chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54796713 54796714 G C 26 GENIC homozygous 46263480 19 54797210 54797211 A G 23 GENIC homozygous 46165682 19 54798100 54798101 C CT 12 GENIC possibly homozygous 46165683 19 54798170 54798171 T C 19 GENIC homozygous 46165684 19 54798356 54798357 G C 23 GENIC homozygous 46165685 19 54798440 54798441 G A 17 GENIC homozygous 46165686 19 54798444 54798445 C - 17 GENIC homozygous 46263481 19 54798523 54798524 G T 28 GENIC homozygous 46165687 19 54798581 54798582 C T 22 GENIC homozygous 46165688 19 54798866 54798867 G A 15 GENIC homozygous 46263482 19 54799335 54799336 A G 16 GENIC homozygous 46165690 19 54799367 54799368 G T 24 GENIC homozygous 46263483 19 54799977 54799978 T TTGTC 12 GENIC homozygous 46165691 19 54800780 54800781 C T 24 GENIC homozygous 46263484 19 54801195 54801196 C T 17 GENIC homozygous 46263485 19 54801444 54801445 A G 23 GENIC homozygous 46165696 19 54801681 54801682 T A 23 GENIC homozygous 46165697 19 54801926 54801927 C T 27 GENIC homozygous 46263486 19 54802039 54802040 G A 31 GENIC homozygous 46263487 19 54802317 54802318 C CT 15 GENIC possibly homozygous 46165699 19 54802382 54802383 C T 9 GENIC homozygous 46263488 19 54802442 54802443 T C 9 GENIC homozygous 46263489 19 54802638 54802639 C T 7 GENIC homozygous 46274787 19 54802867 54802869 TT -- 6 GENIC homozygous 46263492 19 54803355 54803356 C T 30 GENIC homozygous 46263493 19 54804212 54804213 C A 7 GENIC homozygous 46165707 19 54804596 54804597 G A 29 GENIC homozygous 46263494 19 54804725 54804726 A G 20 GENIC homozygous 46165708 19 54804778 54804779 A - 20 GENIC homozygous 46263495 19 54804792 54804793 T C 18 GENIC homozygous 46165711 19 54805799 54805800 T C 15 GENIC homozygous 46165713 19 54807456 54807457 T G 20 GENIC homozygous 46263497 19 54808867 54808868 T C 7 GENIC homozygous 46165717 19 54809284 54809285 C CTTTTT 4 GENIC heterozygous 46410534 19 54804160 54804161 T TTACACACA 2 GENIC homozygous 46410522 19 54804779 54804780 T C 20 GENIC homozygous 46410527 19 54805548 54805549 A ATTTTTTT 10 GENIC homozygous 46410529 19 54806844 54806849 TTTTT ----- 3 GENIC heterozygous 46410531 19 54812599 54812600 T TA 6 GENIC homozygous 46165723 19 54812799 54812800 T C 12 GENIC homozygous 46165724 19 54813739 54813740 A G 26 GENIC homozygous 46165725 19 54813967 54813968 G T 26 GENIC homozygous 46263499 19 54814788 54814789 G T 25 GENIC homozygous 46165726 19 54816261 54816262 G A 10 GENIC homozygous 46263500 19 54817494 54817495 A AAAAC 18 GENIC heterozygous 46165729 19 54817494 54817495 A AAAACAAAC 18 GENIC possibly homozygous 46263501 19 54818005 54818006 T G 15 GENIC homozygous 46410536 19 54818025 54818026 T G 16 GENIC homozygous 46410538 19 54819047 54819048 G A 14 GENIC homozygous 46263502 19 54819572 54819573 C T 11 GENIC homozygous 46263503 19 54821487 54821488 C T 19 GENIC homozygous 46263504 19 54821754 54821755 A - 9 GENIC homozygous 46263505 19 54822157 54822158 G A 17 GENIC homozygous 46263506 19 54822215 54822216 A AACACACAC 13 GENIC homozygous 46263507 19 54822248 54822250 CG -- 9 GENIC homozygous 46410544 19 54822274 54822275 T G 10 GENIC homozygous 46263508 19 54822462 54822463 A - 8 GENIC homozygous 46263509 19 54823167 54823168 A T 22 GENIC homozygous 46165740 19 54823168 54823169 A C 23 GENIC homozygous 46165741 19 54823549 54823550 T TATAAATAAA 6 GENIC homozygous 46263510 19 54825109 54825110 C T 21 GENIC homozygous 46263511 19 54825386 54825392 GAGAGA ------ 11 GENIC homozygous 46263512 19 54825932 54825933 C CTTGGGG 3 GENIC homozygous 46410546 19 54825937 54825938 A AGCACAGTGGTAGAGCGCTTG 2 GENIC homozygous 46410548 19 54825942 54825943 T TGGCAA 2 GENIC homozygous 46410550 19 54826660 54826661 A G 19 GENIC homozygous 46263514 19 54826853 54826854 C T 17 GENIC homozygous 46263515 19 54826954 54826956 AA -- 12 GENIC possibly homozygous 46165754 19 54826966 54826974 ACACACAT -------- 14 GENIC possibly homozygous 46410554 19 54827011 54827012 C CGAGAGAGAGAGAGAGAGA 10 GENIC heterozygous 46410558 19 54827011 54827012 C CGAGAGAGAGAGAGAGAGAGA 10 GENIC heterozygous 46410560 19 54827099 54827100 T C 33 GENIC homozygous 46263516 19 54827720 54827721 T TACAC 12 GENIC homozygous 46263517 19 54828332 54828333 C T 18 GENIC homozygous 46263519 19 54828409 54828410 T C 18 GENIC homozygous 46263520 19 54828466 54828467 G A 13 GENIC homozygous 46263521 19 54828710 54828711 C T 26 GENIC homozygous 46263522 19 54829155 54829156 G A 19 GENIC homozygous 46263523 19 54829596 54829597 T C 14 GENIC homozygous 46165759 19 54830070 54830071 A G 10 GENIC homozygous 46165761 19 54832392 54832393 A G 29 GENIC homozygous 46165765 19 54832443 54832444 G C 23 GENIC homozygous 46263524 19 54832550 54832551 A G 20 GENIC heterozygous 46165766 19 54833114 54833115 A G 13 GENIC homozygous 46263525 19 54833149 54833150 G GA 14 GENIC homozygous 46165767 19 54833248 54833249 T C 21 GENIC homozygous 46165768 19 54833914 54833915 A T 14 GENIC homozygous 46263526 19 54834550 54834551 C CG 32 GENIC homozygous 46165769 19 54835194 54835195 C G 5 GENIC homozygous 46165771 19 54836227 54836228 C CT 14 GENIC possibly homozygous 46263527 19 54836735 54836736 G GA 9 GENIC homozygous 46410562 19 54837078 54837079 T C 10 GENIC homozygous 46165772 19 54837155 54837156 G A 10 GENIC homozygous 46263528 19 54837624 54837625 T C 24 GENIC homozygous 46165773 19 54837775 54837776 C CT 23 GENIC homozygous 46263529 19 54837932 54837933 C G 12 GENIC homozygous 46263530 19 54839988 54839989 C T 20 GENIC homozygous 46165775 19 54840048 54840049 G A 17 GENIC homozygous 46263532 19 54840847 54840848 A G 16 GENIC homozygous 46165776 19 54841401 54841402 G A 18 GENIC homozygous 46263533 19 54841513 54841514 T C 19 GENIC homozygous 46165777 19 54842425 54842426 G C 24 GENIC homozygous 46165779 19 54842768 54842769 C A 15 GENIC homozygous 46165780 19 54843246 54843247 A T 30 GENIC homozygous 46263534 19 54845019 54845020 C T 25 GENIC homozygous 46165783 19 54845127 54845128 A T 20 GENIC homozygous 46165784 19 54845236 54845237 T C 23 GENIC homozygous 46263535 19 54845241 54845242 A G 24 GENIC homozygous 46165786 19 54846433 54846434 T C 19 GENIC homozygous 46165787 19 54846839 54846840 T A 21 GENIC homozygous 46263536 19 54847081 54847082 T C 17 GENIC homozygous 46165789 19 54847657 54847658 C G 8 GENIC homozygous 46165790 19 54848436 54848437 T C 6 GENIC homozygous 46165796 19 54848939 54848940 T A 27 GENIC homozygous 46263538 19 54848960 54848961 G A 30 GENIC homozygous 46263539 19 54850063 54850064 C A 24 GENIC homozygous 46263540 19 54850197 54850198 T G 21 GENIC homozygous 46165799 19 54851323 54851324 G A 18 GENIC homozygous 46263541 19 54818018 54818021 TTT --- 16 GENIC homozygous 46213875 19 54835157 54835161 AAAA ---- 1 GENIC homozygous 46213877 19 54829975 54829976 T - 5 GENIC heterozygous 46508768 19 54847548 54847566 GTGTGTGTGTGTGTGTGT ------------------ 2 GENIC homozygous 46410568 19 54851829 54851830 T C 9 GENIC homozygous 46165801 19 54852265 54852266 G A 19 GENIC homozygous 46263542 19 54852348 54852349 T A 21 GENIC homozygous 46263543 19 54852568 54852569 T G 23 GENIC homozygous 46165802 19 54852996 54852997 C T 20 GENIC homozygous 46263544 19 54854985 54854986 C T 28 GENIC homozygous 46263547 19 54854500 54854501 G A 20 GENIC homozygous 46263545 19 54854511 54854512 T C 21 GENIC homozygous 46263546 19 54854760 54854761 T G 20 GENIC homozygous 46165805 19 54854987 54854994 ACGCAGA ------- 28 GENIC homozygous 46263548 19 54855113 54855114 C T 14 GENIC homozygous 46263549 19 54855160 54855161 A G 15 GENIC homozygous 46263550 19 54855231 54855232 A T 17 GENIC homozygous 46263551 19 54855232 54855233 C G 17 GENIC homozygous 46263552 19 54855307 54855308 G GTT 10 GENIC homozygous 46263553 19 54855827 54855828 T - 7 GENIC homozygous 46263554 19 54856005 54856006 A AC 17 GENIC homozygous 46263555 19 54856009 54856010 A AC 18 GENIC homozygous 46263557 19 54856011 54856012 A AAAC 18 GENIC homozygous 46263559 19 54856486 54856487 A G 22 GENIC homozygous 46165810 19 54856512 54856520 ACATACAT -------- 6 GENIC heterozygous 46508770 19 54856516 54856520 ACAT ---- 6 GENIC heterozygous 46410572 19 54856930 54856931 T TAAAC 9 GENIC homozygous 46165811 19 54857076 54857077 G A 7 GENIC homozygous 46165812 19 54857198 54857199 C T 5 GENIC homozygous 46263561 19 54857400 54857401 C T 8 GENIC homozygous 46263562 19 54857938 54857939 T A 30 GENIC homozygous 46165813 19 54858121 54858122 G A 31 GENIC homozygous 46263563 19 54858154 54858155 G A 29 GENIC homozygous 46263564 19 54858456 54858457 A G 24 GENIC homozygous 46165814 19 54858539 54858540 T TG 2 GENIC homozygous 46263565 19 54859452 54859453 G A 28 GENIC homozygous 46263566 19 54859720 54859721 A AAAAC 20 GENIC homozygous 46165817 19 54859934 54859935 G A 22 GENIC homozygous 46263567 19 54860087 54860088 A G 18 GENIC homozygous 46165819 19 54861425 54861426 T C 29 GENIC homozygous 46165820 19 54861580 54861581 C T 28 GENIC homozygous 46263568 19 54863528 54863529 C CGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCA 6 GENIC homozygous 46410574 19 54863777 54863778 T C 9 GENIC homozygous 46165822 19 54864192 54864193 A G 16 GENIC homozygous 46165824 19 54864237 54864238 C G 13 GENIC homozygous 46263569 19 54865497 54865498 A - 15 GENIC homozygous 46263570 19 54866344 54866345 C T 8 GENIC homozygous 46165826 19 54866478 54866479 T A 12 GENIC homozygous 46165827 19 54867489 54867490 G GAA 3 GENIC homozygous 46165829 19 54869950 54869951 G C 6 GENIC homozygous 46263575 19 54870110 54870111 T C 16 GENIC homozygous 46263576 19 54871153 54871154 C T 26 GENIC homozygous 46263577 19 54871368 54871369 G T 24 GENIC homozygous 46165835 19 54871680 54871681 G A 15 GENIC homozygous 46165837 19 54871803 54871804 A - 5 GENIC homozygous 46263578 19 54871809 54871810 C T 5 GENIC homozygous 46263579 19 54871890 54871891 T C 5 GENIC homozygous 46165838 19 54871969 54871970 T G 8 GENIC homozygous 46263580 19 54872242 54872243 G GTCAGTGCTCTTAA 5 GENIC homozygous 46165839 19 54872812 54872813 A G 11 GENIC homozygous 46165843 19 54872893 54872894 T C 12 GENIC homozygous 46165844 19 54873103 54873104 T C 6 GENIC homozygous 46165845 19 54873309 54873310 A G 4 GENIC homozygous 46263582 19 54873353 54873354 T C 3 GENIC homozygous 46263583 19 54873366 54873367 T A 3 GENIC homozygous 46263584 19 54873546 54873547 C A 3 GENIC homozygous 46263585 19 54874013 54874014 T G 6 GENIC homozygous 46165850 19 54874041 54874042 C T 6 GENIC homozygous 46263586 19 54874187 54874188 G A 10 GENIC homozygous 46165853 19 54874215 54874216 A - 11 GENIC homozygous 46263587 19 54874308 54874309 T A 15 GENIC homozygous 46263588 19 54875177 54875178 A G 15 GENIC homozygous 46165856 19 54875277 54875278 G A 16 GENIC homozygous 46165857 19 54875753 54875754 C T 9 GENIC homozygous 46165859 19 54875941 54875942 T A 3 GENIC homozygous 46165861 19 54876140 54876142 AC -- 7 GENIC heterozygous 46508773 19 54876252 54876253 T C 18 GENIC homozygous 46165862 19 54876398 54876399 A T 19 GENIC homozygous 46165863 19 54876458 54876463 AAAAA ----- 12 GENIC homozygous 46165867 19 54876478 54876479 C CA 19 GENIC homozygous 46165868 19 54876624 54876629 AAAAC ----- 21 GENIC homozygous 46165869 19 54877087 54877088 T C 17 GENIC homozygous 46165870 19 54877695 54877817 AAGAGTTTTGTTCCGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCTCAGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA -------------------------------------------------------------------------------------------------------------------------- 22 GENIC homozygous 46381622 19 54878078 54878079 A C 22 GENIC homozygous 46165871 19 54878560 54878561 A G 12 GENIC homozygous 46263589 19 54878572 54878573 G A 19 GENIC homozygous 46165873 19 54878579 54878580 T C 19 GENIC homozygous 46263590 19 54878585 54878586 T TC 21 GENIC homozygous 46165875 19 54878613 54878614 G A 23 GENIC homozygous 46263591 19 54878842 54878856 AAGCACATACTCTG -------------- 30 GENIC homozygous 46263592 19 54878903 54878904 A G 33 GENIC homozygous 46165876 19 54879203 54879204 T C 32 GENIC homozygous 46165877 19 54879431 54879432 T C 23 GENIC homozygous 46165878 19 54880060 54880061 T C 26 GENIC homozygous 46165879 19 54880726 54880728 AC -- 14 GENIC homozygous 46165884 19 54880856 54880857 G GACAA 25 GENIC homozygous 46165885 19 54880874 54880875 C G 28 GENIC homozygous 46263593 19 54882546 54882547 T TA 6 GENIC heterozygous 46165889 19 54882546 54882547 T TAA 6 GENIC heterozygous 46263594 19 54882723 54882724 T A 6 GENIC homozygous 46165890 19 54883080 54883084 GTGT ---- 5 GENIC heterozygous 46410590 19 54883229 54883344 TGTTGGGGTTGGGGATTTAGCTCAGTGGTTAGAGCGCTGGCCTAGGAAGCCCAAGGCCCTGGGTTCGGTCCCCAGCTCCAAAAAAAGAACCAAAAAAAAAAAAAAAAATTATTTC ------------------------------------------------------------------------------------------------------------------- 23 GENIC homozygous 46381632 19 54883876 54883877 G GA 1 GENIC homozygous 46165895 19 54884059 54884060 G A 5 GENIC homozygous 46165896 19 54884082 54884194 AATGAATAAAAATTTTTTTTTTTTCTTTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCC ---------------------------------------------------------------------------------------------------------------- 3 GENIC homozygous 46410592 19 54865938 54865939 T - 11 GENIC homozygous 46296753