chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 52389327 52389328 A - 18 INTERGENIC homozygous 58684620 3 52389350 52389351 A ACT 18 INTERGENIC homozygous 58684621 3 52389451 52389452 T G 22 INTERGENIC homozygous 58684622 3 52389460 52389461 T C 24 INTERGENIC homozygous 58684623 3 52389499 52389500 C T 23 INTERGENIC homozygous 58684624 3 52389551 52389552 G C 33 INTERGENIC homozygous 58684625 3 52389556 52389557 A G 32 INTERGENIC homozygous 58684626 3 52389900 52389901 T C 26 INTERGENIC homozygous 58684627 3 52389984 52389985 C T 16 INTERGENIC homozygous 58684628 3 52390289 52390290 C T 22 INTERGENIC homozygous 58684629 3 52390364 52390365 A C 23 INTERGENIC homozygous 58684630 3 52390604 52390605 G C 14 INTERGENIC homozygous 58684631 3 52390702 52390703 C CT 24 INTERGENIC homozygous 57375981 3 52390733 52390734 G C 23 INTERGENIC homozygous 57375982 3 52390758 52390759 A - 23 INTERGENIC homozygous 57375983 3 52390768 52390769 G C 24 INTERGENIC homozygous 57375984 3 52390774 52390775 A - 22 INTERGENIC homozygous 57375985 3 52390786 52390787 G - 24 INTERGENIC homozygous 57375986 3 52390790 52390791 A - 24 INTERGENIC homozygous 57375987 3 52390924 52390925 A T 23 INTERGENIC possibly homozygous 58684632 3 52391232 52391233 A ATACTTCTGGTAG 20 INTERGENIC homozygous 58684633 3 52391261 52391304 CACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT ------------------------------------------- 23 INTERGENIC homozygous 58684634 3 52391666 52391667 C T 11 INTERGENIC homozygous 58684635 3 52391718 52391719 T C 14 INTERGENIC homozygous 58684636 3 52391932 52391933 G C 15 INTERGENIC homozygous 58684637 3 52392083 52392084 C T 12 INTERGENIC homozygous 58684638 3 52392121 52392122 A G 15 INTERGENIC homozygous 58684639 3 52392192 52392193 G A 17 INTERGENIC homozygous 58684640 3 52392357 52392358 C T 16 INTERGENIC homozygous 58684641 3 52392631 52392632 G T 18 INTERGENIC homozygous 58684642 3 52392655 52392656 G A 20 INTERGENIC homozygous 58684643 3 52392673 52392674 T A 19 INTERGENIC homozygous 58684644 3 52392872 52392873 A - 13 INTERGENIC homozygous 58684645 3 52393037 52393038 G A 13 INTERGENIC homozygous 58684646 3 52393433 52393434 C T 17 INTERGENIC homozygous 58684647 3 52394689 52394690 A C 17 INTERGENIC homozygous 58684648 3 52394770 52394771 C T 20 INTERGENIC homozygous 58684649 3 52394843 52394844 C T 25 INTERGENIC homozygous 58684650 3 52394949 52394950 C - 16 INTERGENIC homozygous 58684651 3 52394954 52394955 C A 16 INTERGENIC homozygous 58684652 3 52395057 52395058 C T 5 INTERGENIC homozygous 57375988 3 52395060 52395061 T - 4 INTERGENIC homozygous 58684653 3 52395254 52395255 A G 18 INTERGENIC homozygous 58684654 3 52395333 52395334 T A 28 INTERGENIC homozygous 58684655 3 52395848 52395849 T A 24 INTERGENIC homozygous 58684656 3 52396111 52396112 C CT 19 INTERGENIC homozygous 58684657 3 52396480 52396481 A G 18 INTERGENIC homozygous 58684658 3 52396503 52396504 C CAAAACCCATGGGAGGA 20 INTERGENIC homozygous 58684659 3 52396602 52396603 G A 16 INTERGENIC homozygous 58684660 3 52396699 52396700 C G 18 INTERGENIC homozygous 58684661 3 52396965 52396966 T G 16 INTERGENIC homozygous 58684662 3 52397142 52397143 A ATGTT 17 INTERGENIC homozygous 58684663 3 52397227 52397228 T G 9 INTERGENIC homozygous 58684664 3 52397539 52397540 A G 17 INTERGENIC homozygous 58684665 3 52397760 52397761 C - 19 INTERGENIC homozygous 58684666 3 52397783 52397784 C T 21 INTERGENIC homozygous 58684667 3 52397837 52397838 T TA 16 INTERGENIC homozygous 58684668 3 52398234 52398235 G GA 18 INTERGENIC homozygous 58684669 3 52398916 52398917 A C 16 INTERGENIC homozygous 58684670 3 52398952 52398953 A C 16 INTERGENIC homozygous 58684671 3 52399085 52399086 G A 18 INTERGENIC homozygous 58684672 3 52399117 52399118 C CATGT 15 INTERGENIC homozygous 58684673 3 52399808 52399809 T C 31 INTERGENIC homozygous 58684674 3 52400247 52400248 C G 16 INTERGENIC homozygous 58684675 3 52400310 52400316 TGTGTG ------ 14 INTERGENIC homozygous 58684676 3 52400320 52400321 T C 12 INTERGENIC homozygous 58684677 3 52400322 52400323 T C 13 INTERGENIC homozygous 58684678 3 52400324 52400325 T C 13 INTERGENIC homozygous 58684679 3 52400326 52400327 T C 12 INTERGENIC homozygous 58684680 3 52400328 52400329 T C 12 INTERGENIC homozygous 58684681 3 52400330 52400331 T C 12 INTERGENIC homozygous 58684682 3 52400847 52400848 A G 33 INTERGENIC homozygous 58684683 3 52400962 52400963 G T 32 INTERGENIC homozygous 58684684 3 52401529 52401530 G GCA 5 INTERGENIC homozygous 58684685 3 52401540 52401542 CA -- 5 INTERGENIC homozygous 58684686 3 52401546 52401548 CA -- 14 INTERGENIC homozygous 58684687 3 52401551 52401552 G GTT 4 INTERGENIC homozygous 58684688 3 52401562 52401563 T TGTGTGTGTGTGTGTGTGTGTGTGTGTGC 13 INTERGENIC homozygous 58684689 3 52401942 52401943 T C 15 INTERGENIC homozygous 58684690 3 52402135 52402136 A G 25 INTERGENIC homozygous 58684691 3 52402166 52402167 G A 23 INTERGENIC homozygous 58684692 3 52402178 52402179 G T 23 INTERGENIC homozygous 58684693 3 52402234 52402235 C A 24 INTERGENIC homozygous 58684694 3 52402241 52402242 A G 25 INTERGENIC homozygous 58684695 3 52402267 52402268 A G 26 INTERGENIC homozygous 58684696 3 52402268 52402269 G A 26 INTERGENIC homozygous 58684697 3 52402282 52402283 T C 25 INTERGENIC homozygous 58684698 3 52402284 52402285 C T 25 INTERGENIC homozygous 58684699 3 52402290 52402291 A C 25 INTERGENIC homozygous 58684700 3 52402319 52402320 A T 24 INTERGENIC homozygous 58684701 3 52402396 52402397 A G 22 INTERGENIC homozygous 58684702 3 52403047 52403048 T C 31 INTERGENIC homozygous 58684703 3 52403138 52403139 G A 18 INTERGENIC homozygous 58684704 3 52403330 52403331 C - 21 INTERGENIC homozygous 58684705 3 52404075 52404079 ACAC ---- 12 INTERGENIC heterozygous 58684706 3 52405259 52405260 T G 10 INTERGENIC homozygous 58684707 3 52405535 52405536 A C 17 INTERGENIC homozygous 58684708 3 52405716 52405717 C T 37 INTERGENIC homozygous 58684709 3 52406150 52406151 T TGTTCTCTCAAAAACCTACCAGTCCTATAGATTTTTTTGCCAATGGTAATTTCCTAGATAAAGCACAGCACACAATTTA 32 INTERGENIC homozygous 58684710 3 52406161 52406162 T C 34 INTERGENIC homozygous 58684711 3 52406216 52406217 G C 19 INTERGENIC homozygous 58684712 3 52406217 52406218 T C 19 INTERGENIC homozygous 58684713 3 52406219 52406222 AAG --- 21 INTERGENIC homozygous 58684714 3 52406226 52406241 CTTAATAATAGATAG --------------- 21 INTERGENIC homozygous 58684715 3 52406963 52406964 T C 20 INTERGENIC homozygous 58684716 3 52407120 52407121 G C 17 INTERGENIC homozygous 58684717 3 52407413 52407414 A G 25 INTERGENIC homozygous 58684718 3 52409414 52409415 G A 30 INTERGENIC homozygous 58684719 3 52411730 52411731 T TCTCTCTC 22 INTERGENIC heterozygous 58684720 3 52412204 52412218 ACACACACACACAC -------------- 12 INTERGENIC homozygous 58684721 3 52421724 52421725 A G 25 INTERGENIC homozygous 58684722 3 52423564 52423565 A AGACAGAGAGAGAGAG 7 INTERGENIC homozygous 58684723 3 52423598 52423599 A AAGG 2 INTERGENIC homozygous 58684724 3 52423645 52423649 AGAT ---- 3 INTERGENIC homozygous 58684725 3 52424400 52424401 T G 20 INTERGENIC homozygous 58684726 3 52434470 52434471 C A 22 GENIC homozygous 58684727 3 52435389 52435390 T G 27 GENIC homozygous 58684728 3 52437361 52437362 C A 35 GENIC homozygous 58684729 3 52437798 52437799 C - 26 GENIC homozygous 58582899 3 52438463 52438464 G GA 10 GENIC homozygous 58684730 3 52442296 52442297 A C 28 GENIC homozygous 58684731 3 52442479 52442480 G A 27 GENIC homozygous 58684732 3 52443743 52443744 G GTTTT 11 GENIC heterozygous 58684733 3 52443743 52443744 G GT 11 GENIC possibly homozygous 58582901 3 52445146 52445147 G A 24 GENIC homozygous 58684734 3 52445167 52445168 T G 30 GENIC homozygous 58684735 3 52445515 52445516 G A 33 GENIC homozygous 58684736 3 52446023 52446024 C T 25 GENIC homozygous 58684737 3 52446122 52446123 G A 35 GENIC homozygous 58684738 3 52447033 52447034 T TA 14 INTERGENIC homozygous 58684739 3 52447302 52447303 T A 23 INTERGENIC homozygous 58684740 3 52448373 52448374 A G 27 INTERGENIC homozygous 58684741 3 52448736 52448737 C A 28 INTERGENIC homozygous 58684742 3 52448905 52448906 C - 19 INTERGENIC homozygous 57375992 3 52448912 52448913 C - 19 INTERGENIC homozygous 57375993 3 52449601 52449602 G T 31 INTERGENIC homozygous 58684743 3 52449656 52449657 C A 37 INTERGENIC homozygous 58684744 3 52450152 52450153 A G 22 INTERGENIC homozygous 58684745 3 52450289 52450290 A AAG 17 INTERGENIC homozygous 58684746 3 52450990 52450991 A G 21 INTERGENIC homozygous 58684747 3 52451040 52451041 G A 25 INTERGENIC homozygous 58684748 3 52452531 52452532 T TTTTGTTTG 25 INTERGENIC homozygous 58684749 3 52452655 52452656 A G 38 INTERGENIC homozygous 58684750 3 52453389 52453390 G A 19 INTERGENIC possibly homozygous 58684751 3 52453596 52453597 G T 25 INTERGENIC homozygous 58684752 3 52454173 52454174 A C 45 INTERGENIC homozygous 58684753 3 52454480 52454481 A C 31 INTERGENIC homozygous 58684754 3 52455694 52455696 AC -- 12 INTERGENIC possibly homozygous 58582902 3 52456313 52456314 T TC 36 INTERGENIC homozygous 58684755 3 52456441 52456442 C G 28 INTERGENIC homozygous 58684756 3 52456637 52456654 ACACACACACACACACA ----------------- 19 INTERGENIC homozygous 58684757 3 52456656 52456657 C T 22 INTERGENIC homozygous 58684758 3 52456662 52456663 C T 21 INTERGENIC homozygous 58684759 3 52456984 52456985 G A 16 INTERGENIC homozygous 57375994 3 52457196 52457197 A G 23 INTERGENIC homozygous 58684760 3 52457217 52457218 C T 17 INTERGENIC homozygous 58684761 3 52459995 52459996 T C 15 INTERGENIC homozygous 58684768 3 52457927 52457929 TT -- 26 INTERGENIC homozygous 58684762 3 52458377 52458378 G GA 29 INTERGENIC homozygous 58684763 3 52458708 52458709 G A 35 INTERGENIC homozygous 58684764 3 52458931 52458932 A G 31 INTERGENIC homozygous 58684765 3 52459920 52459921 C CTTT 9 INTERGENIC homozygous 58684766 3 52459935 52459939 TTTT ---- 8 INTERGENIC homozygous 58684767 3 52460284 52460285 C T 27 INTERGENIC homozygous 58684769 3 52460597 52460598 C T 40 INTERGENIC homozygous 58684770 3 52460925 52460926 C T 20 INTERGENIC homozygous 58684771 3 52461044 52461045 C T 22 INTERGENIC homozygous 58684772 3 52461206 52461207 G A 29 INTERGENIC homozygous 58684773 3 52461243 52461244 A G 32 INTERGENIC homozygous 58684774 3 52461316 52461320 AGGC ---- 18 INTERGENIC homozygous 58684775 3 52462625 52462626 A G 23 INTERGENIC homozygous 57375995 3 52463732 52463734 TG -- 2 INTERGENIC homozygous 58684776 3 52463758 52463776 TCTCTCTCTCTCTGTGTG ------------------ 6 INTERGENIC heterozygous 58684777 3 52464110 52464114 AGAC ---- 18 INTERGENIC possibly homozygous 58684778 3 52464118 52464120 AC -- 18 INTERGENIC possibly homozygous 58684779 3 52466086 52466087 A G 23 INTERGENIC homozygous 58684780 3 52466763 52466764 T TACAC 6 INTERGENIC homozygous 58684781 3 52467611 52467612 C CT 11 INTERGENIC homozygous 58684782 3 52468018 52468019 A AATAT 1 INTERGENIC homozygous 58684783 3 52469196 52469197 G A 25 INTERGENIC homozygous 58684784 3 52472569 52472570 A T 41 INTERGENIC homozygous 58684785 3 52473102 52473103 C CAT 11 INTERGENIC homozygous 58684786 3 52473909 52473910 G C 24 INTERGENIC homozygous 58684787 3 52474502 52474503 G A 31 INTERGENIC homozygous 58684788 3 52475108 52475109 A AATGG 15 INTERGENIC homozygous 58684789 3 52475165 52475166 G GTGGA 17 INTERGENIC heterozygous 58684790 3 52475165 52475166 G GTGGATGGA 17 INTERGENIC possibly homozygous 58684791 3 52475713 52475714 C T 35 INTERGENIC homozygous 58684792 3 52475900 52475901 A C 48 INTERGENIC homozygous 58684793 3 52476250 52476260 ACACACACAT ---------- 43 INTERGENIC homozygous 58684797 3 52475901 52475902 C A 48 INTERGENIC homozygous 58684794 3 52476121 52476137 CACACACACACACACA ---------------- 18 INTERGENIC homozygous 58684795 3 52476177 52476179 CG -- 32 INTERGENIC homozygous 58684796 3 52476399 52476400 T TAC 41 INTERGENIC homozygous 58684798 3 52476445 52476447 CT -- 32 INTERGENIC possibly homozygous 58684799 3 52476450 52476457 ACACACA ------- 29 INTERGENIC possibly homozygous 58684800 3 52476458 52476483 ACACACACATTCACACACACATTCA ------------------------- 38 INTERGENIC possibly homozygous 58684801 3 52476579 52476580 C T 23 INTERGENIC homozygous 58684802 3 52476932 52476933 T C 20 INTERGENIC homozygous 58684803 3 52477609 52477610 C CA 12 INTERGENIC homozygous 58684804 3 52478009 52478010 T - 22 INTERGENIC homozygous 58684805 3 52478941 52478942 C CA 17 INTERGENIC homozygous 57375999 3 52482906 52482907 C T 20 GENIC homozygous 58684806 3 52483669 52483670 T C 32 GENIC homozygous 58684807 3 52484392 52484393 A - 26 GENIC homozygous 58684808 3 52484966 52484970 AAAC ---- 15 GENIC homozygous 58684809 3 52485239 52485240 T TTCTC 16 GENIC possibly homozygous 58544605 3 52486160 52486161 T - 10 GENIC homozygous 58684812 3 52484978 52484979 A C 18 GENIC homozygous 58684810 3 52485982 52485983 T C 33 GENIC homozygous 58684811 3 52486171 52486172 T A 13 GENIC homozygous 58684813 3 52486756 52486757 C T 34 GENIC homozygous 58684814 3 52487072 52487073 G GTTT 14 GENIC homozygous 58684815 3 52487876 52487877 A G 14 GENIC homozygous 58684816 3 52488034 52488035 C A 9 GENIC homozygous 58684817 3 52488314 52488315 T A 24 GENIC homozygous 58684818 3 52489037 52489049 GAGTATGTGTGA ------------ 13 GENIC heterozygous 58582904 3 52489498 52489499 T G 28 GENIC homozygous 58684819 3 52491232 52491345 AGAACTGTTAACTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCT ----------------------------------------------------------------------------------------------------------------- 11 GENIC homozygous 58684820 3 52492335 52492336 G GGTGT 5 GENIC homozygous 58684821 3 52492388 52492389 A G 12 GENIC homozygous 58684822 3 52492422 52492430 GTGTGTGT -------- 6 GENIC homozygous 58684823 3 52493033 52493035 TT -- 28 GENIC homozygous 58544606 3 52493035 52493036 T A 28 GENIC homozygous 58544607 3 52493038 52493039 G GAGTAT 30 GENIC homozygous 58544608 3 52493103 52493108 ATTTT ----- 26 GENIC homozygous 57376006 3 52493109 52493110 A G 24 GENIC homozygous 58582905 3 52493112 52493113 G GGAAA 24 GENIC homozygous 57376007 3 52493172 52493173 A AT 32 GENIC homozygous 57376008 3 52493191 52493192 G GT 30 GENIC homozygous 57376009 3 52493278 52493279 C A 23 GENIC homozygous 57376010 3 52493282 52493283 C T 25 GENIC homozygous 57376011 3 52493302 52493303 C A 30 GENIC homozygous 57376012 3 52493314 52493315 C A 29 GENIC homozygous 57376013 3 52493662 52493663 A - 24 GENIC homozygous 58667452 3 52493711 52493712 C T 40 GENIC homozygous 58684824 3 52493839 52493840 G A 27 GENIC homozygous 58684825 3 52493931 52493932 G A 21 GENIC homozygous 58684826 3 52493957 52493958 C CA 10 GENIC possibly homozygous 58648974 3 52494174 52494175 T C 24 GENIC homozygous 58684827 3 52494640 52494641 A G 29 GENIC homozygous 58684828 3 52495235 52495236 T C 20 GENIC homozygous 58667453 3 52495814 52495815 C CTGTT 31 GENIC possibly homozygous 58684829 3 52495839 52495840 G GGTT 34 GENIC homozygous 58684830 3 52496247 52496248 G A 26 GENIC homozygous 58684831 3 52496718 52496719 T - 15 GENIC heterozygous 58684832 3 52497184 52497185 G A 20 GENIC homozygous 58353842 3 52499363 52499364 C T 29 GENIC homozygous 58353844 3 52500666 52500667 G A 9 GENIC homozygous 58353846 3 52501280 52501281 G GACAC 19 GENIC heterozygous 58684833 3 52501281 52501295 ACACACACACACAC -------------- 19 GENIC possibly homozygous 58684834 3 52501537 52501538 A - 14 GENIC heterozygous 57376014 3 52504800 52504801 T TAG 6 GENIC homozygous 58684835 3 52504806 52504807 G GAC 10 GENIC homozygous 58667454 3 52504888 52504889 A G 23 GENIC homozygous 58353850 3 52505105 52505106 T G 29 GENIC homozygous 58353852 3 52507572 52507575 TTT --- 28 GENIC homozygous 57376016 3 52509680 52509688 AAGGAAGA -------- 13 GENIC homozygous 58684836 3 52513706 52513707 C CA 15 GENIC homozygous 57376017 3 52514045 52514055 GTGTGTGTGT ---------- 8 GENIC homozygous 58684837 3 52518932 52518933 T C 28 GENIC homozygous 58353858 3 52518942 52518943 T A 30 GENIC homozygous 58353860 3 52519012 52519013 G A 34 GENIC homozygous 58353862 3 52519093 52519094 C A 28 GENIC homozygous 58353864 3 52519277 52519278 C T 27 GENIC homozygous 58353866 3 52520559 52520560 C CAG 9 GENIC homozygous 57376020 3 52522054 52522055 T G 30 GENIC homozygous 58353868 3 52522181 52522182 C T 29 GENIC homozygous 58353870 3 52522830 52522831 C T 33 GENIC homozygous 58353872 3 52522865 52522866 A G 35 GENIC homozygous 58353874 3 52523805 52523806 A G 19 GENIC homozygous 58353876 3 52523912 52523913 A G 16 GENIC homozygous 58353878 3 52524326 52524327 C A 19 GENIC homozygous 58353880 3 52525472 52525473 A C 40 GENIC homozygous 58353882 3 52528892 52528908 TGTGTGTGTGTGTGTG ---------------- 26 GENIC homozygous 58684838 3 52528931 52528932 G A 23 GENIC homozygous 58684839 3 52530347 52530348 C CA 16 GENIC homozygous 57376023 3 52530391 52530392 C CA 14 GENIC homozygous 58353886 3 52530466 52530468 TG -- 6 GENIC homozygous 58582908 3 52531247 52531248 G A 31 GENIC homozygous 58353888 3 52531996 52531997 C T 35 GENIC homozygous 58353890 3 52532836 52532837 G A 28 GENIC homozygous 58353892 3 52533029 52533030 T A 24 GENIC homozygous 58353894