chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 29613002 29613003 T - 8 INTERGENIC homozygous 46090161 19 29613015 29613016 T - 5 INTERGENIC homozygous 46090164 19 29613021 29613022 T - 3 INTERGENIC homozygous 46090165 19 29613025 29613026 T - 2 INTERGENIC homozygous 46090166 19 29613029 29613030 G - 2 INTERGENIC homozygous 46090167 19 29613034 29613035 T - 2 INTERGENIC homozygous 46090168 19 29613038 29613043 TATCT ----- 3 INTERGENIC homozygous 46090169 19 29613048 29613049 T - 4 INTERGENIC homozygous 46090170 19 29613051 29613052 T - 5 INTERGENIC homozygous 46401834 19 29613053 29613055 TT -- 5 INTERGENIC homozygous 46401836 19 29613056 29613057 T - 5 INTERGENIC homozygous 46090171 19 29613059 29613060 T - 6 INTERGENIC homozygous 46090172 19 29613073 29613074 T - 8 INTERGENIC homozygous 46090173 19 29613090 29613091 T - 15 INTERGENIC homozygous 46090174 19 29613099 29613100 T - 16 INTERGENIC homozygous 46090175 19 29615201 29615202 A AT 23 INTERGENIC homozygous 46090176 19 29630665 29630669 ACAC ---- 9 INTERGENIC heterozygous 46090177 19 29630667 29630669 AC -- 9 INTERGENIC heterozygous 46401841 19 29634887 29634889 GT -- 24 INTERGENIC heterozygous 46401843 19 29638118 29638119 G GCC 18 INTERGENIC homozygous 46090178 19 29651838 29651839 A ATTTGTAAGTTGAACAGCTTGCTGTAGAGGAATCTGAGAGCAGAGGAGCAAGACCATTCCCAGAAACAAAGAGAAGTTACCATTACCGAGAATTAACAAACTCGTGAAACCTAGATGGATTT 36 INTERGENIC possibly homozygous 46401845 19 29702179 29702180 C CGTGT 9 GENIC heterozygous 46090182 19 29702179 29702180 C CGT 9 GENIC heterozygous 46401859 19 29717612 29717613 G GA 10 INTERGENIC homozygous 46090184 19 29731863 29731864 G GGA 7 INTERGENIC possibly homozygous 46238653 19 29735140 29735142 AC -- 7 INTERGENIC heterozygous 46090186 19 29736950 29736952 GA -- 6 INTERGENIC heterozygous 46401863 19 29690753 29690758 CTTTT ----- 10 INTERGENIC homozygous 46429251 19 29693785 29693787 CT -- 9 INTERGENIC heterozygous 46429253 19 29702179 29702180 C CATGTGTGT 9 GENIC heterozygous 46429256 19 29753565 29753569 AGAT ---- 12 INTERGENIC heterozygous 46459471 19 29765460 29765461 A G 16 INTERGENIC homozygous 46090189 19 29780444 29780445 T TC 26 INTERGENIC homozygous 46090190 19 29795587 29795588 T TTG 2 INTERGENIC heterozygous 46429265 19 29795604 29795606 TG -- 2 INTERGENIC heterozygous 46459473 19 29806738 29806740 CA -- 7 INTERGENIC heterozygous 46429269 19 29806881 29806883 TG -- 5 INTERGENIC heterozygous 46401869 19 29842943 29842944 T C 18 INTERGENIC homozygous 46090196 19 29846373 29846375 CT -- 7 INTERGENIC heterozygous 46459475 19 29862093 29862094 C T 29 INTERGENIC homozygous 46090197 19 29862095 29862096 C T 30 INTERGENIC homozygous 46090198 19 29876174 29876175 C - 14 INTERGENIC homozygous 46090201 19 29876175 29876176 C A 14 INTERGENIC homozygous 46401881 19 29876177 29876178 C A 15 INTERGENIC homozygous 46401883 19 29876193 29876194 C - 17 INTERGENIC homozygous 46090202 19 29876201 29876202 C A 17 INTERGENIC homozygous 46090203 19 29876202 29876203 C A 17 INTERGENIC homozygous 46090204 19 29876204 29876207 CCT --- 17 INTERGENIC homozygous 46090205 19 29876233 29876234 C CA 18 INTERGENIC homozygous 46090206 19 29876237 29876238 C - 21 INTERGENIC homozygous 46090207 19 29876247 29876248 T A 22 INTERGENIC homozygous 46090208 19 29876254 29876255 C CA 23 INTERGENIC homozygous 46090209 19 29876259 29876260 C A 25 INTERGENIC homozygous 46090211 19 29876262 29876265 CCT --- 25 INTERGENIC homozygous 46401885 19 29876265 29876266 C CAA 23 INTERGENIC homozygous 46401887 19 29876275 29876276 T TA 26 INTERGENIC homozygous 46090213 19 29876283 29876284 C - 27 INTERGENIC homozygous 46090214 19 29876292 29876293 C CT 29 INTERGENIC homozygous 46090215 19 29876316 29876317 T TG 27 INTERGENIC homozygous 46090216 19 29895916 29895917 G C 9 INTERGENIC homozygous 46090227 19 29895927 29895928 T G 7 INTERGENIC homozygous 46090228 19 29895939 29895940 G C 6 INTERGENIC homozygous 46090229 19 29895965 29895966 A ATATATATATATGTATGTATGTATGTATGTATGTATGTATG 5 INTERGENIC homozygous 46429281 19 29896013 29896015 AG -- 6 INTERGENIC heterozygous 46090233 19 29899815 29899816 T - 8 INTERGENIC heterozygous 46459477 19 29907710 29907711 A T 16 INTERGENIC homozygous 46090238 19 29936604 29936605 G GGGCTGGAGAGATGGCTCAGTGGTTAAGAACACCCGACTGTTCTTCCAGAGGT 3 INTERGENIC homozygous 46401889 19 29938997 29938998 C G 25 INTERGENIC homozygous 46090246 19 29940520 29940521 C A 4 INTERGENIC homozygous 46090247 19 29940643 29940644 T C 9 INTERGENIC homozygous 46090248 19 29968318 29968319 T G 27 INTERGENIC homozygous 46090252 19 29978912 29978913 A G 22 INTERGENIC homozygous 46090254 19 29978986 29978987 G C 16 INTERGENIC homozygous 46090255 19 29978999 29979000 T C 17 INTERGENIC homozygous 46090256 19 29979578 29979579 A ACTGTTTCATTAGGCC 18 INTERGENIC homozygous 46090257 19 29981845 29981846 T TAAGA 19 INTERGENIC heterozygous 46090264 19 29981846 29981850 AAGA ---- 19 INTERGENIC heterozygous 46090265 19 29981853 29981854 A AAAGAAAGG 33 INTERGENIC heterozygous 46379536 19 29982420 29982421 T TCTAAAG 5 INTERGENIC heterozygous 46401891 19 29993278 29993279 A AG 25 INTERGENIC homozygous 46090280 19 29994351 29994352 T - 15 INTERGENIC heterozygous 46429285 19 29994844 29994846 TC -- 10 INTERGENIC heterozygous 46429287 19 29999138 29999146 TGTGTGTG -------- 3 INTERGENIC homozygous 46401895 19 29999486 29999487 T - 38 INTERGENIC heterozygous 46090297 19 30014629 30014630 T - 34 INTERGENIC heterozygous 46090304 19 30015497 30015498 C CTT 12 INTERGENIC heterozygous 46401899 19 30019003 30019004 C - 20 INTERGENIC homozygous 46209296 19 30030095 30030096 T TG 8 INTERGENIC heterozygous 46459479 19 30042419 30042420 T - 23 INTERGENIC heterozygous 46090351 19 30042429 30042430 G C 22 INTERGENIC heterozygous 46090352 19 30048323 30048325 GT -- 18 INTERGENIC heterozygous 46401903 19 30048507 30048508 T TTGTGTGTGTGTGTG 34 INTERGENIC heterozygous 46379538 19 30048508 30048510 TG -- 34 INTERGENIC heterozygous 46090359 19 30073821 30073823 AT -- 9 INTERGENIC heterozygous 46444771 19 30074222 30074223 G GA 29 INTERGENIC homozygous 46090362 19 30085388 30085389 T TA 13 INTERGENIC heterozygous 46444774 19 30091453 30091455 GT -- 4 INTERGENIC heterozygous 46429296 19 30095020 30095021 G GA 8 INTERGENIC heterozygous 46401905 19 30095023 30095024 A - 8 INTERGENIC heterozygous 46401907 19 30104416 30104417 G - 15 INTERGENIC heterozygous 46379540 19 30104843 30104845 TG -- 2 INTERGENIC heterozygous 46401909 19 30108481 30108482 A - 25 INTERGENIC homozygous 46090369 19 30108484 30108485 A - 25 INTERGENIC homozygous 46090370 19 30108529 30108530 T TTG 19 INTERGENIC homozygous 46090371 19 30109304 30109305 C CGATA 9 INTERGENIC homozygous 46459481 19 30110829 30110830 T TCCCCTCTCCCTCCCCCTCCC 4 INTERGENIC homozygous 46379542 19 30112309 30112315 GTGTGC ------ 12 INTERGENIC homozygous 46459484 19 30112738 30112739 A AG 3 INTERGENIC homozygous 46090375 19 30116209 30116210 T TC 16 INTERGENIC homozygous 46090376 19 30116211 30116212 C CA 17 INTERGENIC homozygous 46090377 19 30128664 30128665 C CTG 5 INTERGENIC heterozygous 46239436 19 30137551 30137552 A C 1 INTERGENIC homozygous 46239499 19 30137561 30137562 A C 2 INTERGENIC homozygous 46239500 19 30137566 30137567 A C 2 INTERGENIC homozygous 46090379 19 30137574 30137575 G C 2 INTERGENIC homozygous 46090380 19 30137579 30137580 A C 2 INTERGENIC homozygous 46090381 19 30137583 30137584 A C 2 INTERGENIC homozygous 46090382 19 30137587 30137588 G T 3 INTERGENIC homozygous 46090383 19 30137590 30137591 A T 4 INTERGENIC homozygous 46090384 19 30137593 30137594 A C 4 INTERGENIC homozygous 46090385 19 30137599 30137600 A T 4 INTERGENIC homozygous 46090386 19 30137601 30137602 A C 4 INTERGENIC homozygous 46239501 19 30137602 30137603 A C 4 INTERGENIC homozygous 46239502 19 30137605 30137606 A T 4 INTERGENIC homozygous 46090387 19 30137608 30137609 G C 5 INTERGENIC homozygous 46090388 19 30137610 30137611 G C 5 INTERGENIC homozygous 46090389 19 30137616 30137620 AAAA ---- 10 INTERGENIC homozygous 46401915 19 30137619 30137620 A ATTCT 10 INTERGENIC homozygous 46401917 19 30137623 30137624 A T 11 INTERGENIC homozygous 46401919 19 30137629 30137630 G C 11 INTERGENIC homozygous 46090390 19 30137630 30137631 A C 11 INTERGENIC homozygous 46090391 19 30163842 30163850 AGATAGAT -------- 10 INTERGENIC homozygous 46459486 19 30137632 30137633 A C 12 INTERGENIC homozygous 46090392 19 30137635 30137636 A T 13 INTERGENIC homozygous 46090393 19 30137638 30137639 A C 15 INTERGENIC homozygous 46090394 19 30158402 30158403 T TGGCTGGAGAGCCCATGACCTCTGTCCCTGGCTCGCAAAACCTTATGCTGCATCTCATCTCCTAGTAGCCCTGGGAA 12 INTERGENIC homozygous 46401921 19 30160996 30160997 C CA 6 INTERGENIC heterozygous 46401923 19 30160997 30160998 A - 6 INTERGENIC heterozygous 46090399 19 30163982 30163994 TAGATAGATAGA ------------ 12 INTERGENIC homozygous 46459488 19 30164423 30164424 T TAC 3 INTERGENIC homozygous 46090401 19 30189095 30189098 GGG --- 15 INTERGENIC heterozygous 46327283 19 30189096 30189098 GG -- 15 INTERGENIC heterozygous 46090411 19 30189097 30189098 G - 15 INTERGENIC heterozygous 46090412 19 30189787 30189789 AC -- 14 INTERGENIC heterozygous 46401931 19 30197346 30197347 G GTC 15 INTERGENIC heterozygous 46459490 19 30197347 30197349 TC -- 15 INTERGENIC heterozygous 46401935 19 30197595 30197597 CA -- 7 INTERGENIC heterozygous 46401937 19 30199083 30199086 CAC --- 6 INTERGENIC heterozygous 46209310 19 30227055 30227057 TG -- 3 INTERGENIC heterozygous 46401939 19 30232069 30232071 AC -- 20 INTERGENIC homozygous 46209313 19 30235821 30235822 T TGG 26 INTERGENIC homozygous 46090421 19 30241616 30241618 GA -- 14 INTERGENIC heterozygous 46444780 19 30241657 30241661 AGAT ---- 4 INTERGENIC homozygous 46459492 19 30241731 30241732 A AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATACTGTCAGACAGACAGATGATATATGGATGAAAGACAGAATGATAAATATAGAT 23 INTERGENIC heterozygous 46401946 19 30241909 30241910 A ATG 10 INTERGENIC heterozygous 46090423 19 30242325 30242327 GT -- 10 INTERGENIC heterozygous 46429302 19 30251176 30251177 T TA 29 INTERGENIC homozygous 46090425 19 30252661 30252662 G GAC 3 INTERGENIC heterozygous 46401950 19 30252662 30252664 AC -- 3 INTERGENIC heterozygous 46401952 19 30262718 30262720 CC -- 7 INTERGENIC heterozygous 46401954 19 30262719 30262720 C - 7 INTERGENIC possibly homozygous 46090426 19 30265650 30265651 G - 33 INTERGENIC homozygous 46090427 19 30265654 30265655 G A 34 INTERGENIC homozygous 46090428 19 30265655 30265656 G A 34 INTERGENIC homozygous 46090429 19 30265656 30265657 G C 35 INTERGENIC homozygous 46090430 19 30270391 30270392 G C 13 INTERGENIC homozygous 46090431 19 30270394 30270395 A T 13 INTERGENIC homozygous 46090432 19 30271796 30271800 ACAC ---- 32 INTERGENIC heterozygous 46459495 19 30271798 30271800 AC -- 32 INTERGENIC heterozygous 46429304 19 30273520 30273524 TGTG ---- 7 INTERGENIC heterozygous 46090434 19 30273522 30273524 TG -- 7 INTERGENIC heterozygous 46429307 19 30276795 30276796 A - 12 INTERGENIC homozygous 46090438 19 30280504 30280506 GT -- 16 INTERGENIC heterozygous 46401956 19 30289067 30289069 CT -- 9 INTERGENIC heterozygous 46239851 19 30289091 30289093 AT -- 20 INTERGENIC heterozygous 46429309 19 30290281 30290283 TT -- 5 INTERGENIC heterozygous 46459497 19 30305345 30305346 T TA 15 GENIC heterozygous 46239868 19 30305346 30305347 A - 15 GENIC heterozygous 46459499 19 30305433 30305435 TC -- 8 GENIC heterozygous 46090442 19 30305845 30305847 GA -- 10 GENIC possibly homozygous 46209320 19 30306176 30306177 G GA 20 GENIC homozygous 46090443 19 30314952 30314953 C - 7 GENIC homozygous 46090458 19 30320049 30320050 C CT 20 GENIC homozygous 46306625 19 30322075 30322076 G GTGTGTGTGTGTGTGTGTGTGTGTGTATTCATACGTACACACACACACACATATGACTTCCCAAGAACTTATCTAATAAA 7 GENIC homozygous 46401962 19 30326195 30326199 ACAC ---- 11 GENIC heterozygous 46459501 19 30335542 30335543 C CT 4 GENIC heterozygous 46459503 19 30340709 30340710 A ACAG 32 GENIC homozygous 46090464