chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 54958584 54958585 A AT 11 GENIC possibly homozygous 58453578 3 54960446 54960447 T - 3 GENIC homozygous 57888446 3 54963705 54963706 A C 22 GENIC homozygous 58506870 3 54963926 54963927 A G 22 GENIC homozygous 58358210 3 54964409 54964410 G A 23 GENIC homozygous 58506872 3 54965519 54965520 C T 17 GENIC homozygous 58506874 3 54965992 54965993 G A 17 GENIC homozygous 58506876 3 54966062 54966063 C - 16 GENIC homozygous 58506878 3 54967530 54967531 C T 33 GENIC homozygous 58358216 3 54967861 54967862 G A 19 GENIC homozygous 58506880 3 54967928 54967929 T C 16 GENIC homozygous 58506881 3 54968075 54968076 G C 19 GENIC homozygous 58358218 3 54969880 54969881 C CT 7 GENIC homozygous 58358222 3 54970553 54970554 A G 14 GENIC homozygous 58506889 3 54970775 54970776 T - 17 GENIC homozygous 58506891 3 54970905 54970906 G A 15 GENIC homozygous 58358226 3 54971019 54971020 A G 12 GENIC homozygous 58358228 3 54971810 54971811 C T 11 GENIC homozygous 58506893 3 54971935 54971936 C T 29 GENIC homozygous 58506895 3 54971936 54971937 G A 29 GENIC homozygous 58506897 3 54972072 54972073 A G 15 GENIC homozygous 58358231 3 54972343 54972344 A T 22 GENIC homozygous 58506899 3 54973410 54973411 C T 15 GENIC homozygous 58506901 3 54973602 54973603 A G 22 GENIC homozygous 58358239 3 54974077 54974078 G A 14 GENIC homozygous 58506903 3 54974897 54974898 T C 29 GENIC homozygous 58358243 3 54975315 54975316 G T 20 GENIC homozygous 57377066 3 54975325 54975326 A T 19 GENIC homozygous 57377067 3 54975744 54975749 TCAAC ----- 16 GENIC homozygous 57377068 3 54975754 54975755 C A 15 GENIC homozygous 57377069 3 54975760 54975761 C A 16 GENIC homozygous 57377070 3 54975767 54975768 C - 17 GENIC homozygous 57377071 3 54976787 54976788 C T 19 GENIC homozygous 58506905 3 54976793 54976794 T C 16 GENIC homozygous 58358249 3 54977036 54977037 C T 22 GENIC homozygous 58506907 3 54977619 54977620 A AGTAAAGGACCT 36 GENIC homozygous 58358255 3 54978103 54978104 C A 7 GENIC possibly homozygous 58506909 3 54979082 54979083 C G 15 GENIC homozygous 58358263 3 54979325 54979326 G A 29 GENIC homozygous 58358265 3 54979366 54979367 T C 24 GENIC homozygous 58358267 3 54979388 54979389 A G 25 GENIC homozygous 58506911 3 54979557 54979558 G A 24 GENIC homozygous 58506913 3 54980233 54980234 C G 17 GENIC homozygous 58358269 3 54980343 54980344 A G 23 GENIC homozygous 58453668 3 54980665 54980666 G A 22 GENIC homozygous 58506915 3 54980668 54980669 G A 21 GENIC homozygous 58506917 3 54980744 54980745 C T 24 GENIC homozygous 58506919 3 54980796 54980797 A G 26 GENIC homozygous 58506921 3 54981074 54981075 T G 26 GENIC homozygous 58506923 3 54981186 54981187 T C 25 GENIC homozygous 58506925 3 54981603 54981604 T G 16 GENIC homozygous 58506927 3 54981800 54981801 G A 19 GENIC homozygous 58506929 3 54982161 54982162 A G 14 GENIC homozygous 58358273 3 54982409 54982410 T A 19 GENIC homozygous 58506933 3 54982474 54982475 C A 16 GENIC homozygous 58358275 3 54982680 54982681 C T 23 GENIC homozygous 58506935 3 54982712 54982713 A G 23 GENIC homozygous 58506937 3 54982811 54982812 G A 17 GENIC homozygous 58506939 3 54982918 54982919 A G 31 GENIC homozygous 58506941 3 54983151 54983152 G A 24 GENIC homozygous 58506943 3 54983174 54983175 A G 22 GENIC homozygous 58506945 3 54983215 54983216 G A 19 GENIC homozygous 58506947 3 54983265 54983266 T C 26 GENIC homozygous 58506949 3 54983361 54983362 A G 31 GENIC homozygous 58506951 3 54983502 54983503 A G 25 GENIC homozygous 58506952 3 54983631 54983632 T C 27 GENIC homozygous 58358277 3 54984469 54984470 A G 25 GENIC homozygous 58506956 3 54984156 54984157 T C 12 GENIC homozygous 58358281 3 54984382 54984383 A C 26 GENIC homozygous 58506954 3 54970088 54970089 G GAGAGAGAGAGAGAC 9 GENIC possibly homozygous 58804363 3 54970259 54970260 C CTGTG 8 GENIC homozygous 58804365 3 54975146 54975147 C CTGTG 8 GENIC homozygous 58804367 3 54978908 54978920 GAGAGAGAGAGA ------------ 5 GENIC homozygous 58804369 3 54982111 54982115 GTGT ---- 12 GENIC heterozygous 58804371 3 54984535 54984536 C CTGGG 33 GENIC homozygous 58506958 3 54984599 54984600 A G 40 GENIC homozygous 58506960 3 54985045 54985046 C T 24 GENIC homozygous 58506962 3 54985145 54985146 G A 34 GENIC homozygous 58506964 3 54985473 54985474 G T 15 GENIC homozygous 58506966 3 54985542 54985543 C T 16 GENIC homozygous 58506968 3 54985543 54985544 A G 16 GENIC homozygous 58506969 3 54986225 54986226 G GA 11 GENIC homozygous 58453676 3 54987272 54987273 G A 17 GENIC homozygous 58506971 3 54987362 54987364 AA -- 10 GENIC homozygous 58358289 3 54988641 54988642 A G 31 GENIC homozygous 58358293 3 54988998 54988999 T C 31 GENIC homozygous 58358295 3 54989052 54989053 G A 27 GENIC homozygous 58506973 3 54990078 54990079 A G 33 GENIC homozygous 58506975 3 54990647 54990648 A G 20 GENIC homozygous 58358299 3 54990808 54990809 A C 24 GENIC homozygous 58358301 3 54990820 54990821 C T 30 GENIC homozygous 58358303 3 54991318 54991320 AC -- 7 GENIC homozygous 57377075 3 54991585 54991586 A G 22 GENIC homozygous 58358305 3 54992705 54992706 A G 15 GENIC homozygous 58506977 3 54993042 54993043 T G 15 GENIC homozygous 58358309 3 54993198 54993199 C CCCAAG 21 GENIC homozygous 57377076 3 54994215 54994216 C A 23 GENIC homozygous 58506979 3 54996470 54996471 G T 24 GENIC homozygous 58506981 3 54997223 54997224 T C 26 GENIC homozygous 58358311 3 54998161 54998162 C T 19 GENIC homozygous 58506983 3 54998897 54998898 T TA 23 GENIC homozygous 58358319 3 54999697 54999698 G GA 11 GENIC homozygous 58453740 3 54999895 54999903 GTGCATGT -------- 11 GENIC homozygous 58804373 3 55002169 55002171 GG -- 3 GENIC homozygous 57888447 3 55002286 55002288 AA -- 13 GENIC possibly homozygous 58453748 3 55002287 55002288 A - 13 GENIC heterozygous 58804375 3 55002698 55002723 CCTCTGATGCTATCGGCGTAAGAAC ------------------------- 20 GENIC homozygous 58453750 3 55003374 55003375 T C 26 GENIC homozygous 58358327 3 55003718 55003719 G A 11 GENIC homozygous 58453752 3 55004309 55004322 ACTCATCTTTCTC ------------- 25 GENIC homozygous 58453754 3 55004365 55004366 A C 22 GENIC homozygous 58453756 3 55004525 55004526 T C 21 GENIC homozygous 58453758 3 55004697 55004698 T C 23 GENIC homozygous 58453760 3 55004812 55004813 G A 20 GENIC homozygous 58453762 3 55005452 55005456 TGTT ---- 3 GENIC homozygous 58804377 3 55006382 55006383 C T 11 GENIC homozygous 58453764 3 55006931 55006932 T - 21 GENIC homozygous 58453766 3 55006965 55006966 C T 23 GENIC possibly homozygous 58453768 3 55007769 55007770 T - 19 GENIC homozygous 58453770 3 55008028 55008029 T G 25 GENIC homozygous 58453772 3 55008286 55008287 G A 27 GENIC homozygous 58453774 3 55008440 55008441 G A 19 GENIC homozygous 58453778 3 55008543 55008544 T G 30 GENIC homozygous 58453780 3 55008644 55008645 C T 28 GENIC homozygous 58453782 3 55008849 55008850 T C 18 GENIC homozygous 58453784 3 55009007 55009008 G T 20 GENIC homozygous 58453786 3 55009016 55009017 G A 17 GENIC homozygous 58453788 3 55009298 55009299 G A 20 GENIC homozygous 58453790 3 55009405 55009406 T C 15 GENIC homozygous 58453791 3 55009590 55009591 A T 21 GENIC homozygous 58453793 3 55010001 55010002 G C 25 GENIC homozygous 58453795 3 55010253 55010254 A G 14 GENIC homozygous 58358337 3 55011908 55011909 T C 30 GENIC homozygous 58453797 3 55012022 55012025 ATG --- 25 GENIC homozygous 58358343 3 55013106 55013107 A G 27 GENIC homozygous 58453799 3 55013375 55013376 G C 26 GENIC homozygous 58453801 3 55013438 55013439 A G 14 GENIC homozygous 58453803 3 55013477 55013478 G A 19 GENIC homozygous 58453805 3 55014154 55014160 TGTGTA ------ 10 GENIC homozygous 58804379 3 55014556 55014557 G A 22 GENIC homozygous 58506985 3 55018539 55018540 T A 24 GENIC homozygous 58358359 3 55023073 55023074 A G 19 GENIC homozygous 58358380 3 55026872 55026873 T TCA 13 GENIC heterozygous 58453876 3 55031119 55031120 C T 21 GENIC homozygous 58506991 3 55032903 55032904 C CTGTGTGTG 6 GENIC homozygous 58804381 3 55034508 55034509 T C 34 GENIC homozygous 58358392 3 55036869 55036870 C CT 5 GENIC heterozygous 57888448