chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54462678 54462679 C A 26 GENIC homozygous 46164750 19 54464636 54464637 C G 21 GENIC homozygous 46164751 19 54465787 54465788 G GGTGTGTGTGT 1 GENIC homozygous 46410250 19 54465822 54465824 GT -- 1 GENIC homozygous 46410254 19 54465989 54465990 T C 10 GENIC homozygous 46164754 19 54468206 54468207 A G 23 GENIC homozygous 46164755 19 54468380 54468381 G GAAAA 8 GENIC heterozygous 46410256 19 54469482 54469483 G A 24 GENIC homozygous 46164759 19 54469638 54469639 T C 20 GENIC homozygous 46296721 19 54469785 54469786 T C 18 GENIC homozygous 46164760 19 54471371 54471372 A AAGAGAG 4 GENIC heterozygous 46431528 19 54471374 54471376 AG -- 4 GENIC heterozygous 46410260 19 54471457 54471458 C G 17 GENIC homozygous 46164762 19 54471471 54471472 C G 18 GENIC homozygous 46164763 19 54471474 54471475 A AG 18 GENIC homozygous 46164764 19 54471569 54471573 ACTA ---- 19 GENIC homozygous 46296722 19 54471990 54471991 T C 23 GENIC homozygous 46296723 19 54472204 54472205 A G 31 GENIC homozygous 46296724 19 54472892 54472893 C CT 11 GENIC homozygous 46164765 19 54473719 54473720 G A 13 GENIC homozygous 46296725 19 54473763 54473764 A G 14 GENIC homozygous 46296726 19 54474371 54474375 AAAA ---- 16 GENIC possibly homozygous 46164768 19 54475177 54475178 T C 33 GENIC homozygous 46164770 19 54475180 54475181 T TTG 26 GENIC heterozygous 46164771 19 54475180 54475181 T TTGTG 26 GENIC possibly homozygous 46213828 19 54475996 54475997 C CGT 11 GENIC homozygous 46164772 19 54478511 54478512 A G 27 GENIC homozygous 46164774 19 54478984 54478985 T C 15 GENIC homozygous 46164775 19 54479382 54479383 A AG 24 GENIC homozygous 46164776 19 54479863 54479864 T G 23 GENIC homozygous 46164777 19 54480156 54480157 T TCATTTA 23 GENIC homozygous 46164778 19 54480240 54480241 C CA 18 GENIC homozygous 46164779 19 54481088 54481089 C T 24 GENIC homozygous 46164780 19 54481220 54481239 GCAAGCTGTACTTCATAGT ------------------- 29 GENIC homozygous 46296727 19 54481626 54481627 C T 23 GENIC homozygous 46164781 19 54482791 54482792 A G 12 GENIC homozygous 46164783 19 54482806 54482807 T C 12 GENIC homozygous 46164784 19 54483413 54483414 T C 27 GENIC homozygous 46164785 19 54483705 54483706 C T 26 GENIC homozygous 46164787 19 54485427 54485428 T C 21 GENIC homozygous 46164788 19 54486002 54486003 T - 14 GENIC homozygous 46164789 19 54486113 54486114 T G 15 GENIC homozygous 46164790 19 54486121 54486122 C CT 5 GENIC heterozygous 46164791 19 54486467 54486468 C A 25 GENIC homozygous 46164793 19 54486510 54486511 G GA 18 GENIC homozygous 46164794 19 54486668 54486669 T G 31 GENIC homozygous 46164795 19 54486736 54486737 C T 33 GENIC homozygous 46164796 19 54486829 54486830 G A 29 GENIC homozygous 46164797 19 54487487 54487488 G T 14 GENIC homozygous 46164799 19 54487501 54487502 C T 14 GENIC homozygous 46164800 19 54487507 54487508 C A 12 GENIC homozygous 46164801 19 54487595 54487596 G A 10 GENIC homozygous 46164802 19 54488039 54488040 T C 16 GENIC homozygous 46164803 19 54488051 54488052 T C 15 GENIC homozygous 46164804 19 54488297 54488317 TCTCACCAGACCACCACTGC -------------------- 12 GENIC homozygous 46410262 19 54488400 54488401 C T 21 GENIC homozygous 46164805 19 54488572 54488573 G T 20 GENIC homozygous 46164806 19 54488785 54488786 G A 13 GENIC homozygous 46164808 19 54489018 54489019 C T 23 GENIC homozygous 46164810 19 54489044 54489045 A G 23 GENIC homozygous 46164811 19 54490308 54490309 A G 28 GENIC homozygous 46164813 19 54490389 54490390 C A 22 GENIC homozygous 46164814 19 54490407 54490408 C T 22 GENIC homozygous 46164815 19 54490499 54490500 A - 24 GENIC homozygous 46164816 19 54490803 54490804 T A 29 GENIC homozygous 46164818 19 54491326 54491327 T TA 17 GENIC possibly homozygous 46164819 19 54491453 54491454 C T 31 GENIC homozygous 46164820 19 54491523 54491524 T - 20 GENIC homozygous 46164821 19 54491598 54491599 T G 31 GENIC homozygous 46164822 19 54491649 54491650 G A 35 GENIC homozygous 46164823 19 54491745 54491746 T C 23 GENIC homozygous 46164824 19 54491752 54491753 T C 26 GENIC homozygous 46164825 19 54492197 54492198 C T 22 GENIC homozygous 46164826 19 54492410 54492411 C G 38 GENIC homozygous 46164827 19 54492478 54492479 T C 30 GENIC homozygous 46164828 19 54492718 54492719 C T 29 GENIC homozygous 46164829 19 54493063 54493064 T G 24 GENIC homozygous 46164830 19 54493081 54493082 T C 17 GENIC homozygous 46164831 19 54493124 54493125 G - 2 GENIC homozygous 46164832 19 54493244 54493245 C G 24 GENIC homozygous 46164834 19 54493277 54493278 G A 17 GENIC homozygous 46296728 19 54493802 54493803 G A 18 GENIC homozygous 46164835 19 54493854 54493855 G GA 12 GENIC homozygous 46296730 19 54494211 54494212 G A 38 GENIC homozygous 46164836 19 54494214 54494215 C T 39 GENIC homozygous 46164837 19 54494297 54494298 T C 31 GENIC homozygous 46164838 19 54494385 54494389 GCTA ---- 36 GENIC homozygous 46164839 19 54494897 54494898 T G 23 GENIC homozygous 46164840 19 54495499 54495500 C A 21 GENIC homozygous 46164841 19 54495537 54495538 G C 21 GENIC homozygous 46164842 19 54496135 54496136 T A 23 GENIC homozygous 46296731 19 54496444 54496445 A T 14 GENIC homozygous 46164844 19 54497659 54497660 A G 21 GENIC homozygous 46164848 19 54497979 54497980 C A 33 GENIC homozygous 46164850 19 54499892 54499893 A G 20 GENIC homozygous 46164852 19 54500924 54500925 T TGTGTGTGTGTGTGTGCGTGCGTGCGTGC 2 GENIC homozygous 46410264 19 54500996 54500997 C T 18 GENIC homozygous 46164856 19 54502741 54502742 G C 37 GENIC homozygous 46296733 19 54503255 54503256 T C 27 GENIC homozygous 46164861 19 54503582 54503583 G C 31 GENIC homozygous 46296734 19 54503604 54503605 T C 32 GENIC homozygous 46164862 19 54504213 54504214 T C 28 GENIC homozygous 46164864 19 54505738 54505743 ATGAC ----- 15 GENIC homozygous 46296735 19 54506429 54506430 T C 17 GENIC homozygous 46164866 19 54506985 54506986 A G 34 GENIC homozygous 46164867 19 54507261 54507262 T TACATACATAC 7 GENIC homozygous 46431531 19 54507561 54507562 A AT 10 GENIC homozygous 46164872 19 54507659 54507660 A AT 9 GENIC homozygous 46164875 19 54507758 54507759 C CAG 10 GENIC homozygous 46164876 19 54508151 54508152 A G 20 GENIC homozygous 46164877 19 54508402 54508403 G A 13 GENIC homozygous 46296736 19 54508700 54508701 G GA 7 GENIC possibly homozygous 46296737 19 54508796 54508797 G T 9 GENIC homozygous 46164878 19 54508798 54508799 G T 9 GENIC homozygous 46164879 19 54508799 54508800 G T 9 GENIC homozygous 46164880 19 54508801 54508802 A AAC 3 GENIC heterozygous 46410270 19 54509335 54509336 A G 45 GENIC homozygous 46164883 19 54513308 54513309 A ACACT 15 GENIC homozygous 46164888 19 54513425 54513471 ACACACTACACACACACACTCACTACACACTACACACACACACTAG ---------------------------------------------- 5 GENIC homozygous 46410272 19 54513537 54513539 AC -- 25 GENIC homozygous 46164901 19 54514266 54514267 C T 30 GENIC homozygous 46296738 19 54515151 54515152 A AAAAACAAACAAACCTGATTC 24 GENIC homozygous 46164906 19 54515468 54515469 A G 13 GENIC homozygous 46164909 19 54515552 54515554 AA -- 1 GENIC homozygous 46213834 19 54516457 54516458 A G 21 GENIC homozygous 46263099 19 54516642 54516643 C T 13 GENIC homozygous 46296739 19 54516950 54516951 A G 24 GENIC homozygous 46263100 19 54517750 54517766 CACACACACACACACA ---------------- 7 GENIC homozygous 46410274 19 54517796 54517797 A AT 14 GENIC homozygous 46164912 19 54518166 54518167 T TTG 27 GENIC homozygous 46296740 19 54521685 54521687 AA -- 8 GENIC heterozygous 46213835 19 54521686 54521687 A - 8 GENIC heterozygous 46164924 19 54522263 54522264 A AGT 8 GENIC homozygous 46164926