chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 116588859 116588860 A G 48 GENIC homozygous 57617393 3 116589965 116589966 C - 42 GENIC homozygous 57617395 3 116590240 116590243 AAA --- 37 GENIC homozygous 57617397 3 116591559 116591560 C T 63 GENIC homozygous 58008111 3 116592198 116592199 G A 63 GENIC homozygous 57617399 3 116593527 116593528 C G 72 GENIC homozygous 57617401 3 116593845 116593847 AA -- 54 GENIC homozygous 57617403 3 116594897 116594898 A G 51 GENIC homozygous 57617405 3 116595275 116595276 T C 50 GENIC homozygous 58008114 3 116595303 116595304 T G 52 GENIC homozygous 58008117 3 116595345 116595346 C G 50 GENIC homozygous 58008120 3 116595575 116595576 A AG 49 GENIC homozygous 58008122 3 116595838 116595839 C A 73 GENIC homozygous 57617409 3 116596096 116596097 G A 64 GENIC homozygous 58008125 3 116596125 116596126 G T 58 GENIC homozygous 57617411 3 116596366 116596367 A - 50 GENIC homozygous 58008128 3 116596579 116596580 C A 62 GENIC possibly homozygous 57617413 3 116597457 116597458 A G 63 GENIC homozygous 58008131 3 116597810 116597811 C T 34 GENIC homozygous 57617419 3 116597941 116597942 A G 46 GENIC possibly homozygous 57617421 3 116599030 116599042 GTGTGTGTGTGT ------------ 4 GENIC homozygous 58008134 3 116599445 116599446 G A 45 GENIC homozygous 58008137 3 116599615 116599616 T C 69 GENIC homozygous 58008140 3 116600179 116600180 C T 58 GENIC homozygous 58008143 3 116600242 116600243 A - 54 GENIC homozygous 58008146 3 116600729 116600730 A G 51 GENIC homozygous 58008149 3 116600938 116600939 C A 39 GENIC homozygous 57617429 3 116601334 116601335 C T 21 GENIC homozygous 58008152 3 116601360 116601361 T TAAA 6 GENIC heterozygous 58008155 3 116601950 116601952 AT -- 72 GENIC homozygous 58008158 3 116602245 116602246 T C 66 GENIC homozygous 57617431 3 116603817 116603818 C T 56 GENIC homozygous 58008161 3 116604192 116604193 T TACAC 9 GENIC heterozygous 58008164 3 116605618 116605619 T C 44 GENIC homozygous 57617448 3 116605787 116605788 A G 47 GENIC homozygous 58008167 3 116605869 116605870 C A 59 GENIC possibly homozygous 58008170 3 116606757 116606758 T C 82 GENIC homozygous 58008173 3 116608357 116608358 C T 31 GENIC heterozygous 58008176 3 116609575 116609576 T G 42 GENIC homozygous 57617456 3 116611527 116611528 A G 21 GENIC heterozygous 58008179 3 116612327 116612328 A - 2 GENIC homozygous 58008182 3 116613311 116613312 A T 61 GENIC homozygous 57617460 3 116613808 116613809 G A 54 GENIC possibly homozygous 58008185 3 116614368 116614369 G C 73 GENIC homozygous 58008188 3 116614598 116614599 G A 53 GENIC possibly homozygous 58008191 3 116614756 116614757 C T 33 GENIC heterozygous 58008194 3 116614769 116614770 A G 40 GENIC heterozygous 58008197 3 116614782 116614783 G A 45 GENIC heterozygous 58008200 3 116614786 116614787 G A 47 GENIC heterozygous 57617468 3 116614802 116614803 G A 52 GENIC heterozygous 57617470 3 116614818 116614819 C T 57 GENIC heterozygous 58008203 3 116614859 116614860 T G 41 GENIC heterozygous 58008206 3 116614877 116614878 A AG 5 GENIC heterozygous 58008209 3 116614984 116614985 A AG 3 GENIC heterozygous 57617474 3 116614994 116614995 A AG 2 GENIC homozygous 57617476 3 116615001 116615002 G C 7 GENIC possibly homozygous 58008212 3 116615028 116615029 A AG 3 GENIC heterozygous 58008215 3 116615029 116615030 A G 8 GENIC heterozygous 57617478 3 116615249 116615250 G C 52 GENIC heterozygous 57617482 3 116615264 116615265 G A 44 GENIC heterozygous 57617484 3 116615341 116615342 T C 48 GENIC heterozygous 58008218 3 116615371 116615372 G A 61 GENIC heterozygous 57617486 3 116615546 116615547 T C 28 GENIC homozygous 58008221 3 116615551 116615552 A AG 12 GENIC heterozygous 58008224 3 116615553 116615554 A G 22 GENIC heterozygous 58008227 3 116615581 116615582 A G 21 GENIC heterozygous 58008230 3 116615623 116615624 A AG 4 GENIC homozygous 57617494 3 116615642 116615643 G - 9 GENIC possibly homozygous 58008233 3 116615752 116615753 A G 73 GENIC heterozygous 58008236 3 116615861 116615862 A AG 51 GENIC heterozygous 58008239 3 116615877 116615878 G A 85 GENIC heterozygous 58008242 3 116615878 116615879 G A 83 GENIC heterozygous 58008245 3 116615894 116615895 G A 74 GENIC heterozygous 58008248 3 116615955 116615956 G A 68 GENIC heterozygous 57617502 3 116615971 116615972 G C 58 GENIC heterozygous 57617504 3 116615978 116615979 T C 53 GENIC possibly homozygous 57617506 3 116615986 116615987 G A 65 GENIC heterozygous 58008251 3 116616015 116616016 A AG 32 GENIC heterozygous 57617508 3 116616030 116616031 G - 33 GENIC heterozygous 57617510 3 116616032 116616033 G A 65 GENIC heterozygous 57617512 3 116616048 116616049 G A 58 GENIC heterozygous 57617514 3 116616065 116616066 C T 52 GENIC heterozygous 57617516 3 116616078 116616079 A G 54 GENIC heterozygous 57617518 3 116616109 116616110 G - 17 GENIC heterozygous 57617520 3 116616111 116616112 G A 32 GENIC heterozygous 58008254 3 116616113 116616114 T C 31 GENIC possibly homozygous 57617522 3 116616127 116616128 G A 31 GENIC heterozygous 58008257 3 116616141 116616142 A AG 13 GENIC heterozygous 58008259 3 116616158 116616159 C G 31 GENIC heterozygous 58008262 3 116616173 116616174 G A 39 GENIC heterozygous 58008265 3 116616185 116616186 G A 39 GENIC heterozygous 58008268 3 116616189 116616190 C G 39 GENIC heterozygous 58008271 3 116616208 116616209 C T 44 GENIC homozygous 57617524 3 116616216 116616217 A AG 21 GENIC heterozygous 58008274 3 116616234 116616235 C G 60 GENIC heterozygous 58008277 3 116616402 116616403 G A 65 GENIC heterozygous 57617526 3 116616430 116616431 A AG 40 GENIC heterozygous 57617528 3 116616499 116616500 A G 76 GENIC heterozygous 57617532 3 116616666 116616667 G A 92 GENIC heterozygous 58008282 3 116616581 116616582 G C 65 GENIC heterozygous 58008279 3 116616603 116616604 T A 65 GENIC heterozygous 57617534 3 116616648 116616649 G - 47 GENIC heterozygous 57617536 3 116616681 116616682 G A 96 GENIC heterozygous 57617538 3 116616698 116616699 G A 101 GENIC heterozygous 57617540 3 116616714 116616715 G C 107 GENIC heterozygous 57617542 3 116616819 116616820 A G 127 GENIC heterozygous 57617544 3 116616866 116616867 G - 81 GENIC heterozygous 57617548 3 116616869 116616870 C G 135 GENIC heterozygous 58008285 3 116616884 116616885 A G 126 GENIC heterozygous 57617552 3 116616898 116616899 A AG 66 GENIC heterozygous 57617554 3 116616958 116616959 A - 69 GENIC heterozygous 57617556 3 116616959 116616960 A G 133 GENIC heterozygous 57617558 3 116616960 116616961 A G 131 GENIC heterozygous 57617560 3 116616977 116616978 G A 139 GENIC heterozygous 57617562 3 116616993 116616994 G A 140 GENIC heterozygous 57617564 3 116617026 116617027 C T 123 GENIC heterozygous 57617566 3 116617052 116617053 A G 111 GENIC heterozygous 57617568 3 116617070 116617071 G - 66 GENIC heterozygous 57617570 3 116617072 116617073 G A 103 GENIC heterozygous 57617572 3 116617088 116617089 C T 86 GENIC heterozygous 57617574 3 116618163 116618164 C A 57 GENIC homozygous 58008288 3 116618275 116618276 G A 83 GENIC heterozygous 57617576 3 116618279 116618280 A G 83 GENIC heterozygous 57617578 3 116618426 116618427 A G 101 GENIC heterozygous 57617580 3 116619098 116619099 C G 54 GENIC homozygous 58008291 3 116619527 116619528 C T 67 GENIC homozygous 58008294 3 116620752 116620762 TGTTTTGTTT ---------- 5 GENIC homozygous 57617588 3 116621546 116621547 G A 49 GENIC possibly homozygous 58008297 3 116625265 116625266 T TC 63 GENIC homozygous 57617592 3 116625602 116625603 A AC 16 GENIC homozygous 57617594 3 116625612 116625613 T TG 14 GENIC homozygous 57617596 3 116627331 116627332 G C 56 GENIC homozygous 58008300 3 116628087 116628088 T C 67 GENIC possibly homozygous 58008303 3 116630222 116630223 C G 37 GENIC heterozygous 57617604 3 116630405 116630406 T TGG 26 GENIC homozygous 57617610 3 116630696 116630697 C T 51 GENIC homozygous 58008306 3 116632991 116632992 C T 66 GENIC homozygous 57617616 3 116634103 116634104 T C 81 GENIC homozygous 57617620 3 116634652 116634653 G A 68 GENIC possibly homozygous 58008309 3 116635774 116635775 T - 57 GENIC homozygous 58008312 3 116639458 116639459 G A 40 GENIC homozygous 58008315 3 116639939 116639941 AA -- 35 GENIC heterozygous 57617636 3 116639942 116639946 AGAC ---- 36 GENIC heterozygous 57617638 3 116639951 116639952 C G 45 GENIC heterozygous 57617640 3 116639955 116639956 G C 45 GENIC heterozygous 57617642 3 116639981 116639982 G T 53 GENIC possibly homozygous 57617644 3 116640008 116640010 AG -- 52 GENIC homozygous 57617646 3 116640641 116640642 C T 48 GENIC possibly homozygous 58008318 3 116640962 116640963 A G 55 GENIC homozygous 58008321 3 116641508 116641509 A G 52 GENIC homozygous 58008324 3 116641556 116641557 C T 59 GENIC homozygous 58008327 3 116641559 116641560 A G 60 GENIC homozygous 58008330 3 116641662 116641663 A G 59 GENIC homozygous 58008333 3 116642195 116642196 T C 28 GENIC heterozygous 58008335 3 116642316 116642317 A AG 4 GENIC homozygous 57617700 3 116642520 116642521 A G 43 GENIC homozygous 58008338 3 116642884 116642885 A G 35 GENIC homozygous 57617707 3 116642901 116642902 G - 27 GENIC homozygous 57617709 3 116643296 116643297 T C 69 GENIC homozygous 57617713 3 116643432 116643433 C T 43 GENIC homozygous 57617715 3 116643445 116643446 C T 44 GENIC homozygous 58008341 3 116644624 116644625 G C 77 GENIC homozygous 57617717 3 116647007 116647008 A T 50 GENIC homozygous 57617721 3 116647361 116647362 A AT 65 GENIC homozygous 57617724 3 116647996 116647997 G A 51 GENIC heterozygous 57617726 3 116647996 116647997 G GCAGGCAGACAGA 39 GENIC homozygous 57617728 3 116648000 116648001 A G 44 GENIC heterozygous 57617730 3 116648923 116648924 G A 52 GENIC homozygous 58008344 3 116650081 116650082 G T 37 GENIC homozygous 57617734 3 116650374 116650375 G A 63 GENIC possibly homozygous 57617736 3 116650501 116650502 C T 60 GENIC homozygous 57617740 3 116651029 116651030 G A 87 GENIC homozygous 57617742 3 116651541 116651542 T - 53 GENIC homozygous 58008347 3 116652823 116652824 A T 58 GENIC possibly homozygous 57617744 3 116652981 116652982 A G 59 GENIC homozygous 57617746 3 116653103 116653104 T C 54 GENIC homozygous 57617748 3 116653467 116653468 G A 62 GENIC homozygous 58008350 3 116653642 116653643 C T 57 GENIC homozygous 57617750 3 116653751 116653755 ACAC ---- 48 GENIC homozygous 57617752 3 116654187 116654188 T G 66 GENIC homozygous 57617756 3 116654691 116654699 ACACACAC -------- 19 GENIC possibly homozygous 57617758 3 116654711 116654733 ACATATATATATATATATATAT ---------------------- 24 GENIC heterozygous 57617760 3 116656796 116656797 C A 65 GENIC homozygous 58008353 3 116657581 116657582 C T 64 GENIC homozygous 57617766 3 116655197 116655198 A T 46 GENIC homozygous 57617762 3 116656790 116656791 C CT 64 GENIC homozygous 57617764 3 116657879 116657880 C CA 25 GENIC heterozygous 57617768 3 116658797 116658798 C T 59 GENIC homozygous 58008356 3 116659035 116659042 TTGGGAA ------- 33 GENIC homozygous 57617772 3 116659083 116659084 C T 36 GENIC homozygous 57617774 3 116659261 116659262 A T 55 GENIC homozygous 57617776 3 116659550 116659551 T C 61 GENIC homozygous 57617778 3 116659636 116659637 G A 59 GENIC homozygous 57617780 3 116660014 116660015 T C 98 GENIC homozygous 57617782 3 116660786 116660787 G T 51 GENIC possibly homozygous 57617784 3 116661384 116661385 G A 68 GENIC homozygous 57617786 3 116661767 116661768 T G 69 GENIC homozygous 57617788 3 116662288 116662289 C G 30 GENIC homozygous 57617792 3 116662321 116662322 A G 42 GENIC possibly homozygous 58008359 3 116662524 116662525 A G 69 GENIC possibly homozygous 57617794 3 116662661 116662662 T C 83 GENIC homozygous 57617796 3 116662753 116662754 T C 82 GENIC homozygous 57617798 3 116663984 116663985 T A 55 GENIC homozygous 57617802 3 116664240 116664241 G A 62 GENIC homozygous 57617804 3 116664313 116664314 T C 61 GENIC homozygous 57617806 3 116665048 116665049 C T 68 GENIC homozygous 57617808 3 116665593 116665597 ACCC ---- 79 GENIC homozygous 57617810 3 116665828 116665829 A G 54 GENIC homozygous 57617812 3 116666314 116666315 A G 43 GENIC homozygous 57617814 3 116666869 116666870 G A 67 GENIC homozygous 58008362 3 116667308 116667309 T A 61 GENIC homozygous 57617818 3 116667487 116667488 G A 59 GENIC homozygous 57617822 3 116667657 116667658 G A 78 GENIC possibly homozygous 57617824 3 116668104 116668105 C - 71 GENIC homozygous 57617826 3 116668130 116668131 T C 76 GENIC homozygous 57617828 3 116668686 116668687 G C 71 GENIC possibly homozygous 57617830 3 116668713 116668714 A G 66 GENIC possibly homozygous 57617832 3 116668725 116668726 T C 74 GENIC possibly homozygous 57617834 3 116668748 116668749 A C 101 GENIC homozygous 57617836 3 116668748 116668749 A T 1 GENIC homozygous 58008365 3 116668782 116668783 A G 166 GENIC heterozygous 57617840 3 116668786 116668787 C T 176 GENIC heterozygous 57617842 3 116668856 116668857 T A 107 GENIC heterozygous 57617846 3 116669010 116669011 C T 54 GENIC homozygous 57617848 3 116669299 116669300 A G 43 GENIC homozygous 57617850 3 116669580 116669592 ATTTATTTATTT ------------ 18 GENIC homozygous 57617852 3 116669602 116669603 T G 28 GENIC heterozygous 58008368 3 116669799 116669800 C CTT 37 GENIC heterozygous 57617854 3 116669799 116669800 C CT 37 GENIC possibly homozygous 58008371 3 116670090 116670091 T C 54 GENIC homozygous 57617856 3 116670300 116670301 T C 56 GENIC homozygous 57617860 3 116670589 116670590 G - 40 GENIC homozygous 57617862 3 116671002 116671003 A G 58 GENIC homozygous 57617864 3 116671433 116671434 G A 31 GENIC heterozygous 57617866 3 116671458 116671460 CA -- 28 GENIC heterozygous 57617875 3 116671442 116671443 T TGC 31 GENIC heterozygous 57617868 3 116671443 116671444 A G 36 GENIC heterozygous 57617870 3 116671451 116671452 G A 30 GENIC heterozygous 57617873 3 116671479 116671481 GC -- 30 GENIC heterozygous 57617877 3 116671490 116671491 T C 38 GENIC heterozygous 57617879 3 116671515 116671516 G A 39 GENIC heterozygous 57617883 3 116671550 116671551 T TGC 45 GENIC heterozygous 57617887 3 116671634 116671635 T C 50 GENIC homozygous 57617889 3 116671787 116671788 C T 50 GENIC homozygous 58008374 3 116672032 116672033 T A 54 GENIC homozygous 57617891 3 116672112 116672113 G A 57 GENIC homozygous 58008376 3 116672295 116672296 C T 59 GENIC possibly homozygous 57617896 3 116672383 116672384 A G 43 GENIC homozygous 57617898 3 116672648 116672649 C T 63 GENIC homozygous 58008378 3 116672810 116672811 T C 65 GENIC homozygous 58008381 3 116672836 116672837 T A 61 GENIC homozygous 57617902 3 116674066 116674067 A T 54 GENIC homozygous 58008384 3 116675335 116675336 C T 76 GENIC homozygous 58008387 3 116676053 116676061 GGAGGGAC -------- 13 GENIC homozygous 57617920 3 116676110 116676111 C CACAGAG 18 GENIC homozygous 58008390 3 116678926 116678933 CAACAAC ------- 27 GENIC heterozygous 57617940 3 116680051 116680053 TT -- 70 GENIC homozygous 57617946 3 116680061 116680064 TTA --- 76 GENIC possibly homozygous 57617948 3 116680062 116680064 TA -- 46 GENIC heterozygous 57617950 3 116680609 116680610 C CA 11 GENIC heterozygous 57617960 3 116680610 116680611 C A 12 GENIC heterozygous 57617962 3 116680610 116680611 C CACA 11 GENIC heterozygous 57617964 3 116680643 116680644 C T 12 GENIC heterozygous 58008393 3 116680655 116680656 C T 14 GENIC heterozygous 58008396 3 116680665 116680666 A T 14 GENIC heterozygous 58008399 3 116680669 116680670 T C 14 GENIC heterozygous 58008402 3 116680676 116680677 G GCA 11 GENIC possibly homozygous 57617968 3 116680686 116680687 A ACC 11 GENIC possibly homozygous 57617970 3 116680703 116680705 CA -- 8 GENIC heterozygous 57617976 3 116680714 116680717 ACA --- 10 GENIC heterozygous 57617978 3 116680732 116680733 G GCA 4 GENIC heterozygous 58008405 3 116680760 116680761 G C 5 GENIC heterozygous 57617982 3 116680786 116680787 G A 4 GENIC homozygous 57617984 3 116680796 116680797 G C 4 GENIC homozygous 57617988 3 116680811 116680813 CA -- 2 GENIC homozygous 57617992 3 116680894 116680895 G A 4 GENIC homozygous 57617996 3 116680904 116680905 G C 5 GENIC homozygous 57617998 3 116680918 116680919 G GCA 6 GENIC homozygous 58008408 3 116680957 116680958 A T 9 GENIC heterozygous 58008411 3 116680980 116680981 T C 6 GENIC homozygous 58008413 3 116680994 116680995 G GCA 3 GENIC heterozygous 57618004 3 116681006 116681007 T C 6 GENIC homozygous 57618006 3 116681059 116681060 A T 15 GENIC heterozygous 58008416 3 116681063 116681064 C T 16 GENIC heterozygous 58008420 3 116681070 116681072 GC -- 13 GENIC heterozygous 57618008 3 116681072 116681073 G A 17 GENIC possibly homozygous 57618010 3 116681083 116681099 CCTGAATATACACATG ---------------- 19 GENIC heterozygous 57618012 3 116681129 116681130 C G 29 GENIC heterozygous 57618016 3 116681179 116681180 G GACACAC 15 GENIC homozygous 57618020 3 116683516 116683518 AA -- 40 GENIC homozygous 58008422 3 116683796 116683797 A - 35 GENIC homozygous 57618040 3 116683807 116683808 C CT 30 GENIC homozygous 57618042 3 116685258 116685259 T A 46 GENIC homozygous 57618046 3 116685607 116685609 TA -- 4 GENIC heterozygous 57618050 3 116685607 116685610 TAA --- 4 GENIC heterozygous 58008425