC homozygous 57374132 3 51502256 51502257 T G 42 GENIC homozygous 57374133 3 51502319 51502320 G GGC 45 GENIC homozygous 57374134 3 51502426 51502427 T TATGTCAGAAGAC 29 GENIC homozygous 57374135 3 51502465 51502466 T C 37 GENIC homozygous 57374136 3 51502529 51502530 C CAGAA 26 GENIC homozygous 57374137 3 51502558 51502559 G A 25 GENIC homozygous 57374138 3 51502755 51502756 T C 22 GENIC homozygous 57374139 3 51503010 51503011 T G 23 GENIC homozygous 57374140 3 51503541 51503542 T G 14 GENIC homozygous 57374141 3 51503804 51503805 G A 14 GENIC homozygous 57374142 3 51504650 51504652 AA -- 14 GENIC possibly homozygous 57374143 3 51504662 51504663 A - 12 GENIC homozygous 57374144 3 51504982 51504983 G T 21 GENIC homozygous 57374145 3 51505055 51505056 G - 19 GENIC homozygous 57374146 3 51505193 51505194 G A 31 GENIC homozygous 57374147 3 51505275 51505280 GCTGG ----- 15 GENIC homozygous 57374148 3 51506682 51506683 T G 22 GENIC homozygous 57374154 3 51505420 51505421 C T 24 GENIC homozygous 57374149 3 51505505 51505506 A G 18 GENIC homozygous 57374150 3 51505610 51505611 T G 16 GENIC homozygous 57374151 3 51505844 51505845 C T 11 GENIC homozygous 57374152 3 51506085 51506086 C T 21 GENIC homozygous 57374153 3 51506814 51506815 A G 39 GENIC homozygous 57374155 3 51509595 51509596 T C 23 GENIC homozygous 57374159 3 51508117 51508118 C CAT 10 GENIC possibly homozygous 57374156 3 51508754 51508755 C T 36 GENIC homozygous 57374157 3 51509290 51509291 T C 31 GENIC homozygous 57374158 3 51509895 51509896 G T 19 GENIC homozygous 57374160 3 51509985 51509986 C T 19 GENIC homozygous 57374161 3 51510682 51510683 T C 18 GENIC homozygous 57374162 3 51510951 51510952 T A 28 GENIC homozygous 57374163 3 51511756 51511757 T C 15 GENIC homozygous 57374164 3 51511940 51511941 G A 17 GENIC homozygous 57374165 3 51512122 51512123 C T 7 GENIC homozygous 57374166 3 51512453 51512454 T C 12 GENIC homozygous 57374167 3 51512479 51512480 G GCCCCCCC 6 GENIC homozygous 58582668 3 51512663 51512665 AT -- 24 GENIC homozygous 57374170 3 51512672 51512673 C T 25 GENIC homozygous 57374171 3 51512699 51512700 G T 28 GENIC possibly homozygous 57374172 3 51512734 51512735 G C 30 GENIC homozygous 57374173 3 51513047 51513048 C G 22 GENIC homozygous 57374174 3 51513317 51513318 C CA 26 GENIC homozygous 57374175 3 51513501 51513502 A G 16 GENIC homozygous 57374176 3 51513662 51513663 C T 23 GENIC homozygous 57374177 3 51514093 51514094 A C 27 GENIC homozygous 57374178 3 51514195 51514196 C G 14 GENIC homozygous 57374179 3 51514336 51514337 G A 21 GENIC homozygous 57374180 3 51514666 51514667 A G 27 GENIC homozygous 57374181 3 51515473 51515474 A T 32 GENIC homozygous 57374182 3 51516176 51516177 G A 31 GENIC homozygous 57374183 3 51517504 51517505 A G 38 GENIC homozygous 57374184 3 51518059 51518063 AGGA ---- 22 GENIC homozygous 57374185 3 51518316 51518317 A AACACACACACACACAC 10 GENIC homozygous 58582669 3 51518798 51518799 C CCA 12 GENIC homozygous 57374186 3 51519189 51519190 A G 15 GENIC homozygous 57374187 3 51519442 51519443 A G 28 GENIC homozygous 57374188 3 51520236 51520237 C A 23 GENIC homozygous 57374189 3 51520248 51520254 CACACA ------ 10 GENIC homozygous 57374190 3 51520357 51520359 TT -- 17 GENIC homozygous 57374191 3 51520368 51520369 T - 18 GENIC homozygous 57374192 3 51520850 51520851 C T 30 GENIC homozygous 57374193 3 51521123 51521124 T C 20 GENIC homozygous 57374194 3 51521258 51521259 G A 12 GENIC homozygous 57374195 3 51521434 51521435 A T 20 GENIC homozygous 57374196 3 51521498 51521499 C T 18 GENIC homozygous 57374197 3 51521589 51521590 C G 25 GENIC homozygous 57374198 3 51521704 51521705 G GA 5 GENIC homozygous 57374199 3 51521727 51521729 AC -- 3 GENIC homozygous 57374200 3 51521746 51521747 C - 7 GENIC homozygous 57374204 3 51521748 51521749 A C 7 GENIC homozygous 58582670 3 51522618 51522619 C T 35 GENIC possibly homozygous 57374208 3 51521778 51521779 A ACAAAACAGAG 11 GENIC homozygous 57374205 3 51522119 51522120 C T 21 GENIC possibly homozygous 57374206 3 51522366 51522367 C T 14 GENIC homozygous 57374207 3 51522916 51522918 TC -- 42 GENIC homozygous 57374211 3 51522960 51522962 TG -- 42 GENIC homozygous 57374212 3 51523127 51523129 AA -- 9 GENIC homozygous 57374213 3 51523511 51523512 T C 22 GENIC homozygous 57374214 3 51523646 51523647 T - 15 GENIC homozygous 57374215 3 51523940 51523941 G A 22 GENIC homozygous 57374216 3 51523962 51523963 G A 21 GENIC homozygous 57374217 3 51524307 51524308 G T 23 GENIC homozygous 57374218 3 51524308 51524309 A T 22 GENIC homozygous 57374219 3 51524473 51524474 T C 24 GENIC homozygous 57374220 3 51524512 51524513 T C 22 GENIC homozygous 57374221 3 51524587 51524603 TGTGTGTGTGTGTGTG ---------------- 25 GENIC homozygous 57374222 3 51524624 51524625 G A 24 GENIC homozygous 57374223 3 51524854 51524855 G A 21 GENIC homozygous 57374224 3 51524890 51524891 A G 19 GENIC homozygous 57374225 3 51525115 51525116 A G 11 GENIC homozygous 57374226 3 51525153 51525154 A AT 6 GENIC homozygous 57374227 3 51525234 51525235 C T 3 GENIC homozygous 58582671 3 51525236 51525237 C CTTGCT 3 GENIC homozygous 58582672 3 51525239 51525240 G GCAAGCGCTCTACCACTGAGCTAAATCCCCA 3 GENIC homozygous 58582673 3 51525291 51525292 A G 6 GENIC homozygous 57374228 3 51525298 51525299 A C 7 GENIC homozygous 57374229 3 51525673 51525674 T C 23 GENIC homozygous 57374230 3 51525725 51525726 C T 30 GENIC homozygous 57374231 3 51525963 51525964 G GAA 11 GENIC homozygous 57374232 3 51525991 51525992 C CAAAAAAAAAAAAAAAAA 20 GENIC heterozygous 58582674 3 51525993 51525997 AAAA ---- 20 GENIC possibly homozygous 57374236 3 51526047 51526048 C T 21 GENIC homozygous 57374237 3 51526124 51526125 T C 12 GENIC homozygous 57374238 3 51526520 51526521 C CGTGTGTGT 8 GENIC heterozygous 58582675 3 51526520 51526521 C CGTGTGTGTGT 8 GENIC heterozygous 58582676 3 51526520 51526521 C CGTGTGTGTGTGTGTGT 8 GENIC heterozygous 58853477 3 51526597 51526598 T C 27 GENIC homozygous 57374240 3 51526603 51526604 T C 30 GENIC homozygous 57374241 3 51526683 51526684 G A 28 GENIC homozygous 57374242 3 51527290 51527291 A - 8 GENIC homozygous 57374243 3 51527802 51527803 C T 36 GENIC homozygous 57374244 3 51528565 51528566 C CA 12 GENIC possibly homozygous 58582677 3 51529042 51529044 GA -- 8 GENIC heterozygous 58582678 3 51529043 51529044 A ATTTTTTTTTT 8 GENIC heterozygous 58582679 3 51529097 51529098 G A 8 GENIC homozygous 57374245 3 51530289 51530301 AGAGACAGAGAC ------------ 19 GENIC heterozygous 58648947 3 51530291 51530301 AGACAGAGAC ---------- 19 GENIC heterozygous 58582680 3 51530409 51530421 ACACAGAAAGAG ------------ 5 GENIC homozygous 58582681 3 51530757 51530758 C A 36 GENIC homozygous 57374249 3 51533422 51533423 G GTT 16 GENIC heterozygous 57374255 3 51531050 51531051 A C 38 GENIC homozygous 57374250 3 51531923 51531924 A T 30 GENIC homozygous 58582682 3 51531924 51531925 C A 29 GENIC homozygous 57888257 3 51532150 51532151 G GTTTTGTTTTC 33 GENIC homozygous 57374253 3 51533422 51533423 G GTTT 16 GENIC possibly homozygous 57374254 3 51529021 51529022 G GTTTT 7 GENIC heterozygous 58667437 3 51536167 51536168 T TATGG 24 GENIC homozygous 57374256 3 51537710 51537711 C T 31 GENIC homozygous 57374257 3 51537870 51537871 T C 30 GENIC homozygous 57374258 3 51537903 51537904 T C 26 GENIC homozygous 57374259 3 51538016 51538017 C A 21 GENIC homozygous 57374260 3 51538298 51538308 AGCTTAATAA ---------- 3 GENIC homozygous 57374261 3 51538494 51538504 AGCTTAATAA ---------- 14 GENIC homozygous 57374262 3 51538664 51538665 C T 15 GENIC homozygous 57374265 3 51538894 51538895 C CTT 13 GENIC homozygous 57374266 3 51539069 51539070 G A 18 GENIC homozygous 57374267 3 51539258 51539259 A G 24 GENIC homozygous 57374268 3 51539498 51539499 A G 25 GENIC homozygous 57374269 3 51539563 51539569 GTGTGT ------ 14 GENIC possibly homozygous 58648949 3 51539594 51539595 A G 31 GENIC homozygous 57374271 3 51539606 51539607 G C 29 GENIC homozygous 57374272 3 51539717 51539718 C T 26 GENIC homozygous 57374273 3 51539807 51539808 C CA 30 GENIC homozygous 57374275 3 51539808 51539809 C CACA 30 GENIC homozygous 58582684 3 51539827 51539828 C T 29 GENIC homozygous 57374279 3 51540071 51540072 A G 23 GENIC homozygous 57374280 3 51540287 51540288 T A 16 GENIC homozygous 57374281 3 51541951 51541952 C T 16 GENIC homozygous 57374283 3 51542061 51542062 A G 8 GENIC homozygous 57374284 3 51542097 51542098 T C 6 GENIC homozygous 57374285 3 51542190 51542191 T TACACAC 14 GENIC possibly homozygous 57374286 3 51542190 51542191 T TAC 14 GENIC heterozygous 58420351 3 51542552 51542570 GTGTGTGTGTGTGTGTGT ------------------ 18 GENIC heterozygous 58582685 3 51542554 51542570 GTGTGTGTGTGTGTGT ---------------- 18 GENIC possibly homozygous 58582686 3 51543304 51543305 T A 24 GENIC homozygous 57374287 3 51543536 51543537 G T 17 GENIC homozygous 57374288 3 51543594 51543595 T A 22 GENIC homozygous 57374289 3 51543771 51543772 C T 37 GENIC homozygous 57374290 3 51544469 51544474 TTTTT ----- 22 GENIC homozygous 57374291 3 51544761 51544762 C - 20 GENIC homozygous 57374292 3 51544785 51544786 C T 28 GENIC homozygous 57374293 3 51545055 51545056 C G 28 GENIC homozygous 57374294 3 51546180 51546181 T C 9 GENIC homozygous 57374296 3 51546583 51546584 C T 29 GENIC homozygous 57374297 3 51546718 51546719 C T 45 GENIC homozygous 57374298 3 51547152 51547295 CTCTAACTTGGTTTCTGTTTGTTTTTGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCCAAATCCCCAACCC ----------------------------------------------------------------------------------------------------------------------------------------------- 35 GENIC homozygous 58544588 3 51548637 51548638 A G 29 GENIC homozygous 57374299 3 51549415 51549416 G A 25 GENIC homozygous 57374300 3 51549481 51549482 A - 16 GENIC homozygous 57374301 3 51549947 51549948 A G 32 GENIC homozygous 57374302 3 51550118 51550119 G - 24 GENIC homozygous 57374303 3 51550218 51550219 T C 32 GENIC homozygous 57374304 3 51550240 51550241 T A 29 GENIC homozygous 57374305 3 51550449 51550450 T - 15 GENIC homozygous 57374306 3 51551853 51551854 A G 17 GENIC homozygous 57374311 3 51550620 51550621 C T 21 GENIC homozygous 57374307 3 51550638 51550639 G T 25 GENIC homozygous 57374308 3 51551541 51551542 A G 17 GENIC homozygous 57374309 3 51551648 51551649 G C 26 GENIC homozygous 57374310 3 51551860 51551861 T C 19 GENIC homozygous 57374312 3 51552181 51552182 A G 27 GENIC homozygous 57374313 3 51552191 51552192 A G 30 GENIC homozygous 57374314 3 51552217 51552218 A G 37 GENIC homozygous 57374315 3 51552222 51552223 T G 35 GENIC homozygous 57374316 3 51552246 51552247 A G 32 GENIC homozygous 57374317 3 51552794 51552795 G A 21 GENIC homozygous 57374318 3 51552922 51552923 C CAAAA 8 GENIC heterozygous 57374319 3 51552922 51552923 C CAAA 8 GENIC possibly homozygous 57374320 3 51553008 51553009 A ATGCTGCTTCTGCTGCTTC 18 GENIC homozygous 58582687 3 51553403 51553404 G A 40 GENIC homozygous 57374321 3 51553738 51553739 G GT 16 GENIC homozygous 57374322 3 51555032 51555050 TCTCTCTCTCTTTCTCTC ------------------ 11 GENIC heterozygous 58803883 3 51555036 51555050 TCTCTCTTTCTCTC -------------- 11 GENIC heterozygous 58648951 3 51555180 51555181 G A 25 GENIC homozygous 57374323 3 51556452 51556453 C T 29 GENIC homozygous 57374324 3 51556504 51556505 C T 23 GENIC homozygous 57374325 3 51556616 51556617 A G 35 GENIC homozygous 57374326 3 51556815 51556816 A G 43 GENIC homozygous 57374327 3 51556836 51556837 G A 34 GENIC homozygous 57374328 3 51556930 51556931 G A 21 GENIC homozygous 57374329 3 51557044 51557045 G GT 13 GENIC homozygous 57374330 3 51557402 51557403 A G 21 GENIC homozygous 57374331 3 51557920 51557921 T G 34 GENIC homozygous 57374332 3 51558018 51558019 T C 34 GENIC homozygous 57374333 3 51558092 51558093 T A 34 GENIC homozygous 57374334 3 51558612 51558613 T G 17 GENIC homozygous 57374335 3 51559854 51559855 T TTTTTGTTTTG 20 GENIC homozygous 57374336 3 51560098 51560118 ACACACACACACACACACAC -------------------- 10 GENIC homozygous 58582689 3 51560957 51560958 G A 19 GENIC homozygous 57374337 3 51562038 51562039 T C 20 GENIC homozygous 57374338 3 51562071 51562075 TGTT ---- 19 GENIC homozygous 57374339 3 51562295 51562296 C T 29 GENIC homozygous 57374340 3 51563183 51563193 ACACACACAC ---------- 3 GENIC heterozygous 57374341 3 51563285 51563286 G A 34 GENIC homozygous 58582690 3 51563325 51563326 A AC 34 GENIC homozygous 57374346 3 51563378 51563379 A G 29 GENIC homozygous 57374347 3 51563436 51563437 C - 17 GENIC homozygous 57374348 3 51563614 51563615 A G 31 GENIC homozygous 57374349 3 51563680 51563681 A G 40 GENIC homozygous 57374350 3 51563732 51563733 C T 42 GENIC homozygous 57374351 3 51563792 51563793 A G 27 GENIC homozygous 57374352 3 51563964 51563965 C - 14 GENIC homozygous 57374353 3 51563992 51563993 C CA 17 GENIC homozygous 57374354 3 51564106 51564107 T C 15 GENIC homozygous 57374355 3 51564112 51564113 T G 16 GENIC homozygous 57374356 3 51564122 51564123 A G 20 GENIC homozygous 57374357 3 51564979 51564980 C T 28 GENIC homozygous 57374358 3 51565127 51565128 C T 44 GENIC homozygous 57374359 3 51565300 51565301 C G 27 GENIC homozygous 57374360