chr start stop reference nuc variant nuc depth genic status zygosity variant ID 2 46478761 46478762 C - 39 GENIC homozygous 58796357 2 46478915 46478916 T G 28 GENIC homozygous 58796358 2 46479046 46479047 A ATT 1 GENIC homozygous 58796359 2 46479967 46479968 C T 51 GENIC heterozygous 58796360 2 46480655 46480656 A T 32 GENIC heterozygous 58796361 2 46480995 46480996 T - 33 GENIC homozygous 58796362 2 46483362 46483363 T TTTA 4 GENIC heterozygous 58796363 2 46483485 46483486 T TC 14 GENIC homozygous 58796364 2 46486988 46486989 G - 20 GENIC homozygous 58796365 2 46489195 46489196 C G 47 GENIC heterozygous 58796366 2 46490445 46490446 C G 53 GENIC homozygous 58796367 2 46492604 46492605 T - 6 GENIC homozygous 58796368 2 46492923 46492924 A AGTTAGGATTACCATTG 44 GENIC homozygous 58796369 2 46495181 46495182 A AACAC 12 GENIC heterozygous 58796370 2 46495181 46495182 A AACACAC 12 GENIC heterozygous 58796371 2 46496188 46496189 A T 29 GENIC homozygous 58796372 2 46497350 46497351 A AT 14 GENIC possibly homozygous 58796373 2 46498390 46498392 TT -- 18 GENIC heterozygous 58796374 2 46498391 46498392 T - 18 GENIC possibly homozygous 58796375 2 46500629 46500630 C CT 14 GENIC possibly homozygous 58796376 2 46502778 46502779 G A 48 GENIC heterozygous 58796377 2 46502788 46502789 G A 56 GENIC heterozygous 58796378 2 46502809 46502811 TA -- 47 GENIC heterozygous 58796379 2 46502883 46502884 A T 47 GENIC heterozygous 58796380 2 46503931 46503932 C CTT 7 GENIC heterozygous 58796381 2 46504211 46504212 C CCTT 24 GENIC homozygous 58796382 2 46505786 46505787 A G 22 GENIC homozygous 58796383 2 46507447 46507448 C CT 26 GENIC possibly homozygous 58796384 2 46507555 46507556 A G 31 GENIC homozygous 58796385 2 46508826 46508827 T C 46 GENIC homozygous 58796386 2 46510004 46510005 T C 30 GENIC homozygous 58796387 2 46510253 46510254 T C 38 GENIC homozygous 58796388 2 46512079 46512080 T C 44 GENIC homozygous 58796389 2 46512330 46512334 AGGG ---- 26 GENIC homozygous 58796390 2 46514408 46514409 T TG 20 GENIC homozygous 58796391 2 46517986 46517987 A AAAGG 4 GENIC homozygous 58796392 2 46518732 46518733 A G 30 GENIC homozygous 58796393 2 46519156 46519157 C T 28 GENIC homozygous 58796394 2 46519210 46519211 T C 35 GENIC homozygous 58796395 2 46519775 46519776 A - 12 GENIC heterozygous 58796396 2 46520209 46520210 T G 23 GENIC heterozygous 58796397 2 46520213 46520214 G GT 12 GENIC heterozygous 58796398 2 46520213 46520214 G GTTT 12 GENIC heterozygous 58796399 2 46520213 46520214 G GTT 12 GENIC heterozygous 58796400 2 46521925 46521926 C CT 11 GENIC heterozygous 58796401 2 46521926 46521927 T - 11 GENIC heterozygous 58796402 2 46522091 46522092 T C 30 GENIC possibly homozygous 58796403 2 46522170 46522171 T C 25 GENIC heterozygous 58796404 2 46522766 46522767 A T 80 GENIC heterozygous 58796405 2 46523761 46523762 T A 35 GENIC homozygous 58796406 2 46524046 46524047 C A 32 GENIC homozygous 58796407 2 46524455 46524456 C T 36 GENIC homozygous 58796408 2 46524457 46524458 A G 37 GENIC homozygous 58796409 2 46525114 46525115 A G 40 GENIC heterozygous 58796412 2 46524737 46524738 C A 36 GENIC possibly homozygous 58796410 2 46525094 46525095 A G 42 GENIC heterozygous 58796411 2 46525474 46525475 G GA 20 GENIC homozygous 58796413 2 46526506 46526507 G A 38 GENIC homozygous 58796414 2 46527174 46527175 A G 43 GENIC homozygous 58796415 2 46527514 46527515 T TC 25 GENIC possibly homozygous 58796416 2 46527903 46527904 T C 8 GENIC heterozygous 58796417 2 46527907 46527908 T C 8 GENIC heterozygous 58796418 2 46527911 46527912 T C 8 GENIC heterozygous 58796419 2 46527915 46527916 T C 8 GENIC heterozygous 58796420 2 46528135 46528136 A T 6 GENIC homozygous 58796421 2 46530293 46530294 G A 51 GENIC homozygous 58796422 2 46530926 46530927 T G 18 GENIC homozygous 58796423 2 46532162 46532163 A G 50 GENIC homozygous 58796424 2 46533437 46533438 T C 52 GENIC possibly homozygous 58796425 2 46533901 46533905 TTTG ---- 25 GENIC homozygous 58796426 2 46534027 46534028 C A 22 GENIC homozygous 58796427 2 46534664 46534665 A G 17 GENIC homozygous 58796428 2 46535166 46535167 T G 16 GENIC possibly homozygous 58796429 2 46535189 46535197 TTTTTTTT -------- 7 GENIC homozygous 58796430 2 46535718 46535720 GA -- 27 GENIC heterozygous 58796431 2 46535726 46535727 G - 19 GENIC heterozygous 58796432 2 46535726 46535727 G GTGT 18 GENIC homozygous 58796433 2 46538603 46538604 G A 46 GENIC possibly homozygous 58796434 2 46539161 46539162 T C 54 GENIC homozygous 58796435 2 46539283 46539284 G C 50 GENIC homozygous 58796436 2 46539555 46539556 T TAA 20 GENIC homozygous 58796437 2 46540756 46540757 A G 26 GENIC homozygous 58796438 2 46541714 46541715 C G 33 GENIC homozygous 58796439 2 46542301 46542302 A G 30 GENIC possibly homozygous 58796440 2 46542308 46542309 C T 29 GENIC possibly homozygous 58796441 2 46542311 46542312 T C 31 GENIC possibly homozygous 58796442 2 46542312 46542313 T G 32 GENIC possibly homozygous 58796443 2 46542320 46542321 A T 36 GENIC possibly homozygous 58796444 2 46543813 46543814 C T 31 GENIC homozygous 58796445 2 46546261 46546262 G A 38 GENIC possibly homozygous 58796446 2 46546453 46546454 T TC 60 GENIC homozygous 58796447 2 46546789 46546792 CCC --- 1 GENIC homozygous 58796448 2 46548656 46548657 G T 35 GENIC heterozygous 58796449 2 46549438 46549439 C A 27 GENIC possibly homozygous 58796450 2 46549463 46549464 C A 15 GENIC heterozygous 58796451 2 46549498 46549499 A C 10 GENIC heterozygous 58796452 2 46549528 46549529 A C 9 GENIC heterozygous 58796453 2 46550515 46550516 A G 42 GENIC homozygous 58796454 2 46550672 46550673 G T 51 GENIC homozygous 58796455 2 46550673 46550674 C T 51 GENIC homozygous 58796456 2 46552439 46552440 A G 34 GENIC homozygous 58796457 2 46553365 46553366 A G 19 GENIC homozygous 58796458 2 46554646 46554647 A G 50 GENIC homozygous 58796459 2 46555513 46555514 T - 33 GENIC homozygous 58796460 2 46555811 46555829 GTGTGTGTGTGTGTGTGT ------------------ 4 GENIC heterozygous 58796461 2 46557448 46557449 G A 40 GENIC homozygous 58796462 2 46557541 46557543 AA -- 22 GENIC heterozygous 58796463 2 46557542 46557543 A - 22 GENIC heterozygous 58796464 2 46563612 46563613 T C 36 GENIC homozygous 58796471 2 46557548 46557549 A C 31 GENIC heterozygous 58796465 2 46561811 46561812 C CG 32 GENIC homozygous 58796466 2 46561815 46561816 G GA 19 GENIC heterozygous 58796467 2 46562086 46562087 G A 16 GENIC homozygous 58796468 2 46562087 46562088 C CCA 16 GENIC homozygous 58796469 2 46562713 46562715 TA -- 13 GENIC homozygous 58796470 2 46566354 46566355 C CA 24 GENIC homozygous 58796472 2 46566366 46566367 C - 3 GENIC homozygous 58796473 2 46566378 46566379 C G 31 GENIC possibly homozygous 58796474 2 46566379 46566380 C T 23 GENIC possibly homozygous 58796475 2 46566842 46566843 A T 54 GENIC homozygous 58796476 2 46566973 46566974 A G 33 GENIC homozygous 58796477 2 46567118 46567122 TTTT ---- 14 GENIC heterozygous 58796478 2 46567119 46567122 TTT --- 14 GENIC heterozygous 58796479 2 46567165 46567166 A G 35 GENIC possibly homozygous 58796480 2 46567587 46567588 C T 20 GENIC heterozygous 58796481 2 46569335 46569336 T TGAGAGA 16 GENIC homozygous 58796482 2 46570058 46570060 TT -- 6 GENIC heterozygous 58796483 2 46570059 46570060 T - 6 GENIC heterozygous 58796484 2 46570984 46570985 A AT 5 GENIC heterozygous 58796485 2 46570985 46570986 A T 7 GENIC heterozygous 58796486 2 46570985 46570986 A ATATAT 4 GENIC heterozygous 58796487 2 46572870 46572871 C T 43 GENIC possibly homozygous 58796488 2 46573375 46573376 T TTTTGTTTGTTTGTTTG 6 GENIC homozygous 58796489 2 46575835 46575836 A AT 15 GENIC possibly homozygous 58796490 2 46577776 46577777 A G 37 GENIC homozygous 58796491 2 46579471 46579472 A G 61 GENIC homozygous 58796492 2 46579648 46579649 A T 33 GENIC homozygous 58796493 2 46581861 46581862 A G 54 GENIC homozygous 58796494 2 46582138 46582139 G T 51 GENIC homozygous 58796495