chr start stop reference nuc variant nuc depth genic status zygosity variant ID 2 49686760 49686761 T C 25 GENIC homozygous 58813202 2 49686857 49686873 ACACACACACACACAC ---------------- 8 GENIC heterozygous 61186888 2 49687401 49687402 C G 20 GENIC homozygous 59685588 2 49687402 49687403 T A 20 GENIC homozygous 59685590 2 49689097 49689098 A C 17 GENIC homozygous 58813206 2 49689333 49689334 G T 17 GENIC homozygous 58813208 2 49689905 49689906 C T 16 GENIC homozygous 58813210 2 49689986 49689987 A AAT 14 GENIC heterozygous 58813212 2 49689986 49689987 A AAAT 14 GENIC heterozygous 58813214 2 49689986 49689987 A AT 14 GENIC heterozygous 59803067 2 49690082 49690083 G C 18 GENIC homozygous 58813216 2 49690096 49690097 G A 19 GENIC homozygous 58813218 2 49690330 49690331 A - 21 GENIC homozygous 58813220 2 49690433 49690434 C T 22 GENIC homozygous 58813222 2 49690520 49690521 G GA 18 GENIC homozygous 58813224 2 49691002 49691003 G GA 14 GENIC homozygous 58813226 2 49691122 49691123 T C 14 GENIC homozygous 58813228 2 49691522 49691523 C G 30 GENIC homozygous 58813230 2 49691682 49691683 G T 15 GENIC homozygous 58813232 2 49691868 49691869 G A 18 GENIC homozygous 58813234 2 49692394 49692395 T C 22 GENIC homozygous 58813236 2 49692535 49692536 A G 12 GENIC homozygous 58813238 2 49692557 49692665 AAGACAGAAAAGTGTCGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGGAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGCAAAAAAAAAAAAAAAAAA ------------------------------------------------------------------------------------------------------------ 15 GENIC homozygous 60443609 2 49692982 49692983 T C 1 GENIC homozygous 60443610 2 49692986 49692991 TCTCT ----- 1 GENIC homozygous 60443611 2 49693080 49693081 A C 13 GENIC homozygous 58813244 2 49693341 49693342 A AGT 10 GENIC possibly homozygous 58813246 2 49694209 49694221 ACACACACACAC ------------ 6 GENIC homozygous 60479200 2 49694455 49694456 G A 37 GENIC homozygous 58813250 2 49694783 49694784 G A 18 GENIC homozygous 58813256 2 49694854 49694855 A G 20 GENIC homozygous 58813258 2 49694916 49694917 C T 17 GENIC homozygous 58813261 2 49694978 49694979 A G 20 GENIC homozygous 58813263 2 49694988 49694989 G C 21 GENIC homozygous 58813265 2 49695008 49695009 G A 18 GENIC homozygous 58813266 2 49695261 49695262 C T 31 GENIC homozygous 58813268 2 49695420 49695421 A G 24 GENIC homozygous 58813270 2 49695648 49695649 T TCAGACAGACAGA 10 GENIC homozygous 58813274 2 49695701 49695703 AG -- 3 GENIC homozygous 58813282 2 49695776 49695777 G GCA 3 GENIC homozygous 58813286 2 49695784 49695785 G A 3 GENIC homozygous 59685598 2 49695786 49695787 G A 3 GENIC homozygous 59685601 2 49696122 49696123 G - 19 GENIC homozygous 58813293 2 49696450 49696451 C CCCCCCA 1 GENIC homozygous 58813295 2 49696769 49696770 A ATGTGTGTGTGTGTGTGTGTG 3 GENIC homozygous 60557012 2 49696906 49696907 G A 13 GENIC heterozygous 58813299 2 49697290 49697291 T A 24 GENIC homozygous 58813301 2 49697422 49697423 G A 31 GENIC homozygous 58813302 2 49697473 49697474 G C 22 GENIC homozygous 58813304 2 49697864 49697909 CTGTCATCCAGTGCCACTTGGTCTTCAATATTGTCAGACCCTCAG --------------------------------------------- 18 GENIC homozygous 60443613 2 49698003 49698004 G A 23 GENIC homozygous 58813306 2 49698006 49698007 G T 24 GENIC homozygous 58813308 2 49698082 49698111 CCTTTTTTTTTTTTTTTTTTTTTTTTTGT ----------------------------- 11 GENIC homozygous 58813310 2 49698113 49698114 T - 9 GENIC homozygous 58813312 2 49698124 49698125 A G 10 GENIC homozygous 58813314 2 49698435 49698436 A G 25 GENIC homozygous 58813316 2 49698446 49698447 G A 28 GENIC homozygous 58813318 2 49698538 49698539 A G 32 GENIC homozygous 59685604 2 49698669 49698670 G A 27 GENIC homozygous 59685607 2 49698820 49698821 T C 31 GENIC homozygous 59685610 2 49698873 49698874 G A 20 GENIC homozygous 59685612 2 49699039 49699040 T C 17 GENIC homozygous 59685615 2 49699329 49699330 C T 29 GENIC homozygous 59685617 2 49699441 49699442 G A 26 GENIC homozygous 59685619 2 49699483 49699484 A G 24 GENIC homozygous 59685622 2 49699634 49699642 GAGAGAGA -------- 10 GENIC homozygous 60479202 2 49699682 49699683 A AT 12 GENIC homozygous 59685626 2 49699705 49699714 TTTTTTTTC --------- 10 GENIC homozygous 59685631 2 49699922 49699923 T C 19 GENIC homozygous 59685633 2 49700017 49700018 C T 20 GENIC homozygous 59685635 2 49700291 49700292 C - 18 GENIC homozygous 58813324 2 49700621 49700622 G A 22 GENIC homozygous 59685638 2 49700987 49700989 CC -- 2 GENIC homozygous 58813328 2 49701006 49701010 CACT ---- 7 GENIC homozygous 59685641 2 49701234 49701235 A G 21 GENIC homozygous 59685643 2 49701240 49701241 G A 19 GENIC homozygous 59685646 2 49701464 49701472 ACACACAC -------- 2 GENIC homozygous 60479203 2 49701594 49701595 C G 15 GENIC homozygous 58813330 2 49701812 49701813 C CGG 4 GENIC homozygous 59685648 2 49701958 49701959 C CAT 1 GENIC homozygous 59685667 2 49702253 49702254 C A 21 GENIC homozygous 59685669 2 49702310 49702311 T C 20 GENIC homozygous 59685672 2 49702578 49702579 G A 25 GENIC homozygous 59685674 2 49702592 49702593 C A 24 GENIC homozygous 59685676 2 49702690 49702691 G T 22 GENIC homozygous 59685679 2 49702978 49702979 G T 9 GENIC homozygous 59685681 2 49702988 49702992 GACT ---- 11 GENIC homozygous 60479204 2 49703155 49703156 C CTTT 13 GENIC possibly homozygous 59685685 2 49703155 49703156 C CTT 13 GENIC heterozygous 59685687 2 49703352 49703353 A G 22 GENIC homozygous 59685689 2 49703469 49703470 T G 19 GENIC homozygous 59685692 2 49704396 49704397 C T 16 GENIC homozygous 58813342 2 49704876 49704877 T TACA 15 GENIC homozygous 58813344 2 49706253 49706254 T G 25 GENIC homozygous 59685704 2 49706290 49706291 A G 25 GENIC homozygous 59685707 2 49706586 49706587 C CT 15 GENIC heterozygous 59685709 2 49706586 49706587 C CTT 15 GENIC possibly homozygous 59685712 2 49706802 49706803 T C 27 GENIC homozygous 59685715 2 49706992 49706996 AAAC ---- 23 GENIC homozygous 59685717 2 49707050 49707051 G C 27 GENIC homozygous 59685719 2 49707193 49707194 C T 18 GENIC homozygous 58813358 2 49707618 49707619 A C 18 GENIC homozygous 59685722 2 49708100 49708101 T C 7 GENIC homozygous 58813378 2 49708133 49708134 C A 13 GENIC homozygous 59685725 2 49708726 49708727 A G 20 GENIC homozygous 58813388 2 49708869 49708870 G A 19 GENIC homozygous 59685728 2 49708913 49708914 C T 22 GENIC homozygous 60443614 2 49709195 49709196 A G 24 GENIC homozygous 58813404 2 49710007 49710008 T C 29 GENIC homozygous 58813424 2 49710724 49710726 AA -- 12 GENIC heterozygous 59685731 2 49711357 49711358 G A 21 GENIC homozygous 58813437 2 49711421 49711422 G C 18 GENIC homozygous 58813439 2 49711587 49711588 C CAA 3 GENIC heterozygous 58813441 2 49711587 49711588 C CAACA 3 GENIC heterozygous 59685733 2 49711663 49711665 AT -- 7 GENIC homozygous 58813447 2 49711698 49711699 C G 13 GENIC homozygous 59685740 2 49711941 49711947 AAAAAA ------ 7 GENIC homozygous 60479205 2 49712197 49712199 AA -- 11 GENIC heterozygous 60443615 2 49712489 49712490 T C 16 GENIC homozygous 58813455 2 49712561 49712562 T TTGG 3 GENIC homozygous 60539444 2 49712863 49712864 A G 18 GENIC possibly homozygous 58813461 2 49712899 49712900 T G 21 GENIC homozygous 58813463 2 49713619 49713620 G C 30 GENIC homozygous 58813469 2 49713861 49713862 G T 24 GENIC homozygous 59685748 2 49713868 49713869 C A 25 GENIC homozygous 59685750 2 49713926 49713928 TA -- 24 GENIC homozygous 58813471 2 49714100 49714101 A G 23 GENIC homozygous 58813473 2 49714143 49714144 A C 25 GENIC homozygous 59685753 2 49714519 49714520 C CA 11 GENIC homozygous 59685756 2 49714546 49714547 C CA 16 GENIC homozygous 59685759 2 49714621 49714622 T TGC 14 GENIC homozygous 59685761 2 49714622 49714623 A ATGTGTGTGTGTGTGTGTGTG 6 GENIC heterozygous 60479206 2 49714622 49714623 A ATGTGTGTGTGTGTGTGTGTGTG 6 GENIC heterozygous 60479207 2 49714707 49714708 A C 14 GENIC homozygous 58813481 2 49714737 49714738 A - 9 GENIC possibly homozygous 58813483 2 49714749 49714758 AAAAAAAAA --------- 8 GENIC heterozygous 61657367 2 49714757 49714758 A AAC 5 GENIC heterozygous 60479208 2 49714922 49714923 T C 14 GENIC homozygous 58813487 2 49715274 49715282 TGTGTGTG -------- 4 GENIC heterozygous 60479209 2 49715276 49715282 TGTGTG ------ 4 GENIC heterozygous 60479210 2 49715387 49715388 A - 17 GENIC homozygous 58813489 2 49715539 49715540 T C 18 GENIC homozygous 58813491 2 49716110 49716111 A G 20 GENIC possibly homozygous 58813495 2 49716157 49716167 GTGTGTGTGT ---------- 11 GENIC possibly homozygous 58813497 2 49716397 49716398 A C 20 GENIC homozygous 58813499 2 49716939 49716940 C T 11 GENIC homozygous 59685766 2 49717173 49717174 G C 19 GENIC homozygous 58813501 2 49717191 49717192 C CT 21 GENIC homozygous 59685768 2 49717279 49717280 T C 18 GENIC homozygous 58813505 2 49717493 49717494 G A 32 GENIC homozygous 58813507 2 49717671 49717672 A G 18 GENIC homozygous 58813509 2 49717948 49717949 G - 28 GENIC homozygous 58813515 2 49718050 49718051 T C 35 GENIC homozygous 58813516 2 49718132 49718133 G A 32 GENIC homozygous 58813518 2 49718177 49718178 A T 34 GENIC homozygous 58813520 2 49718320 49718321 C CAG 26 GENIC homozygous 58813522 2 49718340 49718341 A AAG 21 GENIC homozygous 58813524 2 49718674 49718675 A - 4 GENIC heterozygous 60539445 2 49718713 49718714 G GACC 9 GENIC homozygous 60479211 2 49718715 49718719 ATAT ---- 11 GENIC homozygous 60479212 2 49719572 49719582 TGTGTGTGAG ---------- 20 GENIC homozygous 58813531 2 49719615 49719616 A G 28 GENIC homozygous 58813533 2 49719648 49719665 TGTGTGTGTGTGAGAAA ----------------- 23 GENIC homozygous 58813535 2 49719687 49719688 C - 23 GENIC homozygous 58813542 2 49719805 49719806 G A 15 GENIC homozygous 58813544 2 49719821 49719822 C CT 13 GENIC homozygous 58813546 2 49719829 49719830 C T 15 GENIC homozygous 58813547 2 49719974 49719975 C T 18 GENIC homozygous 58813549 2 49720042 49720043 T C 26 GENIC homozygous 58813551 2 49720110 49720111 A G 22 GENIC homozygous 58813553 2 49720156 49720157 A ATAAAT 24 GENIC homozygous 58813555 2 49720170 49720171 G A 23 GENIC homozygous 58813556 2 49720222 49720223 T C 22 GENIC homozygous 59685771 2 49720269 49720270 T C 13 GENIC homozygous 58813557 2 49720349 49720350 T A 20 GENIC homozygous 58813558 2 49720448 49720449 G T 19 GENIC homozygous 59685774 2 49720560 49720561 A - 19 GENIC homozygous 59685776 2 49720816 49720817 G A 11 GENIC homozygous 58813559 2 49721080 49721081 G A 1 GENIC homozygous 60539446 2 49721082 49721090 TTTAAGGG -------- 3 GENIC homozygous 59685793 2 49721090 49721091 A AC 3 GENIC homozygous 59685796 2 49721093 49721096 GAT --- 4 GENIC homozygous 59685799 2 49721103 49721104 A T 4 GENIC homozygous 58813567 2 49721229 49721230 G A 11 GENIC homozygous 58813568 2 49721289 49721290 G A 16 GENIC homozygous 59685805 2 49721303 49721304 C T 16 GENIC homozygous 59685807 2 49721344 49721345 G C 16 GENIC homozygous 59685810 2 49721642 49721643 C T 20 GENIC homozygous 58813571 2 49721662 49721663 C CTGTG 9 GENIC possibly homozygous 59685813 2 49721662 49721663 C CTG 9 GENIC heterozygous 60539447 2 49721763 49721764 G A 22 GENIC homozygous 58813573 2 49721819 49721820 C T 18 GENIC homozygous 58813574 2 49721830 49721831 T - 16 GENIC homozygous 59685820 2 49721851 49721852 T C 17 GENIC homozygous 58813575 2 49721857 49721858 T C 19 GENIC homozygous 58813576 2 49721871 49721872 C T 18 GENIC homozygous 58813577 2 49721889 49721890 G C 17 GENIC homozygous 58813578 2 49721892 49721893 G C 19 GENIC homozygous 58813579 2 49721923 49721924 G C 23 GENIC homozygous 58813580 2 49722062 49722063 C T 23 GENIC homozygous 59685822 2 49722280 49722281 G A 26 GENIC homozygous 58813581 2 49722458 49722459 T TA 11 GENIC homozygous 58813582 2 49722474 49722475 C T 13 GENIC homozygous 58813583 2 49722508 49722509 G A 19 GENIC homozygous 58813584 2 49722589 49722590 G GAA 12 GENIC heterozygous 59685825 2 49722589 49722590 G GAAAAAAAAAAAAAAAAA 12 GENIC heterozygous 60479213 2 49722810 49722931 AAAAACAAACACAGAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTTGGTCCCCAGCTCCGAAAAAAAGAACCAAAAAAAAAAAAAAAAAAA ------------------------------------------------------------------------------------------------------------------------- 28 GENIC homozygous 60443616 2 49723133 49723134 C T 30 GENIC homozygous 58813586 2 49723417 49723418 T A 18 GENIC homozygous 58813587 2 49723450 49723451 T A 24 GENIC homozygous 58813588 2 49723452 49723453 G A 24 GENIC homozygous 58813589 2 49723453 49723454 T G 25 GENIC homozygous 58813590 2 49723620 49723621 G - 13 GENIC homozygous 60566453 2 49723658 49723668 GTGTGCGCGC ---------- 10 GENIC heterozygous 60566454 2 49723753 49723754 T C 21 GENIC homozygous 58813593 2 49723823 49723824 A - 10 GENIC homozygous 58813594 2 49723831 49723832 A AAAAAAAACAAAAAAC 6 GENIC heterozygous 60479215 2 49724202 49724203 G A 11 GENIC homozygous 59685834 2 49726584 49726585 A G 27 GENIC homozygous 58813598 2 49726630 49726631 C CTGTGTGTG 7 GENIC heterozygous 59685837 2 49726630 49726631 C CTGTGTGTGTG 7 GENIC heterozygous 60479216 2 49726714 49726715 G A 20 GENIC homozygous 58813601 2 49726761 49726762 C T 24 GENIC homozygous 59685839 2 49727033 49727034 A AAAAT 15 GENIC homozygous 58813602 2 49727417 49727418 G GACAC 4 GENIC heterozygous 60539448 2 49727417 49727418 G GACACAC 4 GENIC heterozygous 60479217 2 49727830 49727831 T A 16 GENIC homozygous 59685842 2 49728617 49728618 T C 15 GENIC homozygous 59685845 2 49730521 49730522 T C 18 GENIC homozygous 59685850 2 49730765 49730766 G A 14 GENIC homozygous 59685853 2 49730883 49730885 TC -- 24 GENIC possibly homozygous 59685856 2 49731057 49731058 G GCAGGAGAAAGAGGAGGAGGAGGAAGAAGAA 19 GENIC homozygous 60479218 2 49731124 49731125 A AAGG 13 GENIC homozygous 59685865 2 49731207 49731208 T TA 14 GENIC homozygous 59685867 2 49731789 49731906 GAAAGCAGGAATAAGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAAAAAAAAAAAAAAGATTAA --------------------------------------------------------------------------------------------------------------------- 30 GENIC homozygous 60443617 2 49731951 49731952 A G 17 GENIC homozygous 59685870 2 49732438 49732441 TAA --- 10 GENIC heterozygous 58813609 2 49732677 49732678 G T 21 GENIC homozygous 59685873 2 49733082 49733083 G GGTGTGTGTGTGTGTGTGTGTGTGTGTGT 4 GENIC heterozygous 60539449 2 49733082 49733083 G GGTGTGTGTGTGTGTGTGTGTGTGTGT 4 GENIC heterozygous 60479219 2 49733682 49733683 C A 21 GENIC homozygous 59685885 2 49733818 49733819 G A 20 GENIC homozygous 59685888 2 49734156 49734157 T TGTTCTGGAACTCAC 29 GENIC homozygous 59685890 2 49734249 49734250 G T 21 GENIC homozygous 59685893 2 49734764 49734765 C CG 2 GENIC homozygous 58813611 2 49734783 49734784 A AAG 5 GENIC homozygous 60557014 2 49734798 49734799 G GAAA 4 GENIC homozygous 58813614 2 49735242 49735243 A AG 3 GENIC heterozygous 60208445 2 49735435 49735448 CAGAAAGCATCAC ------------- 12 GENIC homozygous 59685897 2 49735510 49735511 G A 18 GENIC homozygous 59685899 2 49735612 49735613 C T 16 GENIC homozygous 59685901 2 49736355 49736358 AGA --- 10 GENIC homozygous 59685903 2 49736671 49736672 A T 6 GENIC homozygous 58813617