chr start stop reference nuc variant nuc depth genic status zygosity variant ID 20 52094420 52094421 T TATTTTCTATCATGTC 21 GENIC homozygous 45598364 20 52094740 52094741 G A 19 GENIC homozygous 45598366 20 52094886 52094887 T C 35 GENIC homozygous 45598368 20 52095217 52095218 A G 16 GENIC homozygous 45598370 20 52095581 52095582 C T 16 GENIC homozygous 45598372 20 52096291 52096292 A - 26 GENIC homozygous 45598374 20 52096307 52096308 C - 21 GENIC homozygous 45598376 20 52096309 52096310 A AC 21 GENIC homozygous 45598378 20 52096475 52096476 C - 13 GENIC possibly homozygous 45598382 20 52096479 52096481 AC -- 6 GENIC heterozygous 45598384 20 52096487 52096488 A C 15 GENIC possibly homozygous 45853324 20 52096493 52096494 T C 17 GENIC possibly homozygous 45853325 20 52096493 52096494 T A 17 GENIC heterozygous 45853326 20 52096503 52096504 A C 18 GENIC possibly homozygous 45598386 20 52096684 52096685 C T 21 GENIC homozygous 45598388 20 52097398 52097399 G C 26 GENIC homozygous 45598390 20 52097550 52097551 C T 26 GENIC homozygous 45598392 20 52097608 52097609 T C 19 GENIC homozygous 45598394 20 52097845 52097846 G A 19 GENIC homozygous 45598396 20 52097960 52097961 C T 22 GENIC homozygous 45598398 20 52098019 52098020 G C 28 GENIC homozygous 45598400 20 52098021 52098022 T C 28 GENIC homozygous 45598402 20 52098392 52098404 ACACACACACAC ------------ 6 GENIC homozygous 45598404 20 52098791 52098792 G T 15 GENIC homozygous 45598406 20 52099575 52099576 G - 28 GENIC homozygous 45598408 20 52099979 52099980 G GCCTA 22 GENIC homozygous 45598412 20 52100397 52100398 T TACACACACACACAC 8 GENIC homozygous 45853327 20 52100629 52100630 G A 23 GENIC homozygous 45598420 20 52102216 52102219 TTA --- 8 GENIC possibly homozygous 45598424 20 52102580 52102581 G A 23 GENIC homozygous 45598426 20 52102849 52102850 C T 27 GENIC homozygous 45598428 20 52102893 52102894 T C 24 GENIC homozygous 45598430 20 52103252 52103253 G A 27 GENIC homozygous 45598434 20 52103432 52103433 C CTG 32 GENIC homozygous 45598436 20 52103762 52103763 A T 21 GENIC homozygous 45598438 20 52104000 52104001 C T 15 GENIC homozygous 45598440 20 52104109 52104110 G - 21 GENIC homozygous 45598442 20 52104161 52104177 AACTTAATACTTTCCA ---------------- 17 GENIC homozygous 45598444 20 52104312 52104313 A G 18 GENIC homozygous 45598446 20 52104324 52104325 C T 21 GENIC homozygous 45598448 20 52104435 52104436 T C 27 GENIC homozygous 45598450 20 52104737 52104738 C T 18 GENIC homozygous 45598452 20 52105263 52105264 A G 3 GENIC homozygous 45598460 20 52105272 52105274 AA -- 5 GENIC homozygous 45715165 20 52105356 52105362 CTCTCC ------ 5 GENIC homozygous 45964441 20 52105379 52105406 TCTCTCTCTCTCTCTCTCTCTCTCTCT --------------------------- 7 GENIC homozygous 45964443 20 52105821 52105822 C G 16 GENIC homozygous 45598470 20 52105823 52105824 G C 15 GENIC homozygous 45598472 20 52105883 52105884 A G 22 GENIC homozygous 45598474 20 52105946 52105947 T A 25 GENIC homozygous 45598476 20 52106048 52106049 T C 41 GENIC homozygous 45598477 20 52106131 52106132 T A 25 GENIC homozygous 45598479 20 52106163 52106164 G A 32 GENIC homozygous 45598481 20 52106548 52106549 T G 11 GENIC homozygous 45598483 20 52106602 52106603 A G 13 GENIC homozygous 45598485 20 52106885 52106886 A - 3 GENIC homozygous 45598487 20 52106957 52107005 CTATATATATATGTATGTATATGTATATATATATATATATATATATGT ------------------------------------------------ 3 GENIC homozygous 45853332 20 52107020 52107021 T A 2 GENIC homozygous 45858333 20 52107253 52107254 C T 12 GENIC homozygous 45598495 20 52107475 52107476 G A 17 GENIC homozygous 45598497 20 52107572 52107573 T C 22 GENIC homozygous 45598499 20 52107769 52107770 T C 21 GENIC homozygous 45598501 20 52108075 52108076 G A 25 GENIC homozygous 45598503 20 52108224 52108225 T C 23 GENIC homozygous 45598505 20 52108371 52108372 A G 23 GENIC homozygous 45598507 20 52108423 52108424 A G 28 GENIC homozygous 45598509 20 52110592 52110593 C T 25 GENIC homozygous 45598511 20 52111662 52111663 G GA 18 GENIC homozygous 45598514 20 52111902 52111903 G A 23 GENIC homozygous 45598516 20 52111917 52111918 C T 21 GENIC homozygous 45598518 20 52112113 52112114 T C 16 GENIC homozygous 45598520 20 52112282 52112283 A G 14 GENIC homozygous 45598522 20 52112302 52112303 C T 16 GENIC homozygous 45598524 20 52112480 52112481 T C 26 GENIC homozygous 45598526 20 52112510 52112511 C T 28 GENIC homozygous 45598528 20 52112926 52112927 T C 15 GENIC homozygous 45749447 20 52112942 52112943 G GA 17 GENIC homozygous 45749448 20 52113416 52113424 CCACGCTA -------- 27 GENIC homozygous 45749449 20 52113583 52113584 T G 24 GENIC homozygous 45598534 20 52113976 52113977 C A 24 GENIC homozygous 45598535 20 52114038 52114039 A C 27 GENIC homozygous 45598537 20 52114204 52114205 C T 29 GENIC homozygous 45598539 20 52114224 52114225 C T 29 GENIC homozygous 45598541 20 52114501 52114502 T C 23 GENIC homozygous 45598543 20 52114712 52114713 A G 18 GENIC homozygous 45598545 20 52115102 52115103 C T 14 GENIC homozygous 45598546 20 52115533 52115539 AAAATC ------ 10 GENIC homozygous 45598548 20 52115656 52115657 A G 23 GENIC homozygous 45598550 20 52116893 52116894 C T 24 GENIC homozygous 45598585 20 52117098 52117099 A G 13 GENIC homozygous 45598587 20 52117124 52117125 A G 17 GENIC homozygous 45598589 20 52117216 52117217 A G 24 GENIC homozygous 45598591 20 52117229 52117230 C - 28 GENIC homozygous 45598593 20 52117231 52117232 A T 28 GENIC homozygous 45853333 20 52117317 52117318 T TA 26 GENIC possibly homozygous 45598595 20 52117340 52117341 A AG 33 GENIC homozygous 45598597 20 52117352 52117353 C G 35 GENIC possibly homozygous 45598599 20 52117394 52117395 G A 39 GENIC possibly homozygous 45598601 20 52117441 52117442 C T 44 GENIC possibly homozygous 45598603 20 52117543 52117544 C CT 36 GENIC homozygous 45598605 20 52117637 52117638 T C 32 GENIC homozygous 45598607 20 52117646 52117647 C G 26 GENIC homozygous 45598609 20 52117704 52117705 T C 36 GENIC homozygous 45598611 20 52117864 52117865 G A 29 GENIC homozygous 45598613 20 52117873 52117874 C T 31 GENIC homozygous 45749450 20 52117925 52117926 T C 20 GENIC homozygous 45598615 20 52117965 52117966 T TA 16 GENIC homozygous 45598616 20 52117985 52117986 C A 19 GENIC homozygous 45598618 20 52118069 52118070 T C 17 GENIC homozygous 45598620 20 52118270 52118271 T C 21 GENIC homozygous 45598622 20 52118393 52118394 G C 19 GENIC homozygous 45598624 20 52119167 52119168 G - 2 GENIC homozygous 45853334 20 52119407 52119408 A - 26 GENIC homozygous 45749451 20 52120498 52120499 A - 30 GENIC homozygous 45749452 20 52120930 52120931 A G 21 GENIC homozygous 45653021 20 52120937 52120938 C T 20 GENIC homozygous 45653022 20 52120963 52120964 G A 21 GENIC homozygous 45653023 20 52121007 52121008 A G 21 GENIC homozygous 45653025 20 52121218 52121219 C T 20 GENIC homozygous 45653026 20 52121334 52121335 C A 17 GENIC homozygous 45653027 20 52122911 52122912 A G 16 GENIC homozygous 45653028 20 52123930 52123931 G GA 8 GENIC homozygous 45653031 20 52123955 52123960 AAACA ----- 6 GENIC homozygous 45653033 20 52124186 52124187 G GACCGAC 14 GENIC homozygous 45598649 20 52108756 52108774 ACACACACACACACACAT ------------------ 12 GENIC heterozygous 45833552 20 52121593 52121594 A G 22 GENIC homozygous 45598647 20 52125398 52125399 G A 26 GENIC homozygous 45653035 20 52125669 52125670 G A 12 GENIC homozygous 45653036 20 52126679 52126680 T G 20 GENIC homozygous 45653037 20 52126969 52126970 A C 23 GENIC homozygous 45653038 20 52127162 52127163 G T 36 GENIC homozygous 45653039 20 52127440 52127441 T A 30 GENIC homozygous 45653040 20 52127950 52127951 T C 18 GENIC homozygous 45598654 20 52127990 52127991 C T 24 GENIC homozygous 45749453 20 52128343 52128344 T TCGTA 19 GENIC homozygous 45749454 20 52128901 52128902 T C 19 GENIC homozygous 45598656 20 52128928 52128929 C T 14 GENIC homozygous 45653042 20 52129241 52129242 A G 18 GENIC homozygous 45749455 20 52129843 52129844 A T 29 GENIC homozygous 45653043 20 52131792 52131793 C G 26 GENIC homozygous 45598658 20 52130394 52130395 A AT 28 GENIC homozygous 45653044 20 52130493 52130494 C A 34 GENIC homozygous 45653045 20 52130755 52130756 T A 25 GENIC homozygous 45653046 20 52132381 52132382 G A 27 GENIC homozygous 45749456 20 52133364 52133365 T G 24 GENIC homozygous 45749457 20 52134177 52134192 CAGGCACTTGCTGCC --------------- 9 GENIC homozygous 45598669 20 52135562 52135563 A G 19 GENIC homozygous 45598671 20 52135663 52135664 G A 24 GENIC homozygous 45598673 20 52136057 52136058 A G 20 GENIC homozygous 45598675 20 52136255 52136261 TTTTTT ------ 21 GENIC heterozygous 45896961 20 52138761 52138762 T A 16 GENIC homozygous 45598683 20 52138916 52138917 A C 26 GENIC homozygous 45598685 20 52138917 52138918 C A 26 GENIC homozygous 45598687 20 52139754 52139755 G A 16 GENIC homozygous 45598688 20 52140377 52140378 G C 26 GENIC homozygous 45598690 20 52140928 52140939 AAAGGAATAGT ----------- 11 GENIC homozygous 45653059 20 52142087 52142088 A C 25 GENIC homozygous 45598692 20 52143929 52143930 G A 13 GENIC homozygous 45653060 20 52144012 52144013 T G 22 GENIC homozygous 45749458 20 52144397 52144398 T C 16 GENIC homozygous 45598696 20 52144404 52144405 T C 18 GENIC homozygous 45598698 20 52144467 52144468 G A 18 GENIC homozygous 45598700 20 52145111 52145112 C - 26 GENIC homozygous 45598702 20 52145112 52145113 T A 27 GENIC homozygous 45833562 20 52146981 52146982 C T 13 GENIC homozygous 45653062 20 52155648 52155649 A C 11 GENIC homozygous 45598724 20 52156762 52156763 T A 16 GENIC homozygous 45749459 20 52157452 52157453 G A 37 GENIC homozygous 45749460 20 52157917 52157931 CAGAGGGCAGAGGG -------------- 19 GENIC homozygous 45964445 20 52158478 52158479 G A 34 GENIC possibly homozygous 45598734 20 52159017 52159018 C T 38 GENIC homozygous 45598741 20 52159410 52159411 G A 13 GENIC homozygous 45598743 20 52159512 52159513 G - 11 GENIC homozygous 45598745 20 52159848 52159854 TTGTTG ------ 13 GENIC homozygous 45598747 20 52160128 52160129 G A 23 GENIC homozygous 45598751 20 52161195 52161196 C A 18 GENIC homozygous 45653067 20 52161242 52161243 G A 17 GENIC homozygous 45749461 20 52162010 52162011 T A 22 GENIC homozygous 45598755 20 52163527 52163528 T - 28 GENIC homozygous 45598757 20 52164348 52164349 G GA 15 GENIC homozygous 45653069 20 52164489 52164490 A G 15 GENIC homozygous 45598759 20 52164493 52164494 A G 15 GENIC homozygous 45598761 20 52164495 52164496 A G 14 GENIC homozygous 45715187 20 52164516 52164532 CACTCATACGCGCGCG ---------------- 7 GENIC heterozygous 45598765 20 52164729 52164730 A - 10 GENIC homozygous 45598769 20 52164779 52164780 T C 9 GENIC homozygous 45749462 20 52164784 52164785 C CT 9 GENIC homozygous 45598771 20 52164860 52164861 A G 24 GENIC homozygous 45598777 20 52165218 52165219 C A 19 GENIC homozygous 45749463 20 52165284 52165285 C T 23 GENIC homozygous 45598779 20 52165651 52165652 A T 24 GENIC homozygous 45598781 20 52165816 52165817 G C 25 GENIC homozygous 45598783 20 52165925 52165926 C CAAGCTCT 20 GENIC homozygous 45598785 20 52165946 52165947 C T 22 GENIC homozygous 45749464 20 52166421 52166422 A G 16 GENIC homozygous 45598789 20 52166754 52166755 A AT 15 GENIC homozygous 45598793 20 52167673 52167677 TAAG ---- 30 GENIC homozygous 45598797 20 52168160 52168162 GT -- 5 GENIC homozygous 45598803 20 52168637 52168638 A C 32 GENIC homozygous 45598805 20 52169232 52169233 C G 18 GENIC homozygous 45598807 20 52169644 52169645 A C 11 GENIC homozygous 45853341 20 52169645 52169646 T A 13 GENIC homozygous 45853342 20 52169652 52169653 A C 12 GENIC homozygous 45876447 20 52169766 52169781 TCAGAAAGGAAACGC --------------- 12 GENIC homozygous 45598811 20 52169943 52169946 TTT --- 6 GENIC heterozygous 45653073 20 52170339 52170340 T C 18 GENIC homozygous 45598815 20 52170431 52170432 C CACACACACAT 12 GENIC heterozygous 45882818 20 52170503 52170504 T C 14 GENIC homozygous 45653075 20 52170666 52170667 C A 20 GENIC homozygous 45598819 20 52170771 52170772 C T 30 GENIC homozygous 45598821 20 52171029 52171030 C A 11 GENIC homozygous 45749465 20 52171037 52171038 T C 11 GENIC homozygous 45749466 20 52171239 52171240 C T 18 GENIC homozygous 45598823 20 52171361 52171362 C T 11 GENIC homozygous 45653076 20 52171386 52171387 C CTT 14 GENIC heterozygous 45598825 20 52171386 52171387 C CT 14 GENIC possibly homozygous 45653077 20 52171700 52171701 C T 18 GENIC homozygous 45598827 20 52171808 52171809 A G 18 GENIC homozygous 45598829 20 52171827 52171828 A T 17 GENIC homozygous 45598830 20 52171893 52171894 G GAA 9 GENIC homozygous 45598832 20 52172118 52172119 C A 10 GENIC homozygous 45853345 20 52172329 52172330 T G 11 GENIC homozygous 45598835 20 52172521 52172522 G A 18 GENIC homozygous 45598837 20 52172642 52172643 A G 19 GENIC homozygous 45598839 20 52173080 52173081 T C 25 GENIC homozygous 45598843 20 52173087 52173088 G A 20 GENIC homozygous 45598845 20 52173095 52173096 A G 15 GENIC homozygous 45598847 20 52174516 52174517 G T 24 GENIC homozygous 45598857 20 52175148 52175149 C T 13 GENIC homozygous 45598863 20 52176006 52176007 A C 15 GENIC homozygous 45653080 20 52176560 52176561 A G 22 GENIC homozygous 45598866 20 52177599 52177600 G - 20 GENIC homozygous 45598872 20 52177614 52177615 G A 23 GENIC homozygous 45598874 20 52178074 52178075 A T 21 GENIC homozygous 45598876 20 52178818 52178819 T C 26 GENIC homozygous 45598884 20 52178233 52178234 G A 20 GENIC homozygous 45598878 20 52178586 52178587 T - 16 GENIC homozygous 45598880 20 52178674 52178675 G A 12 GENIC homozygous 45598882 20 52164518 52164532 CTCATACGCGCGCG -------------- 7 GENIC heterozygous 46010344 20 52174937 52174945 TCTCTCTC -------- 9 GENIC homozygous 46010345 20 52179076 52179077 C T 12 GENIC homozygous 45598886 20 52180240 52180241 A G 21 GENIC homozygous 45598887 20 52180287 52180288 C G 18 GENIC possibly homozygous 45653081 20 52180333 52180334 G C 13 GENIC homozygous 45598889 20 52180432 52180433 G A 18 GENIC homozygous 45749467 20 52180468 52180469 A G 16 GENIC homozygous 45598892 20 52180556 52180557 C G 13 GENIC homozygous 45598894 20 52180669 52180671 CC -- 4 GENIC heterozygous 45598900 20 52180682 52180684 CC -- 4 GENIC heterozygous 45870507 20 52180711 52180712 A - 7 GENIC homozygous 45598905 20 52180969 52180970 C T 12 GENIC homozygous 45598907 20 52181106 52181107 C CTA 11 GENIC homozygous 45598909 20 52181538 52181539 C T 13 GENIC homozygous 45598911 20 52181593 52181594 G A 15 GENIC homozygous 45598912 20 52181941 52181945 ACTC ---- 19 GENIC homozygous 45598918 20 52182003 52182004 C G 23 GENIC homozygous 45598920 20 52182130 52182131 T G 21 GENIC homozygous 45598922 20 52182131 52182132 G T 21 GENIC homozygous 45598924