chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54462678 54462679 C A 23 GENIC homozygous 46164750 19 54464636 54464637 C G 17 GENIC homozygous 46164751 19 54465787 54465788 G GGTGTGTGTGTGT 8 GENIC homozygous 46410252 19 54465822 54465824 GT -- 11 GENIC homozygous 46410254 19 54465989 54465990 T C 26 GENIC homozygous 46164754 19 54468206 54468207 A G 17 GENIC homozygous 46164755 19 54468380 54468381 G GAAAA 15 GENIC heterozygous 46410256 19 54469284 54469285 G A 20 GENIC homozygous 46164758 19 54469482 54469483 G A 29 GENIC homozygous 46164759 19 54469785 54469786 T C 20 GENIC homozygous 46164760 19 54471232 54471233 A C 23 GENIC homozygous 46164761 19 54471457 54471458 C G 12 GENIC homozygous 46164762 19 54471471 54471472 C G 9 GENIC homozygous 46164763 19 54471474 54471475 A AG 9 GENIC homozygous 46164764 19 54472892 54472893 C CT 20 GENIC homozygous 46164765 19 54473181 54473182 C T 15 GENIC homozygous 46164766 19 54473870 54473871 G A 27 GENIC homozygous 46164767 19 54474375 54474379 AAAC ---- 12 GENIC homozygous 46164769 19 54475177 54475178 T C 22 GENIC homozygous 46164770 19 54475180 54475181 T TTG 10 GENIC possibly homozygous 46164771 19 54466096 54466100 TCTC ---- 21 GENIC homozygous 46263088 19 54473759 54473760 A - 17 GENIC possibly homozygous 46213827 19 54470041 54470055 GAGAGAGAGCGAGC -------------- 3 GENIC heterozygous 46464038 19 54471371 54471372 A AAG 3 GENIC homozygous 46464040 19 54475996 54475997 C CGT 15 GENIC homozygous 46164772 19 54476957 54476958 C A 21 GENIC homozygous 46164773 19 54478511 54478512 A G 14 GENIC homozygous 46164774 19 54478984 54478985 T C 20 GENIC homozygous 46164775 19 54479382 54479383 A AG 31 GENIC homozygous 46164776 19 54479863 54479864 T G 22 GENIC homozygous 46164777 19 54480156 54480157 T TCATTTA 18 GENIC homozygous 46164778 19 54480240 54480241 C CA 22 GENIC homozygous 46164779 19 54481088 54481089 C T 27 GENIC homozygous 46164780 19 54481626 54481627 C T 22 GENIC homozygous 46164781 19 54481815 54481816 A - 10 GENIC homozygous 46213830 19 54481989 54481990 T A 26 GENIC homozygous 46164782 19 54483413 54483414 T C 24 GENIC homozygous 46164785 19 54482103 54482104 C T 21 GENIC homozygous 46263090 19 54482791 54482792 A G 13 GENIC homozygous 46164783 19 54482806 54482807 T C 11 GENIC homozygous 46164784 19 54483485 54483486 G A 19 GENIC homozygous 46164786 19 54483705 54483706 C T 27 GENIC homozygous 46164787 19 54485427 54485428 T C 26 GENIC homozygous 46164788 19 54486002 54486003 T - 11 GENIC homozygous 46164789 19 54486113 54486114 T G 9 GENIC homozygous 46164790 19 54486121 54486122 C CT 9 GENIC possibly homozygous 46164791 19 54486467 54486468 C A 18 GENIC homozygous 46164793 19 54486510 54486511 G GA 10 GENIC possibly homozygous 46164794 19 54486668 54486669 T G 20 GENIC homozygous 46164795 19 54486736 54486737 C T 13 GENIC homozygous 46164796 19 54486829 54486830 G A 19 GENIC homozygous 46164797 19 54486948 54486949 A C 14 GENIC homozygous 46164798 19 54487487 54487488 G T 15 GENIC homozygous 46164799 19 54487501 54487502 C T 12 GENIC homozygous 46164800 19 54487507 54487508 C A 13 GENIC homozygous 46164801 19 54487595 54487596 G A 17 GENIC homozygous 46164802 19 54488039 54488040 T C 15 GENIC homozygous 46164803 19 54488051 54488052 T C 16 GENIC homozygous 46164804 19 54488297 54488317 TCTCACCAGACCACCACTGC -------------------- 8 GENIC homozygous 46410262 19 54488400 54488401 C T 16 GENIC homozygous 46164805 19 54488572 54488573 G T 25 GENIC homozygous 46164806 19 54488778 54488782 CGCG ---- 8 GENIC possibly homozygous 46464042 19 54488785 54488786 G A 11 GENIC homozygous 46164808 19 54488816 54488817 C CATAT 9 GENIC heterozygous 46464044 19 54489044 54489045 A G 19 GENIC homozygous 46164811 19 54489431 54489432 G A 16 GENIC homozygous 46164812 19 54490308 54490309 A G 27 GENIC homozygous 46164813 19 54490389 54490390 C A 25 GENIC homozygous 46164814 19 54490407 54490408 C T 24 GENIC homozygous 46164815 19 54490499 54490500 A - 15 GENIC homozygous 46164816 19 54490546 54490547 T TCA 17 GENIC homozygous 46164817 19 54490803 54490804 T A 18 GENIC homozygous 46164818 19 54491326 54491327 T TA 21 GENIC homozygous 46164819 19 54491453 54491454 C T 19 GENIC homozygous 46164820 19 54491523 54491524 T - 27 GENIC homozygous 46164821 19 54491598 54491599 T G 20 GENIC homozygous 46164822 19 54491649 54491650 G A 22 GENIC homozygous 46164823 19 54491745 54491746 T C 15 GENIC homozygous 46164824 19 54491752 54491753 T C 16 GENIC homozygous 46164825 19 54492197 54492198 C T 23 GENIC homozygous 46164826 19 54492410 54492411 C G 17 GENIC homozygous 46164827 19 54492478 54492479 T C 24 GENIC homozygous 46164828 19 54492718 54492719 C T 30 GENIC homozygous 46164829 19 54493063 54493064 T G 23 GENIC homozygous 46164830 19 54493081 54493082 T C 21 GENIC homozygous 46164831 19 54493121 54493130 AGAGGAGAT --------- 2 GENIC homozygous 46464046 19 54493244 54493245 C G 24 GENIC homozygous 46164834 19 54493802 54493803 G A 16 GENIC homozygous 46164835 19 54494211 54494212 G A 23 GENIC homozygous 46164836 19 54494214 54494215 C T 23 GENIC homozygous 46164837 19 54494297 54494298 T C 16 GENIC homozygous 46164838 19 54494385 54494389 GCTA ---- 20 GENIC homozygous 46164839 19 54494897 54494898 T G 23 GENIC homozygous 46164840 19 54495070 54495071 A C 18 GENIC homozygous 46263092 19 54495499 54495500 C A 14 GENIC homozygous 46164841 19 54495537 54495538 G C 22 GENIC homozygous 46164842 19 54496026 54496027 G A 22 GENIC homozygous 46164843 19 54496444 54496445 A T 31 GENIC homozygous 46164844 19 54496655 54496656 G A 19 GENIC homozygous 46164845 19 54497120 54497121 G GGAGGAA 6 GENIC heterozygous 46464048 19 54497407 54497408 G A 23 GENIC homozygous 46164847 19 54497659 54497660 A G 22 GENIC homozygous 46164848 19 54497737 54497738 C T 17 GENIC homozygous 46164849 19 54497979 54497980 C A 16 GENIC homozygous 46164850 19 54498652 54498653 G T 25 GENIC homozygous 46164851 19 54499892 54499893 A G 25 GENIC homozygous 46164852 19 54500705 54500706 T C 16 GENIC homozygous 46164853 19 54500932 54500933 T TGTGTGTGTGTGTGTGTGTGCGTGCGTGC 2 GENIC heterozygous 46464050 19 54500993 54500994 T C 11 GENIC homozygous 46164855 19 54500996 54500997 C T 11 GENIC homozygous 46164856 19 54501067 54501068 T A 13 GENIC homozygous 46164857 19 54501877 54501878 C T 27 GENIC homozygous 46164859 19 54502284 54502285 A ATT 20 GENIC homozygous 46164860 19 54503255 54503256 T C 22 GENIC homozygous 46164861 19 54503604 54503605 T C 23 GENIC homozygous 46164862 19 54504113 54504114 C T 28 GENIC homozygous 46164863 19 54504213 54504214 T C 23 GENIC homozygous 46164864 19 54505338 54505346 ACACACAC -------- 17 GENIC homozygous 46164865 19 54506429 54506430 T C 27 GENIC homozygous 46164866 19 54506985 54506986 A G 19 GENIC homozygous 46164867 19 54507162 54507163 A G 21 GENIC homozygous 46164868 19 54497114 54497115 G GGAAGAA 5 GENIC heterozygous 46534594 19 54507271 54507272 T C 28 GENIC possibly homozygous 46164870 19 54507275 54507276 T G 35 GENIC homozygous 46164871 19 54507561 54507562 A AT 20 GENIC homozygous 46164872 19 54507590 54507591 A - 21 GENIC homozygous 46164873 19 54507613 54507614 G - 20 GENIC homozygous 46164874 19 54507659 54507660 A AT 15 GENIC homozygous 46164875 19 54507758 54507759 C CAG 10 GENIC homozygous 46164876 19 54507847 54507848 A ACACACACACACACACACACACACACACACACACACACACAC 3 GENIC heterozygous 46410268 19 54508151 54508152 A G 18 GENIC homozygous 46164877 19 54508796 54508797 G T 16 GENIC homozygous 46164878 19 54508798 54508799 G T 16 GENIC homozygous 46164879 19 54508799 54508800 G T 16 GENIC homozygous 46164880 19 54508801 54508802 A AAC 5 GENIC heterozygous 46410270 19 54509088 54509089 A G 25 GENIC homozygous 46164881 19 54509335 54509336 A G 19 GENIC homozygous 46164883 19 54513208 54513219 ACACACACACT ----------- 5 GENIC homozygous 46464052 19 54513240 54513253 ACACACACACACT ------------- 5 GENIC heterozygous 46464054 19 54513308 54513309 A ACACT 4 GENIC homozygous 46164888 19 54513425 54513471 ACACACTACACACACACACTCACTACACACTACACACACACACTAG ---------------------------------------------- 3 GENIC homozygous 46410272 19 54513537 54513539 AC -- 17 GENIC homozygous 46164901 19 54514298 54514302 CTTA ---- 17 GENIC homozygous 46164902 19 54514340 54514341 T G 24 GENIC homozygous 46263098 19 54515151 54515152 A AAAAACAAACAAACCTGATTC 21 GENIC homozygous 46164906 19 54515417 54515423 AAAAAA ------ 16 GENIC heterozygous 46464056 19 54515468 54515469 A G 13 GENIC homozygous 46164909 19 54515552 54515554 AA -- 11 GENIC possibly homozygous 46213834 19 54515553 54515554 A - 11 GENIC heterozygous 46164910 19 54516457 54516458 A G 23 GENIC homozygous 46263099 19 54516950 54516951 A G 17 GENIC homozygous 46263100 19 54517707 54517715 CCTCTCTC -------- 3 GENIC homozygous 46534599 19 54517749 54517750 G GCA 9 GENIC homozygous 46164911 19 54517796 54517797 A AT 20 GENIC homozygous 46164912 19 54518158 54518159 G GT 17 GENIC heterozygous 46164914 19 54521685 54521687 AA -- 12 GENIC heterozygous 46213835 19 54521686 54521687 A - 12 GENIC heterozygous 46164924 19 54522246 54522247 T C 17 GENIC homozygous 46263102 19 54522263 54522264 A AGT 9 GENIC heterozygous 46164926 19 54522263 54522264 A AGTGT 9 GENIC heterozygous 46263103 19 54522475 54522476 T - 18 GENIC homozygous 46263104 19 54518159 54518160 T - 17 GENIC heterozygous 46657631