chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 50872015 50872016 C - 3 INTERGENIC homozygous 46154952 19 50872017 50872018 C - 6 INTERGENIC homozygous 46154953 19 50872116 50872117 G GAGAGAGAGAGAGAGAGAGA 4 INTERGENIC homozygous 46408439 19 50872118 50872119 G GAAAGATTT 4 INTERGENIC homozygous 46408441 19 50872295 50872300 AAACA ----- 4 INTERGENIC homozygous 46408443 19 50872299 50872300 A ATTTGT 3 INTERGENIC homozygous 46408445 19 50877549 50877550 A AC 13 INTERGENIC heterozygous 46154959 19 50881357 50881359 GA -- 4 INTERGENIC heterozygous 46408451 19 50883861 50883862 A AAGAG 4 INTERGENIC heterozygous 46430953 19 50888798 50888801 GGG --- 19 INTERGENIC homozygous 46154979 19 50888803 50888805 TG -- 20 INTERGENIC homozygous 46154980 19 50888806 50888808 CA -- 18 INTERGENIC homozygous 46154981 19 50888810 50888811 A - 16 INTERGENIC homozygous 46154982 19 50888870 50888871 T TC 13 INTERGENIC homozygous 46154984 19 50891792 50891793 T TAAAA 9 INTERGENIC heterozygous 46408453 19 50893464 50893465 T TG 18 INTERGENIC homozygous 46154997 19 50896587 50896588 T TA 16 INTERGENIC heterozygous 46608914 19 50896889 50896891 AT -- 16 INTERGENIC heterozygous 46408457 19 50897407 50897408 T TTA 7 INTERGENIC heterozygous 46274658 19 50903378 50903382 CACA ---- 11 INTERGENIC heterozygous 46508623 19 50913213 50913214 G GT 24 INTERGENIC homozygous 46155045 19 50926031 50926037 AGAGAG ------ 5 INTERGENIC heterozygous 46430955 19 50926033 50926037 AGAG ---- 5 INTERGENIC heterozygous 46430957 19 50935718 50935719 G GT 30 INTERGENIC homozygous 46155081 19 50940405 50940407 TG -- 5 INTERGENIC heterozygous 46408472 19 50945723 50945725 AC -- 10 INTERGENIC heterozygous 46155101 19 50948958 50948959 C CA 2 INTERGENIC homozygous 46408476 19 50948961 50948962 C A 5 INTERGENIC homozygous 46408478 19 50948984 50948985 C G 4 INTERGENIC homozygous 46155105 19 50950083 50950084 T TTC 7 INTERGENIC heterozygous 46430961 19 50957512 50957513 C - 5 INTERGENIC heterozygous 46430963 19 50976896 50976897 C CT 3 INTERGENIC heterozygous 46430965 19 50978658 50978660 TG -- 3 INTERGENIC heterozygous 46408484 19 50984037 50984038 T - 9 INTERGENIC heterozygous 46260778 19 50998916 50998917 C CAGAG 3 INTERGENIC homozygous 46408486 19 51007319 51007321 CA -- 9 INTERGENIC heterozygous 46408488 19 51014227 51014228 A - 9 INTERGENIC heterozygous 46408494 19 51017157 51017159 CA -- 19 INTERGENIC heterozygous 46430969 19 51024790 51024791 A - 5 INTERGENIC heterozygous 46155220 19 51039561 51039563 AC -- 7 INTERGENIC heterozygous 46408504 19 51052094 51052096 GT -- 6 INTERGENIC heterozygous 46408506 19 51058513 51058514 A ACAG 6 INTERGENIC heterozygous 46608916 19 51080528 51080530 TA -- 12 INTERGENIC heterozygous 46408510 19 51085412 51085414 TA -- 8 INTERGENIC heterozygous 46260783 19 51087604 51087605 C - 35 INTERGENIC homozygous 46155481 19 51100790 51100792 TG -- 7 INTERGENIC heterozygous 46408514 19 51110211 51110212 A - 16 INTERGENIC heterozygous 46155542 19 51112628 51112629 T TCA 2 INTERGENIC heterozygous 46408518 19 51131782 51131783 T - 9 INTERGENIC heterozygous 46446131 19 51136956 51136957 T - 10 INTERGENIC heterozygous 46430977 19 51152139 51152141 AC -- 6 INTERGENIC heterozygous 46430979 19 51153483 51153484 T TGA 7 INTERGENIC heterozygous 46446133 19 51153486 51153488 GA -- 7 INTERGENIC heterozygous 46408528 19 51170571 51170573 GT -- 8 INTERGENIC heterozygous 46430981 19 51190984 51190986 CA -- 8 INTERGENIC heterozygous 46260788 19 51204386 51204388 GT -- 6 INTERGENIC heterozygous 46446137 19 51218484 51218485 A C 25 INTERGENIC homozygous 46155803 19 51229061 51229062 C CATAT 1 INTERGENIC homozygous 46608918 19 51244493 51244494 G GA 16 INTERGENIC homozygous 46155815 19 51245526 51245528 CA -- 8 INTERGENIC heterozygous 46508639 19 51247527 51247533 CACACA ------ 10 INTERGENIC heterozygous 46430985 19 51247529 51247533 CACA ---- 10 INTERGENIC heterozygous 46408542 19 51247531 51247533 CA -- 10 INTERGENIC heterozygous 46408544 19 51251546 51251547 A AG 11 INTERGENIC heterozygous 46608920 19 51255155 51255157 AC -- 16 INTERGENIC heterozygous 46463221 19 51256868 51256869 C - 3 INTERGENIC heterozygous 46408546 19 51269869 51269871 AC -- 8 INTERGENIC heterozygous 46430991 19 51273567 51273568 C - 6 INTERGENIC heterozygous 46430995 19 51275934 51275935 A - 10 INTERGENIC heterozygous 46430999 19 51278783 51278784 T - 14 INTERGENIC heterozygous 46431001 19 51278827 51278828 T - 1 INTERGENIC homozygous 46431003 19 51282124 51282126 AC -- 20 INTERGENIC heterozygous 46408548 19 51287136 51287137 T C 20 INTERGENIC homozygous 46155832 19 51291382 51291384 TG -- 10 INTERGENIC heterozygous 46608922 19 51294528 51294530 GT -- 2 INTERGENIC heterozygous 46408552 19 51296613 51296615 CA -- 6 INTERGENIC heterozygous 46408554 19 51299428 51299430 CA -- 12 INTERGENIC heterozygous 46155855 19 51300036 51300037 A G 29 INTERGENIC possibly homozygous 46155858 19 51302267 51302268 G GA 18 INTERGENIC heterozygous 46508643 19 51302268 51302269 A - 18 INTERGENIC heterozygous 46155863 19 51303023 51303027 ATCT ---- 7 INTERGENIC homozygous 46508645 19 51304977 51304979 GT -- 6 INTERGENIC heterozygous 46408558 19 51320241 51320243 GT -- 13 INTERGENIC heterozygous 46408562 19 51340516 51340517 A AAAC 11 INTERGENIC heterozygous 46155935 19 51360408 51360409 C CA 18 INTERGENIC heterozygous 46156006 19 51376122 51376126 CTCT ---- 8 INTERGENIC heterozygous 46520520 19 51376124 51376126 CT -- 8 INTERGENIC heterozygous 46408572 19 51379411 51379415 CTCT ---- 5 INTERGENIC heterozygous 46431062 19 51391337 51391339 CT -- 7 INTERGENIC heterozygous 46463240 19 51391553 51391554 T TA 17 INTERGENIC homozygous 46156081 19 51391896 51391898 CA -- 9 INTERGENIC heterozygous 46408580 19 51401141 51401145 ACAC ---- 9 INTERGENIC heterozygous 46156105 19 51401143 51401145 AC -- 9 INTERGENIC heterozygous 46260797 19 51408392 51408394 TG -- 14 INTERGENIC heterozygous 46408582 19 51414034 51414035 G - 19 INTERGENIC homozygous 46156155 19 51414043 51414044 G - 22 INTERGENIC homozygous 46156156 19 51414226 51414227 C CA 31 INTERGENIC homozygous 46156158 19 51414314 51414315 T TTATC 4 INTERGENIC heterozygous 46156159 19 51414314 51414315 T TTATCTATC 4 INTERGENIC heterozygous 46520522 19 51415463 51415465 TG -- 9 INTERGENIC heterozygous 46408586 19 51424847 51424848 T TC 15 INTERGENIC heterozygous 46156162 19 51426822 51426824 GT -- 8 INTERGENIC heterozygous 46408594 19 51429548 51429549 T - 2 INTERGENIC homozygous 46408596 19 51429552 51429554 TT -- 2 INTERGENIC homozygous 46408598 19 51429556 51429560 TGTG ---- 5 INTERGENIC homozygous 46408601 19 51429562 51429563 A AAAAGAAC 5 INTERGENIC homozygous 46408603 19 51429566 51429567 T A 6 INTERGENIC homozygous 46213513 19 51429567 51429568 G A 6 INTERGENIC homozygous 46213514 19 51429569 51429570 C A 7 INTERGENIC homozygous 46213515 19 51429571 51429572 T A 7 INTERGENIC homozygous 46213516 19 51429572 51429573 G A 7 INTERGENIC homozygous 46213517 19 51429574 51429575 T A 7 INTERGENIC homozygous 46213518 19 51429576 51429577 T A 7 INTERGENIC homozygous 46213519 19 51429577 51429578 G A 7 INTERGENIC homozygous 46213520 19 51429581 51429582 G A 7 INTERGENIC homozygous 46156166 19 51429582 51429583 T A 7 INTERGENIC homozygous 46156167 19 51429583 51429584 G A 7 INTERGENIC homozygous 46156168 19 51429742 51429743 T - 10 INTERGENIC homozygous 46156169 19 51429756 51429757 A - 10 INTERGENIC homozygous 46156170 19 51429764 51429765 T TC 9 INTERGENIC homozygous 46156171 19 51429798 51429799 A T 4 INTERGENIC homozygous 46156172 19 51432577 51432585 CCCCCCCC -------- 28 INTERGENIC homozygous 46408605 19 51432584 51432585 C CTGAGATGT 25 INTERGENIC homozygous 46408607 19 51432586 51432587 C G 24 INTERGENIC homozygous 46156174 19 51432735 51432737 CC -- 22 INTERGENIC homozygous 46156175 19 51432736 51432737 C CTTTT 22 INTERGENIC homozygous 46408609 19 51432738 51432739 C A 23 INTERGENIC homozygous 46408611 19 51432741 51432745 CAGC ---- 25 INTERGENIC homozygous 46408613 19 51432745 51432746 A AC 24 INTERGENIC homozygous 46408615 19 51437792 51437796 TTCC ---- 7 INTERGENIC heterozygous 46431096 19 51438025 51438033 CCCCGCCC -------- 15 INTERGENIC homozygous 46408621 19 51438032 51438033 C CTGGAGGGAG 14 INTERGENIC homozygous 46408623 19 51438034 51438035 C A 14 INTERGENIC homozygous 46156178 19 51445191 51445192 G GCACA 6 INTERGENIC heterozygous 46431098 19 51445192 51445194 CA -- 6 INTERGENIC heterozygous 46463244 19 51450784 51450785 T - 14 INTERGENIC heterozygous 46463246 19 51451962 51451963 C CT 8 INTERGENIC heterozygous 46608924 19 51461242 51461244 GT -- 11 INTERGENIC heterozygous 46408625 19 51476101 51476108 CCCCCCC ------- 15 INTERGENIC homozygous 46381089 19 51476108 51476109 C A 13 INTERGENIC homozygous 46408629 19 51476111 51476112 C CA 14 INTERGENIC homozygous 46408631 19 51476112 51476113 C CATATA 13 INTERGENIC homozygous 46408633 19 51476179 51476180 C CACACATACACAAGCATACACATACACACACATACACATACACACATACACAAGCATACACATACACACACATACACATACATGAACACACACATATTCACACATACACACATACACAAGCATACACATACACACACATACACATACATGAACACACACATATACACACATATACACATAGATACATACACACATATACACACATAATATACATACACACAAATACACATATACATAAATACACACAAATACACATATACATAGATACACACATATAG 26 INTERGENIC heterozygous 46431117 19 51493489 51493491 CA -- 9 INTERGENIC heterozygous 46463250 19 51493528 51493529 A ACG 22 INTERGENIC homozygous 46156292 19 51498569 51498570 G GTTTTTTTTTTTTTTTT 10 INTERGENIC heterozygous 46381091 19 51504510 51504511 T TTTAAA 25 INTERGENIC homozygous 46156330 19 51505540 51505542 GT -- 6 INTERGENIC heterozygous 46408639 19 51518348 51518349 G T 15 INTERGENIC homozygous 46156381 19 51521943 51521944 G - 7 INTERGENIC heterozygous 46260802 19 51538114 51538116 GT -- 4 INTERGENIC heterozygous 46408645 19 51554708 51554709 G GAAT 14 INTERGENIC heterozygous 46156423 19 51557938 51557942 TCTA ---- 5 INTERGENIC homozygous 46408647 19 51558550 51558551 C CTGAGAATGGGACCCCCGTTGAAGGAA 2 INTERGENIC homozygous 46408649 19 51578030 51578036 ATATAT ------ 1 INTERGENIC homozygous 46608926 19 51582806 51582807 C CTTTCTTTGAGCCACCTATAGGCAGGAACACACTTATGCAGGTCCTCGGAAGAAAGCAGGAGCTGGGGCGCCTA 10 INTERGENIC homozygous 46408651 19 51590308 51590309 G GT 5 INTERGENIC heterozygous 46156507 19 51591669 51591670 G GTCTTGGGGTGGGGGAGATGGCTCAGC 17 INTERGENIC homozygous 46156509 19 51593556 51593557 C CTT 8 INTERGENIC heterozygous 46446163 19 51593556 51593557 C CT 8 INTERGENIC heterozygous 46431171 19 51614677 51614679 AC -- 9 INTERGENIC heterozygous 46508653 19 51622445 51622447 AC -- 1 INTERGENIC homozygous 46431179 19 51627481 51627482 T TC 22 INTERGENIC homozygous 46156602 19 51627513 51627514 C A 30 INTERGENIC homozygous 46156603 19 51631795 51631796 C CCA 3 INTERGENIC heterozygous 46431193 19 51637669 51637670 C - 8 INTERGENIC heterozygous 46260804 19 51643221 51643223 AC -- 7 INTERGENIC heterozygous 46408655 19 51651066 51651068 AC -- 6 INTERGENIC heterozygous 46408657 19 51655192 51655193 A - 15 INTERGENIC heterozygous 46156668 19 51656158 51656159 T - 9 INTERGENIC heterozygous 46156671 19 51670147 51670149 GT -- 8 INTERGENIC heterozygous 46156681 19 51679272 51679273 T C 18 INTERGENIC homozygous 46156711 19 51689969 51689971 TG -- 14 GENIC heterozygous 46156773 19 51699956 51699960 TGTG ---- 6 GENIC heterozygous 46534447 19 51699958 51699960 TG -- 6 GENIC heterozygous 46463275 19 51700137 51700138 C T 10 GENIC heterozygous 46156805 19 51707201 51707203 CA -- 15 GENIC heterozygous 46408686 19 51719561 51719562 C CAAAAAAAA 6 GENIC heterozygous 46463279 19 51723344 51723345 A G 29 GENIC homozygous 46156890 19 51723354 51723355 G GTAGATAGATAGATGGATAGATGGATAGATAGATGGATGGATGGATGGATAGATGGATGGATGGATGGATAGATGAATGGATGGATAGATGGATAGATGGATGGATGGATAGATGGATAGATGGATGGATAATGGATGGATGGA 20 GENIC heterozygous 46463281 19 51723575 51723576 A ACTGACACCCTAAGCAGCAGGAAGTAGTCTACCGATATCACCGCCCTCTTTCCCCTCTGCCCTTTTTTTCTCTACTATTTAGTGTTAGGGGG 43 GENIC homozygous 46408692 19 51728606 51728607 G T 32 GENIC homozygous 46156900 19 51733566 51733567 T - 7 GENIC heterozygous 46213544 19 51733885 51733886 A AG 5 GENIC homozygous 46156918 19 51733888 51733890 CC -- 5 GENIC homozygous 46408698 19 51738840 51738841 G GT 7 GENIC homozygous 46592715 19 51745973 51745974 C - 24 INTERGENIC homozygous 46156968 19 51746000 51746001 A - 31 INTERGENIC homozygous 46156969 19 51746005 51746006 C T 32 INTERGENIC homozygous 46156970 19 51746015 51746016 C - 33 INTERGENIC homozygous 46156971 19 51746028 51746029 G - 32 INTERGENIC homozygous 46156972 19 51747265 51747266 G GAA 10 INTERGENIC heterozygous 46446176 19 51747266 51747268 AA -- 10 INTERGENIC heterozygous 46156975 19 51747267 51747268 A - 10 INTERGENIC heterozygous 46156976 19 51748605 51748606 A AC 30 INTERGENIC homozygous 46156980 19 51767191 51767192 T TTGTGTGTGTGTG 9 GENIC heterozygous 46534449 19 51767196 51767204 TGTGTGTG -------- 9 GENIC heterozygous 46608929 19 51774740 51774741 C CTTT 4 GENIC heterozygous 46463297 19 51781399 51781400 C T 21 GENIC homozygous 46157050 19 51786248 51786250 CT -- 32 GENIC homozygous 46157062 19 51812975 51812976 C - 17 GENIC homozygous 46157091 19 51828372 51828373 C T 4 GENIC heterozygous 46274673 19 51828380 51828399 GAGGCTGACGGAATGGACA ------------------- 2 GENIC heterozygous 46463307 19 51828442 51828477 CTCATGCGCCGGGCGACTGGGCCCGAAACACGTGG ----------------------------------- 2 GENIC homozygous 46463309 19 51834426 51834427 T G 21 GENIC homozygous 46157124 19 51834429 51834433 ATTT ---- 25 GENIC homozygous 46381119 19 51834437 51834438 T TGG 24 GENIC homozygous 46381121 19 51834439 51834440 G GT 25 GENIC homozygous 46381123 19 51834451 51834452 C G 26 GENIC homozygous 46381125 19 51834453 51834454 A C 27 GENIC homozygous 46381127 19 51839606 51839607 G GAAAA 5 GENIC heterozygous 46408736 19 51839607 51839610 AAA --- 5 GENIC heterozygous 46608931 19 51859531 51859532 A AGAAG 13 INTERGENIC homozygous 46157173 19 51862498 51862499 T - 18 INTERGENIC heterozygous 46157182 19 51864940 51864943 TAT --- 16 GENIC heterozygous 46296516 19 51864944 51864945 T - 16 GENIC heterozygous 46296517 19 51865655 51865656 A C 32 GENIC homozygous 46157199 19 51879886 51879887 G GCACACACA 7 GENIC heterozygous 46408761 19 51879911 51879913 CA -- 7 GENIC heterozygous 46463327 19 51887968 51887970 AC -- 11 GENIC heterozygous 46157256 19 51896289 51896290 T - 10 GENIC heterozygous 46463333 19 51905488 51905492 ATAC ---- 9 GENIC heterozygous 46408775 19 51906796 51906798 AC -- 18 GENIC heterozygous 46508669 19 51914420 51914421 C - 29 GENIC homozygous 46157331 19 51915118 51915165 CAGGTTGTCAGTAGGGCGCTCCCTCCCTTAGCAGCCATTAAGTGTCC ----------------------------------------------- 17 GENIC possibly homozygous 46381155 19 51943304 51943305 A AG 26 GENIC homozygous 46157521 19 51943328 51943329 G A 21 GENIC homozygous 46408811 19 51943394 51943395 A G 11 GENIC homozygous 46157525 19 51943403 51943404 A G 11 GENIC homozygous 46157526 19 51943417 51943419 AC -- 11 GENIC heterozygous 46157527 19 51944286 51944287 T A 17 GENIC homozygous 46381158 19 51949020 51949021 A AAC 24 GENIC homozygous 46157576 19 51950781 51950782 A AG 19 GENIC homozygous 46157581 19 51950787 51950788 T - 19 GENIC homozygous 46157582 19 51954158 51954159 A C 26 GENIC homozygous 46157590 19 51956267 51956270 CTC --- 18 GENIC homozygous 46408817 19 51956270 51956271 G GAGC 18 GENIC homozygous 46408819 19 51956305 51956306 A AAG 16 GENIC homozygous 46157599 19 51956309 51956310 T - 18 GENIC homozygous 46157600