chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 29594011 29594012 T TAC 4 INTERGENIC heterozygous 46531880 19 29613002 29613003 T - 16 INTERGENIC homozygous 46090161 19 29613008 29613009 T - 6 INTERGENIC homozygous 46090162 19 29613010 29613011 T - 6 INTERGENIC homozygous 46090163 19 29613015 29613016 T - 14 INTERGENIC homozygous 46090164 19 29613021 29613022 T - 16 INTERGENIC homozygous 46090165 19 29613025 29613026 T - 14 INTERGENIC homozygous 46090166 19 29613029 29613030 G - 13 INTERGENIC homozygous 46090167 19 29613034 29613035 T - 14 INTERGENIC homozygous 46090168 19 29613038 29613043 TATCT ----- 16 INTERGENIC homozygous 46090169 19 29613048 29613049 T - 18 INTERGENIC homozygous 46090170 19 29613051 29613052 T - 20 INTERGENIC homozygous 46401834 19 29613053 29613055 TT -- 21 INTERGENIC homozygous 46401836 19 29613056 29613057 T - 22 INTERGENIC homozygous 46090171 19 29613059 29613060 T - 23 INTERGENIC homozygous 46090172 19 29613073 29613074 T - 27 INTERGENIC homozygous 46090173 19 29613090 29613091 T - 32 INTERGENIC homozygous 46090174 19 29613099 29613100 T - 39 INTERGENIC homozygous 46090175 19 29615201 29615202 A AT 29 INTERGENIC homozygous 46090176 19 29619915 29619917 TG -- 13 INTERGENIC heterozygous 46401838 19 29630664 29630665 A AAC 11 INTERGENIC heterozygous 46429247 19 29630667 29630669 AC -- 11 INTERGENIC heterozygous 46401841 19 29634887 29634889 GT -- 24 INTERGENIC heterozygous 46401843 19 29638118 29638119 G GCC 34 INTERGENIC homozygous 46090178 19 29651838 29651839 A ATTTGTAAGTTGAACAGCTTGCTGTAGAGGAATCTGAGAGCAGAGGAGCAAGACCATTCCCAGAAACAAAGAGAAGTTACCATTACCGAGAATTAACAAACTCGTGAAACCTAGATGGATTT 40 INTERGENIC possibly homozygous 46401845 19 29652539 29652540 G GGT 10 INTERGENIC heterozygous 46401847 19 29652542 29652544 GT -- 10 INTERGENIC heterozygous 46401849 19 29666170 29666171 A - 21 INTERGENIC heterozygous 46401853 19 29680295 29680297 AC -- 25 INTERGENIC heterozygous 46401857 19 29690753 29690758 CTTTT ----- 14 INTERGENIC homozygous 46429251 19 29702179 29702180 C CGTGT 3 GENIC homozygous 46090182 19 29717612 29717613 G GA 9 INTERGENIC homozygous 46090184 19 29733070 29733082 AGAAGAAGAAGA ------------ 2 INTERGENIC homozygous 46401861 19 29736947 29736948 G GGA 2 INTERGENIC heterozygous 46531894 19 29736950 29736952 GA -- 2 INTERGENIC heterozygous 46401863 19 29753564 29753565 A AAGAT 8 INTERGENIC homozygous 46090187 19 29753845 29753847 CA -- 28 INTERGENIC heterozygous 46401867 19 29761881 29761883 TG -- 9 INTERGENIC heterozygous 46326722 19 29765460 29765461 A G 24 INTERGENIC homozygous 46090189 19 29780312 29780314 GT -- 5 INTERGENIC heterozygous 46271515 19 29780444 29780445 T TC 34 INTERGENIC homozygous 46090190 19 29783209 29783211 GT -- 25 INTERGENIC heterozygous 46444757 19 29795470 29795471 G - 1 INTERGENIC homozygous 46556315 19 29795587 29795588 T TTG 4 INTERGENIC heterozygous 46429265 19 29795604 29795606 TG -- 4 INTERGENIC heterozygous 46459473 19 29798338 29798340 TC -- 4 INTERGENIC heterozygous 46429267 19 29806088 29806089 G - 22 INTERGENIC heterozygous 46564343 19 29647703 29647706 TTA --- 12 INTERGENIC heterozygous 46583092 19 29806881 29806883 TG -- 5 INTERGENIC heterozygous 46401869 19 29823412 29823413 T TTAA 4 INTERGENIC heterozygous 46401873 19 29833071 29833072 C G 1 INTERGENIC homozygous 46271516 19 29834175 29834177 CA -- 6 INTERGENIC heterozygous 46209276 19 29841250 29841252 CA -- 7 INTERGENIC heterozygous 46429274 19 29842943 29842944 T C 34 INTERGENIC homozygous 46090196 19 29846373 29846375 CT -- 8 INTERGENIC heterozygous 46459475 19 29860836 29860838 GT -- 20 INTERGENIC heterozygous 46429277 19 29862093 29862094 C T 31 INTERGENIC homozygous 46090197 19 29862095 29862096 C T 31 INTERGENIC homozygous 46090198 19 29862100 29862101 G GCA 12 INTERGENIC heterozygous 46444761 19 29862105 29862107 CA -- 12 INTERGENIC heterozygous 46401877 19 29876174 29876175 C - 13 INTERGENIC homozygous 46090201 19 29876175 29876176 C A 12 INTERGENIC homozygous 46401881 19 29876177 29876178 C A 11 INTERGENIC homozygous 46401883 19 29876193 29876194 C - 13 INTERGENIC homozygous 46090202 19 29876201 29876202 C A 13 INTERGENIC homozygous 46090203 19 29876202 29876203 C A 14 INTERGENIC homozygous 46090204 19 29876204 29876207 CCT --- 15 INTERGENIC homozygous 46090205 19 29876233 29876234 C CA 22 INTERGENIC homozygous 46090206 19 29876237 29876238 C - 23 INTERGENIC homozygous 46090207 19 29876247 29876248 T A 24 INTERGENIC homozygous 46090208 19 29876254 29876255 C CA 23 INTERGENIC homozygous 46090209 19 29876259 29876260 C A 26 INTERGENIC homozygous 46090211 19 29876262 29876265 CCT --- 28 INTERGENIC homozygous 46401885 19 29876265 29876266 C CAA 29 INTERGENIC homozygous 46401887 19 29876275 29876276 T TA 32 INTERGENIC homozygous 46090213 19 29876283 29876284 C - 35 INTERGENIC homozygous 46090214 19 29876292 29876293 C CT 37 INTERGENIC homozygous 46090215 19 29876316 29876317 T TG 31 INTERGENIC homozygous 46090216 19 29895916 29895917 G C 26 INTERGENIC homozygous 46090227 19 29895927 29895928 T G 30 INTERGENIC homozygous 46090228 19 29895939 29895940 G C 36 INTERGENIC homozygous 46090229 19 29895965 29895966 A ATATATATATATGTATGTATGTATGTATGTATGTATGTATG 18 INTERGENIC heterozygous 46429281 19 29896013 29896015 AG -- 5 INTERGENIC heterozygous 46090233 19 29907710 29907711 A T 22 INTERGENIC homozygous 46090238 19 29936604 29936605 G GGGCTGGAGAGATGGCTCAGTGGTTAAGAACACCCGACTGTTCTTCCAGAGGT 12 INTERGENIC homozygous 46401889 19 29938997 29938998 C G 23 INTERGENIC homozygous 46090246 19 29940520 29940521 C A 8 INTERGENIC homozygous 46090247 19 29940643 29940644 T C 12 INTERGENIC homozygous 46090248 19 29968318 29968319 T G 31 INTERGENIC homozygous 46090252 19 29978912 29978913 A G 31 INTERGENIC homozygous 46090254 19 29978986 29978987 G C 32 INTERGENIC homozygous 46090255 19 29978999 29979000 T C 33 INTERGENIC homozygous 46090256 19 29979578 29979579 A ACTGTTTCATTAGGCC 20 INTERGENIC homozygous 46090257 19 29979983 29979984 T - 4 INTERGENIC homozygous 46519805 19 29981845 29981846 T TAAGA 23 INTERGENIC heterozygous 46090264 19 29981846 29981850 AAGA ---- 23 INTERGENIC heterozygous 46090265 19 29981853 29981854 A AAAGAAAGG 29 INTERGENIC heterozygous 46379536 19 29982420 29982421 T TCTAAAG 3 INTERGENIC heterozygous 46401891 19 29993278 29993279 A AG 1 INTERGENIC homozygous 46090280 19 29994346 29994347 C CT 17 INTERGENIC heterozygous 46090287 19 29994347 29994352 TTTTT ----- 17 INTERGENIC heterozygous 46444769 19 29994530 29994531 C CCCAAA 9 INTERGENIC homozygous 46090290 19 29999486 29999487 T - 5 INTERGENIC homozygous 46090297 19 30000868 30000869 T - 6 INTERGENIC heterozygous 46239228 19 30015144 30015145 A ACC 49 INTERGENIC heterozygous 46519812 19 30015144 30015145 A ACT 49 INTERGENIC heterozygous 46618602 19 30015497 30015498 C CTT 11 INTERGENIC heterozygous 46401899 19 30015516 30015517 T - 18 INTERGENIC heterozygous 46564350 19 30015527 30015529 TA -- 24 INTERGENIC heterozygous 46634807 19 29833065 29833066 G GAGGGAGGA 1 INTERGENIC homozygous 46507525 19 29841241 29841242 G GCA 7 INTERGENIC heterozygous 46634804 19 29898515 29898519 AGAA ---- 14 INTERGENIC homozygous 46634805 19 29999029 29999030 A ATG 5 INTERGENIC homozygous 46634806 19 30019004 30019005 T - 1 INTERGENIC homozygous 46564352 19 30042417 30042418 C A 1 INTERGENIC homozygous 46090350 19 30042429 30042430 G C 2 INTERGENIC homozygous 46090352 19 30042505 30042506 G A 11 INTERGENIC homozygous 46090353 19 30042612 30042613 A AACATCAATTTACTTTGCAAAACACTAGCTGTGTGTTTAAT 6 INTERGENIC heterozygous 46429291 19 30048323 30048325 GT -- 24 INTERGENIC heterozygous 46401903 19 30048508 30048510 TG -- 22 INTERGENIC heterozygous 46090359 19 30065796 30065798 TC -- 5 INTERGENIC heterozygous 46583099 19 30074222 30074223 G GA 30 INTERGENIC homozygous 46090362 19 30095020 30095021 G GA 7 INTERGENIC heterozygous 46401905 19 30095023 30095024 A - 7 INTERGENIC heterozygous 46401907 19 30095550 30095552 AC -- 30 INTERGENIC heterozygous 46090364 19 30097075 30097079 ACAT ---- 17 INTERGENIC homozygous 46090365 19 30104416 30104417 G - 11 INTERGENIC heterozygous 46379540 19 30104843 30104845 TG -- 3 INTERGENIC heterozygous 46401909 19 30108307 30108308 G - 6 INTERGENIC heterozygous 46634808 19 30108481 30108482 A - 28 INTERGENIC homozygous 46090369 19 30108484 30108485 A - 28 INTERGENIC homozygous 46090370 19 30108529 30108530 T TTG 20 INTERGENIC homozygous 46090371 19 30109304 30109305 C CGATA 10 INTERGENIC possibly homozygous 46459481 19 30110829 30110830 T TCCCCTCTCCCTCCCCCTCCC 5 INTERGENIC homozygous 46379542 19 30112738 30112739 A AG 2 INTERGENIC homozygous 46090375 19 30116209 30116210 T TC 21 INTERGENIC homozygous 46090376 19 30116211 30116212 C CA 21 INTERGENIC homozygous 46090377 19 30128664 30128665 C CTG 4 INTERGENIC heterozygous 46239436 19 30137551 30137552 A C 5 INTERGENIC homozygous 46239499 19 30137561 30137562 A C 3 INTERGENIC homozygous 46239500 19 30137566 30137567 A C 3 INTERGENIC homozygous 46090379 19 30137574 30137575 G C 5 INTERGENIC homozygous 46090380 19 30137579 30137580 A C 5 INTERGENIC homozygous 46090381 19 30137583 30137584 A C 7 INTERGENIC homozygous 46090382 19 30137599 30137600 A T 10 INTERGENIC homozygous 46090386 19 30137587 30137588 G T 8 INTERGENIC homozygous 46090383 19 30137590 30137591 A T 7 INTERGENIC homozygous 46090384 19 30137593 30137594 A C 7 INTERGENIC homozygous 46090385 19 30137601 30137602 A C 11 INTERGENIC homozygous 46239501 19 30137602 30137603 A C 12 INTERGENIC homozygous 46239502 19 30137605 30137606 A T 15 INTERGENIC homozygous 46090387 19 30137608 30137609 G C 15 INTERGENIC homozygous 46090388 19 30137610 30137611 G C 15 INTERGENIC homozygous 46090389 19 30137616 30137620 AAAA ---- 18 INTERGENIC homozygous 46401915 19 30137619 30137620 A ATTCT 18 INTERGENIC homozygous 46401917 19 30137623 30137624 A T 18 INTERGENIC homozygous 46401919 19 30137629 30137630 G C 18 INTERGENIC homozygous 46090390 19 30137630 30137631 A C 18 INTERGENIC homozygous 46090391 19 30137632 30137633 A C 18 INTERGENIC homozygous 46090392 19 30137635 30137636 A T 18 INTERGENIC homozygous 46090393 19 30137638 30137639 A C 18 INTERGENIC homozygous 46090394 19 30158402 30158403 T TGGCTGGAGAGCCCATGACCTCTGTCCCTGGCTCGCAAAACCTTATGCTGCATCTCATCTCCTAGTAGCCCTGGGAA 15 INTERGENIC homozygous 46401921 19 30160996 30160997 C CA 17 INTERGENIC heterozygous 46401923 19 30160997 30160998 A - 17 INTERGENIC heterozygous 46090399 19 30163842 30163850 AGATAGAT -------- 11 INTERGENIC heterozygous 46459486 19 30163846 30163850 AGAT ---- 11 INTERGENIC possibly homozygous 46401925 19 30163990 30163994 TAGA ---- 14 INTERGENIC homozygous 46401927 19 30164423 30164424 T TAC 9 INTERGENIC homozygous 46090401 19 30172113 30172115 GT -- 13 INTERGENIC heterozygous 46090403 19 30189096 30189098 GG -- 13 INTERGENIC heterozygous 46090411 19 30189097 30189098 G - 13 INTERGENIC heterozygous 46090412 19 30189787 30189789 AC -- 12 INTERGENIC heterozygous 46401931 19 30197347 30197349 TC -- 3 INTERGENIC heterozygous 46401935 19 30197588 30197589 G GCACA 4 INTERGENIC homozygous 46090413 19 30199083 30199086 CAC --- 6 INTERGENIC heterozygous 46209310 19 30211488 30211493 GGTTC ----- 20 INTERGENIC heterozygous 46429300 19 30227044 30227045 A ATG 8 INTERGENIC homozygous 46634809 19 30232069 30232071 AC -- 19 INTERGENIC homozygous 46209313 19 30235821 30235822 T TGG 35 INTERGENIC homozygous 46090421 19 30237151 30237153 CA -- 23 INTERGENIC heterozygous 46401942 19 30241616 30241618 GA -- 13 INTERGENIC heterozygous 46444780 19 30241731 30241732 A AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATACTGTCAGACAGACAGATGATATATGGATGAAAGACAGAATGATAAATATAGAT 22 INTERGENIC heterozygous 46401946 19 30241905 30241906 A ATAGATG 15 INTERGENIC heterozygous 46583107 19 30242325 30242327 GT -- 13 INTERGENIC heterozygous 46429302 19 30242946 30242947 T TAC 16 INTERGENIC heterozygous 46090424 19 30242947 30242949 AC -- 16 INTERGENIC heterozygous 46401948 19 30251176 30251177 T TA 32 INTERGENIC homozygous 46090425 19 30252661 30252662 G GAC 7 INTERGENIC heterozygous 46401950 19 30252662 30252664 AC -- 7 INTERGENIC heterozygous 46401952 19 30262718 30262720 CC -- 6 INTERGENIC heterozygous 46401954 19 30262719 30262720 C - 6 INTERGENIC heterozygous 46090426 19 30265650 30265651 G - 26 INTERGENIC homozygous 46090427 19 30265654 30265655 G A 27 INTERGENIC homozygous 46090428 19 30265655 30265656 G A 26 INTERGENIC homozygous 46090429 19 30265656 30265657 G C 26 INTERGENIC homozygous 46090430 19 30270391 30270392 G C 28 INTERGENIC homozygous 46090431 19 30270394 30270395 A T 27 INTERGENIC homozygous 46090432 19 30271798 30271800 AC -- 22 INTERGENIC heterozygous 46429304 19 30273522 30273524 TG -- 7 INTERGENIC heterozygous 46429307 19 30276795 30276796 A - 24 INTERGENIC homozygous 46090438 19 30280504 30280506 GT -- 15 INTERGENIC heterozygous 46401956 19 30290280 30290281 C CTT 3 INTERGENIC heterozygous 46090439 19 30301630 30301633 AAT --- 4 GENIC heterozygous 46401960 19 30305433 30305435 TC -- 2 GENIC homozygous 46090442 19 30305845 30305847 GA -- 18 GENIC homozygous 46209320 19 30306176 30306177 G GA 4 GENIC homozygous 46090443 19 30310804 30310805 A - 8 GENIC heterozygous 46429312 19 30314952 30314953 C - 6 GENIC homozygous 46090458 19 30322075 30322076 G GTGTGTGTGTGTGTGTGTGTGTGTGTATTCATACGTACACACACACACACATATGACTTCCCAAGAACTTATCTAATAAA 3 GENIC heterozygous 46401962 19 30322075 30322076 G GTGTGTGTGTGTGTGTGTGTGTGTATTCATACGTACACACACACACACATATGACTTCCCAAGAACTTATCTAATAAA 3 GENIC heterozygous 46429314 19 30340709 30340710 A ACAG 34 GENIC homozygous 46090464