chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 54112003 54112004 C T 39 GENIC homozygous 58356701 3 54112194 54112195 A ATGTG 26 GENIC homozygous 58356703 3 54112213 54112214 G GA 38 GENIC heterozygous 58356705 3 54112228 54112229 T - 36 GENIC heterozygous 58356707 3 54112233 54112234 A G 37 GENIC heterozygous 58356709 3 54112237 54112238 A G 38 GENIC heterozygous 58356711 3 54112489 54112490 C G 66 GENIC homozygous 58356713 3 54112770 54112771 C A 46 GENIC possibly homozygous 58356715 3 54113223 54113224 C T 50 GENIC homozygous 58356717 3 54114182 54114183 A G 39 GENIC possibly homozygous 58356719 3 54114489 54114490 T C 33 GENIC homozygous 58356721 3 54115901 54115902 T TTTCC 9 GENIC homozygous 58356723 3 54115924 54115925 T C 17 GENIC heterozygous 58356725 3 54116855 54116856 T TG 8 GENIC homozygous 58356728 3 54116882 54116883 G - 8 GENIC heterozygous 58356730 3 54116884 54116901 GTGTGTGTGTGTGTGTG ----------------- 10 GENIC heterozygous 58356732 3 54116976 54116977 A G 26 GENIC homozygous 58356734 3 54117308 54117309 G T 42 GENIC homozygous 58356736 3 54118977 54118978 T TTATC 55 GENIC homozygous 58356738 3 54119153 54119154 G GT 28 GENIC homozygous 58356740 3 54119196 54119197 C CTT 28 GENIC homozygous 58356742 3 54120194 54120195 A G 35 GENIC possibly homozygous 58356744 3 54120285 54120286 G T 41 GENIC homozygous 58356746 3 54121507 54121508 T C 36 GENIC possibly homozygous 58356748 3 54122961 54122962 C T 19 GENIC homozygous 58356750 3 54123224 54123225 C T 44 GENIC homozygous 58356752 3 54123307 54123308 C T 38 GENIC homozygous 58356754 3 54123440 54123442 AA -- 42 GENIC homozygous 58356756 3 54123628 54123629 G A 40 GENIC homozygous 58356758 3 54124009 54124010 C CATG 58 GENIC homozygous 58356760 3 54124292 54124293 C - 35 GENIC homozygous 58356762 3 54124477 54124478 C A 52 GENIC possibly homozygous 58356764 3 54124938 54124939 C T 40 GENIC homozygous 58356766 3 54125139 54125140 T C 29 GENIC homozygous 58356768 3 54125200 54125201 A G 45 GENIC possibly homozygous 58356770 3 54125376 54125377 A AT 49 GENIC homozygous 58356772 3 54125426 54125427 C T 46 GENIC homozygous 58356774 3 54125493 54125494 A G 50 GENIC homozygous 58356776 3 54127705 54127706 C G 35 GENIC homozygous 58356778 3 54127824 54127825 G GT 13 GENIC homozygous 58356780 3 54127855 54127856 T C 21 GENIC homozygous 58356782 3 54128076 54128077 C T 48 GENIC homozygous 58356784 3 54128210 54128212 TT -- 39 GENIC homozygous 58356786 3 54128440 54128441 A C 30 GENIC homozygous 58356788 3 54128466 54128467 T C 40 GENIC homozygous 58356790 3 54128752 54128753 A G 29 GENIC possibly homozygous 58356792 3 54128786 54128787 G GA 29 GENIC heterozygous 58356794 3 54128810 54128811 G GA 26 GENIC heterozygous 58356796 3 54128811 54128812 A G 26 GENIC heterozygous 58356798 3 54128815 54128816 G A 26 GENIC heterozygous 58356800 3 54128825 54128826 C A 23 GENIC possibly homozygous 58356802 3 54128933 54128934 G A 33 GENIC possibly homozygous 58356804 3 54129068 54129069 A G 16 GENIC heterozygous 58356806 3 54129705 54129706 C T 34 GENIC homozygous 58356808 3 54129820 54129821 C T 68 GENIC homozygous 58356810 3 54130000 54130001 G A 42 GENIC homozygous 58356812 3 54130082 54130085 TTA --- 44 GENIC homozygous 58356814 3 54130710 54130711 G C 36 GENIC homozygous 58356816 3 54130748 54130749 G GC 36 GENIC homozygous 58356818 3 54130782 54130783 A T 46 GENIC homozygous 58356820 3 54130791 54130792 A G 47 GENIC homozygous 58356822 3 54131568 54131569 A G 52 GENIC homozygous 58356824 3 54131914 54131915 C G 38 GENIC homozygous 58356826 3 54132202 54132203 T C 38 GENIC homozygous 58356828 3 54132530 54132531 T A 59 GENIC homozygous 58356830 3 54132696 54132697 G T 60 GENIC possibly homozygous 58356832 3 54132955 54132956 T C 36 GENIC possibly homozygous 58356834 3 54133660 54133661 T G 21 GENIC heterozygous 58356836 3 54133785 54133786 A G 30 GENIC heterozygous 58356838 3 54135249 54135250 T G 46 GENIC homozygous 58356840 3 54136099 54136100 G GT 48 GENIC possibly homozygous 58356842 3 54136248 54136249 C A 54 GENIC homozygous 58356844 3 54136271 54136272 C CCA 47 GENIC homozygous 58356846 3 54139524 54139525 G T 35 GENIC homozygous 58356856 3 54136691 54136692 A C 51 GENIC homozygous 58356848 3 54137808 54137809 T C 35 GENIC homozygous 58356850 3 54138457 54138458 G A 61 GENIC homozygous 58356852 3 54138762 54138763 C CT 47 GENIC homozygous 58356854 3 54127501 54127502 T - 8 GENIC homozygous 57376824 3 54133901 54133902 T C 45 GENIC heterozygous 57376825 3 54133944 54133945 A T 55 GENIC heterozygous 57376826 3 54133973 54133974 C T 54 GENIC heterozygous 57376827 3 54133537 54133538 T - 22 GENIC possibly homozygous 57888411 3 54140095 54140097 TC -- 70 GENIC homozygous 58356858 3 54140507 54140508 T TA 26 GENIC homozygous 57376828 3 54140828 54140829 C A 47 GENIC homozygous 57376829 3 54140833 54140834 T A 45 GENIC homozygous 58356860 3 54140852 54140853 A AT 38 GENIC homozygous 57376830 3 54140862 54140863 C - 40 GENIC homozygous 57376831 3 54140962 54140963 A - 31 GENIC homozygous 57376832 3 54142138 54142139 T C 31 GENIC homozygous 58356862 3 54142202 54142203 A G 20 GENIC homozygous 58356864 3 54142828 54142829 G A 58 GENIC homozygous 58291030 3 54142964 54142973 ATCATCATC --------- 13 GENIC homozygous 58356866 3 54143459 54143460 A G 30 GENIC homozygous 58356868 3 54143650 54143651 T C 35 GENIC possibly homozygous 58356870 3 54144861 54144862 C T 25 GENIC homozygous 58356872 3 54145031 54145032 C T 3 GENIC homozygous 58356874 3 54145575 54145576 A G 57 GENIC homozygous 58356876 3 54146007 54146008 A C 37 GENIC homozygous 58356878 3 54146475 54146477 AT -- 53 GENIC homozygous 58356880 3 54150154 54150155 C T 38 GENIC homozygous 58356882 3 54150661 54150662 G - 39 GENIC homozygous 58356884 3 54152088 54152089 C T 43 GENIC homozygous 58356886 3 54152323 54152324 A AT 49 GENIC homozygous 58356888 3 54152593 54152594 T C 47 GENIC homozygous 58356890 3 54153038 54153039 T G 33 GENIC homozygous 58356892 3 54153501 54153502 G A 20 GENIC homozygous 58356894 3 54153545 54153546 G GGGGGTT 6 GENIC heterozygous 57376833 3 54153860 54153861 T A 49 GENIC possibly homozygous 58356896 3 54153956 54153957 C T 41 GENIC homozygous 58356898 3 54154121 54154122 T C 27 GENIC homozygous 58356900 3 54154185 54154186 G A 42 GENIC homozygous 58356902 3 54154893 54154894 A T 42 GENIC homozygous 58356904 3 54154896 54154897 C T 41 GENIC homozygous 58356906 3 54154921 54154922 C G 38 GENIC homozygous 58356908 3 54155072 54155073 T C 29 GENIC possibly homozygous 58356910 3 54155182 54155183 C A 29 GENIC homozygous 58356912 3 54155284 54155285 G A 41 GENIC homozygous 58356914 3 54155384 54155385 G A 43 GENIC homozygous 58356916 3 54156472 54156473 G C 37 GENIC homozygous 58356918 3 54156583 54156584 A G 44 GENIC homozygous 58356920 3 54156642 54156643 A C 37 GENIC homozygous 58356922 3 54158558 54158559 C T 46 GENIC homozygous 58356924 3 54159035 54159036 G GTTT 15 GENIC homozygous 58356926 3 54159048 54159049 T TAAAAAAAAAAA 4 GENIC heterozygous 58356928 3 54159048 54159049 T TAAAAAAAAA 4 GENIC heterozygous 58356930 3 54159319 54159320 T A 36 GENIC homozygous 58356932 3 54159575 54159576 A AGT 29 GENIC homozygous 58356934 3 54159580 54159581 G C 29 GENIC homozygous 58356936 3 54159623 54159624 T - 18 GENIC possibly homozygous 58291032 3 54159794 54159795 A G 58 GENIC homozygous 58356938 3 54159926 54159927 G A 40 GENIC homozygous 58356940 3 54160070 54160071 C - 34 GENIC homozygous 58356942 3 54160092 54160093 T - 33 GENIC homozygous 58356944 3 54160179 54160180 C T 19 GENIC homozygous 58356946 3 54160272 54160273 A T 32 GENIC homozygous 58356948 3 54160665 54160666 C T 49 GENIC possibly homozygous 58356950 3 54161100 54161101 T - 30 GENIC homozygous 58356952 3 54161286 54161287 T C 55 GENIC possibly homozygous 58356954 3 54161581 54161582 C T 36 GENIC homozygous 58356956 3 54161766 54161767 A T 55 GENIC possibly homozygous 58356958 3 54161818 54161819 T A 61 GENIC homozygous 58356960 3 54162069 54162070 G A 28 GENIC possibly homozygous 58356962 3 54162158 54162159 C T 44 GENIC homozygous 58356964 3 54162315 54162316 C A 38 GENIC heterozygous 58356966 3 54162320 54162321 G A 39 GENIC heterozygous 58356968 3 54162345 54162346 C A 39 GENIC heterozygous 58356970 3 54162486 54162487 G A 38 GENIC possibly homozygous 58356972 3 54162648 54162649 A G 72 GENIC possibly homozygous 58356974 3 54162774 54162775 T TTTTG 32 GENIC homozygous 58356976 3 54162779 54162780 T G 44 GENIC heterozygous 58356978 3 54162779 54162780 T TTTGTTTGG 41 GENIC homozygous 58356980 3 54162783 54162784 G T 43 GENIC heterozygous 58356982 3 54162832 54162833 T C 41 GENIC homozygous 58356984 3 54162919 54162920 C A 27 GENIC homozygous 58356986 3 54162968 54162969 A T 24 GENIC heterozygous 58356988 3 54163257 54163258 A T 45 GENIC homozygous 58356990 3 54163832 54163833 T G 42 GENIC homozygous 58356992 3 54164370 54164371 C T 34 GENIC homozygous 58356994 3 54164959 54164960 C T 51 GENIC homozygous 58356996 3 54164998 54164999 T C 39 GENIC homozygous 58356998 3 54165070 54165071 C T 15 GENIC homozygous 58357000 3 54165206 54165207 A T 24 GENIC homozygous 58357002 3 54165464 54165465 C G 45 GENIC homozygous 58357004 3 54165506 54165507 G T 44 GENIC homozygous 58357006 3 54165664 54165665 T A 41 GENIC homozygous 58357009 3 54165707 54165708 T G 42 GENIC homozygous 58357011 3 54165958 54165959 A C 33 GENIC homozygous 58357013 3 54165994 54165995 G T 36 GENIC homozygous 58357015 3 54166090 54166091 C T 32 GENIC homozygous 58357017 3 54166132 54166133 C T 31 GENIC homozygous 58357019 3 54166401 54166402 A G 45 GENIC homozygous 58357021 3 54166589 54166590 T C 37 GENIC homozygous 58357023 3 54166696 54166697 T C 45 GENIC homozygous 58357025 3 54167213 54167214 G A 46 GENIC homozygous 58357027 3 54167542 54167543 T C 45 GENIC homozygous 58357029 3 54167549 54167550 A C 47 GENIC possibly homozygous 58357031 3 54169354 54169355 C A 38 GENIC homozygous 58357033 3 54169453 54169454 C T 52 GENIC homozygous 58357035 3 54169563 54169564 G A 53 GENIC possibly homozygous 58357037 3 54169683 54169684 G T 55 GENIC homozygous 58357039 3 54169898 54169899 C T 53 GENIC homozygous 58357041 3 54169979 54169980 G GA 48 GENIC homozygous 58357043 3 54170484 54170485 A G 35 GENIC homozygous 58357045 3 54170575 54170576 A T 39 GENIC homozygous 58357047 3 54170628 54170629 A G 44 GENIC possibly homozygous 58357049 3 54170844 54170845 A G 56 GENIC homozygous 58357051 3 54172311 54172312 T G 48 GENIC homozygous 58357053 3 54172427 54172428 A C 16 GENIC possibly homozygous 58357055 3 54172434 54172435 A T 14 GENIC possibly homozygous 58357057 3 54172457 54172458 T G 10 GENIC heterozygous 58357059 3 54172544 54172545 G C 15 GENIC heterozygous 58357061 3 54172584 54172585 G - 4 GENIC heterozygous 57376834 3 54173233 54173234 A G 14 GENIC heterozygous 58357063 3 54173266 54173267 C T 17 GENIC heterozygous 58357065 3 54173269 54173270 G A 18 GENIC heterozygous 58357067 3 54173327 54173328 T C 39 GENIC homozygous 58357069 3 54173401 54173402 T C 58 GENIC homozygous 58357071 3 54173446 54173447 C A 63 GENIC homozygous 58357073 3 54173662 54173663 T C 49 GENIC homozygous 58357075 3 54173713 54173714 T C 53 GENIC homozygous 58357077 3 54173745 54173746 G C 46 GENIC homozygous 58357079 3 54174246 54174247 C CG 34 GENIC homozygous 58357081 3 54175738 54175739 G A 60 GENIC homozygous 58357091 3 54174292 54174293 G A 47 GENIC homozygous 58357083 3 54174668 54174669 A G 44 GENIC homozygous 58357085 3 54175431 54175432 G A 43 GENIC homozygous 58357087 3 54175691 54175692 G A 58 GENIC homozygous 58357089 3 54168975 54168979 TGTT ---- 31 GENIC homozygous 58132707 3 54175834 54175835 T TA 31 GENIC homozygous 58357093 3 54175878 54175879 G C 34 GENIC heterozygous 58357095 3 54175882 54175883 G T 35 GENIC heterozygous 58357097 3 54176049 54176050 C G 38 GENIC heterozygous 58357099 3 54176369 54176370 G T 38 GENIC homozygous 58357101 3 54176538 54176539 A G 34 GENIC homozygous 58357103 3 54176590 54176591 G A 45 GENIC homozygous 58357105 3 54176684 54176685 G C 51 GENIC homozygous 58357107 3 54176892 54176893 T A 24 GENIC homozygous 58357109 3 54176975 54176976 A G 23 GENIC homozygous 58357111 3 54177200 54177201 G A 36 GENIC homozygous 58357113 3 54177326 54177327 A G 40 GENIC homozygous 58357115 3 54177417 54177418 T G 32 GENIC homozygous 58357117 3 54177535 54177536 T - 47 GENIC homozygous 58357119 3 54178037 54178038 G C 57 GENIC homozygous 57376835 3 54178134 54178135 T A 65 GENIC possibly homozygous 58357121 3 54178449 54178450 G GT 35 GENIC homozygous 58357123 3 54178462 54178463 G A 43 GENIC homozygous 58357125 3 54178527 54178528 T C 61 GENIC homozygous 58357127 3 54179447 54179448 T - 32 GENIC homozygous 57376836 3 54179568 54179569 A C 34 GENIC homozygous 58357129 3 54179870 54179871 G A 38 GENIC homozygous 58357131 3 54179889 54179890 T C 46 GENIC homozygous 58357133 3 54180679 54180680 A G 47 GENIC homozygous 58357135 3 54181208 54181209 C CGG 3 GENIC heterozygous 58357137 3 54181427 54181428 T C 44 GENIC homozygous 58357139 3 54181468 54181469 G A 42 GENIC homozygous 58357141 3 54181515 54181516 A G 41 GENIC homozygous 58357143 3 54181538 54181539 G T 37 GENIC homozygous 58357145 3 54182262 54182263 A G 27 GENIC homozygous 58357147 3 54183120 54183121 C T 44 GENIC possibly homozygous 57376837 3 54186916 54186918 AT -- 22 GENIC homozygous 58357149 3 54186957 54186960 TAT --- 28 GENIC homozygous 58357151