chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54462678 54462679 C A 60 GENIC homozygous 46164750 19 54464636 54464637 C G 52 GENIC homozygous 46164751 19 54465813 54465814 C T 23 GENIC possibly homozygous 46164752 19 54465820 54465824 GCGT ---- 21 GENIC homozygous 46164753 19 54465989 54465990 T C 55 GENIC homozygous 46164754 19 54468206 54468207 A G 47 GENIC homozygous 46164755 19 54468380 54468381 G GAA 24 GENIC heterozygous 46213826 19 54468388 54468389 G GAA 12 GENIC heterozygous 46164756 19 54468388 54468389 G GAAA 12 GENIC possibly homozygous 46164757 19 54469284 54469285 G A 67 GENIC homozygous 46164758 19 54469482 54469483 G A 63 GENIC homozygous 46164759 19 54469785 54469786 T C 71 GENIC homozygous 46164760 19 54471232 54471233 A C 56 GENIC homozygous 46164761 19 54471457 54471458 C G 29 GENIC homozygous 46164762 19 54471471 54471472 C G 33 GENIC homozygous 46164763 19 54471474 54471475 A AG 29 GENIC homozygous 46164764 19 54472892 54472893 C CT 39 GENIC homozygous 46164765 19 54473181 54473182 C T 77 GENIC possibly homozygous 46164766 19 54473759 54473760 A - 2 GENIC homozygous 46213827 19 54473870 54473871 G A 49 GENIC homozygous 46164767 19 54474371 54474375 AAAA ---- 51 GENIC heterozygous 46164768 19 54474375 54474379 AAAC ---- 37 GENIC homozygous 46164769 19 54475177 54475178 T C 54 GENIC possibly homozygous 46164770 19 54475180 54475181 T TTG 29 GENIC possibly homozygous 46164771 19 54475180 54475181 T TTGTG 29 GENIC heterozygous 46213828 19 54475996 54475997 C CGT 34 GENIC possibly homozygous 46164772 19 54476957 54476958 C A 38 GENIC homozygous 46164773 19 54478511 54478512 A G 52 GENIC homozygous 46164774 19 54478984 54478985 T C 63 GENIC homozygous 46164775 19 54479382 54479383 A AG 80 GENIC homozygous 46164776 19 54479863 54479864 T G 57 GENIC possibly homozygous 46164777 19 54480156 54480157 T TCATTTA 22 GENIC homozygous 46164778 19 54480240 54480241 C CA 38 GENIC homozygous 46164779 19 54481088 54481089 C T 45 GENIC homozygous 46164780 19 54481626 54481627 C T 47 GENIC homozygous 46164781 19 54481704 54481705 A AAC 4 GENIC homozygous 46213829 19 54481815 54481816 A - 1 GENIC homozygous 46213830 19 54481989 54481990 T A 46 GENIC homozygous 46164782 19 54482724 54482725 G A 20 GENIC homozygous 46213831 19 54482791 54482792 A G 46 GENIC possibly homozygous 46164783 19 54482806 54482807 T C 57 GENIC homozygous 46164784 19 54483413 54483414 T C 74 GENIC homozygous 46164785 19 54483485 54483486 G A 73 GENIC homozygous 46164786 19 54483705 54483706 C T 71 GENIC homozygous 46164787 19 54485427 54485428 T C 63 GENIC possibly homozygous 46164788 19 54486002 54486003 T - 68 GENIC homozygous 46164789 19 54486113 54486114 T G 55 GENIC possibly homozygous 46164790 19 54486121 54486122 C CT 13 GENIC heterozygous 46164791 19 54486121 54486122 C CTT 13 GENIC heterozygous 46164792 19 54486467 54486468 C A 59 GENIC possibly homozygous 46164793 19 54486510 54486511 G GA 59 GENIC homozygous 46164794 19 54486668 54486669 T G 58 GENIC homozygous 46164795 19 54486736 54486737 C T 55 GENIC possibly homozygous 46164796 19 54486829 54486830 G A 54 GENIC homozygous 46164797 19 54486948 54486949 A C 55 GENIC homozygous 46164798 19 54487487 54487488 G T 65 GENIC homozygous 46164799 19 54487501 54487502 C T 61 GENIC homozygous 46164800 19 54487507 54487508 C A 63 GENIC homozygous 46164801 19 54487595 54487596 G A 20 GENIC homozygous 46164802 19 54488039 54488040 T C 61 GENIC homozygous 46164803 19 54488051 54488052 T C 64 GENIC homozygous 46164804 19 54488357 54488358 T A 44 GENIC heterozygous 46213832 19 54488400 54488401 C T 56 GENIC possibly homozygous 46164805 19 54488572 54488573 G T 74 GENIC homozygous 46164806 19 54488781 54488782 G A 12 GENIC possibly homozygous 46164807 19 54488785 54488786 G A 13 GENIC heterozygous 46164808 19 54489018 54489019 C T 55 GENIC homozygous 46164810 19 54489044 54489045 A G 58 GENIC homozygous 46164811 19 54489431 54489432 G A 40 GENIC homozygous 46164812 19 54490308 54490309 A G 78 GENIC homozygous 46164813 19 54490389 54490390 C A 60 GENIC homozygous 46164814 19 54490546 54490547 T TCA 66 GENIC homozygous 46164817 19 54490407 54490408 C T 64 GENIC homozygous 46164815 19 54490499 54490500 A - 55 GENIC homozygous 46164816 19 54490803 54490804 T A 57 GENIC homozygous 46164818 19 54491326 54491327 T TA 44 GENIC homozygous 46164819 19 54491453 54491454 C T 71 GENIC homozygous 46164820 19 54491523 54491524 T - 75 GENIC homozygous 46164821 19 54491598 54491599 T G 53 GENIC homozygous 46164822 19 54491649 54491650 G A 76 GENIC homozygous 46164823 19 54491745 54491746 T C 61 GENIC homozygous 46164824 19 54491752 54491753 T C 58 GENIC homozygous 46164825 19 54492197 54492198 C T 58 GENIC homozygous 46164826 19 54492410 54492411 C G 48 GENIC homozygous 46164827 19 54492478 54492479 T C 54 GENIC homozygous 46164828 19 54492718 54492719 C T 58 GENIC possibly homozygous 46164829 19 54493063 54493064 T G 39 GENIC homozygous 46164830 19 54493081 54493082 T C 45 GENIC homozygous 46164831 19 54493124 54493125 G - 36 GENIC possibly homozygous 46164832 19 54493129 54493130 T C 43 GENIC possibly homozygous 46164833 19 54493244 54493245 C G 43 GENIC possibly homozygous 46164834 19 54493802 54493803 G A 42 GENIC homozygous 46164835 19 54494211 54494212 G A 64 GENIC homozygous 46164836 19 54494214 54494215 C T 67 GENIC homozygous 46164837 19 54494297 54494298 T C 60 GENIC homozygous 46164838 19 54494385 54494389 GCTA ---- 43 GENIC homozygous 46164839 19 54494897 54494898 T G 48 GENIC homozygous 46164840 19 54495499 54495500 C A 47 GENIC homozygous 46164841 19 54495537 54495538 G C 45 GENIC homozygous 46164842 19 54496026 54496027 G A 49 GENIC homozygous 46164843 19 54496444 54496445 A T 81 GENIC homozygous 46164844 19 54496655 54496656 G A 81 GENIC possibly homozygous 46164845 19 54497120 54497121 G A 30 GENIC heterozygous 46164846 19 54497407 54497408 G A 61 GENIC homozygous 46164847 19 54497659 54497660 A G 74 GENIC homozygous 46164848 19 54497737 54497738 C T 70 GENIC homozygous 46164849 19 54497979 54497980 C A 55 GENIC homozygous 46164850 19 54498652 54498653 G T 38 GENIC homozygous 46164851 19 54499892 54499893 A G 61 GENIC homozygous 46164852 19 54500705 54500706 T C 64 GENIC possibly homozygous 46164853 19 54500918 54500919 G T 28 GENIC possibly homozygous 46164854 19 54500993 54500994 T C 50 GENIC possibly homozygous 46164855 19 54500996 54500997 C T 50 GENIC homozygous 46164856 19 54501067 54501068 T A 61 GENIC homozygous 46164857 19 54501354 54501355 G T 50 GENIC homozygous 46164858 19 54501877 54501878 C T 67 GENIC possibly homozygous 46164859 19 54502284 54502285 A ATT 45 GENIC homozygous 46164860 19 54503255 54503256 T C 44 GENIC homozygous 46164861 19 54503604 54503605 T C 69 GENIC homozygous 46164862 19 54504113 54504114 C T 43 GENIC homozygous 46164863 19 54504213 54504214 T C 51 GENIC homozygous 46164864 19 54505338 54505346 ACACACAC -------- 8 GENIC homozygous 46164865 19 54506429 54506430 T C 58 GENIC homozygous 46164866 19 54506985 54506986 A G 61 GENIC homozygous 46164867 19 54507162 54507163 A G 62 GENIC homozygous 46164868 19 54507260 54507268 ATATATAT -------- 26 GENIC homozygous 46164869 19 54507271 54507272 T C 36 GENIC possibly homozygous 46164870 19 54507275 54507276 T G 39 GENIC possibly homozygous 46164871 19 54507561 54507562 A AT 28 GENIC possibly homozygous 46164872 19 54507590 54507591 A - 24 GENIC homozygous 46164873 19 54507613 54507614 G - 26 GENIC homozygous 46164874 19 54507659 54507660 A AT 21 GENIC homozygous 46164875 19 54507758 54507759 C CAG 33 GENIC homozygous 46164876 19 54508151 54508152 A G 70 GENIC homozygous 46164877 19 54508796 54508797 G T 26 GENIC homozygous 46164878 19 54508798 54508799 G T 26 GENIC homozygous 46164879 19 54508799 54508800 G T 26 GENIC homozygous 46164880 19 54509088 54509089 A G 84 GENIC possibly homozygous 46164881 19 54509214 54509215 C - 39 GENIC homozygous 46164882 19 54509335 54509336 A G 67 GENIC homozygous 46164883 19 54513226 54513227 C A 3 GENIC homozygous 46164884 19 54513292 54513293 T - 11 GENIC heterozygous 46164886 19 54513300 54513309 ACACACACA --------- 11 GENIC heterozygous 46164887 19 54513308 54513309 A ACACT 10 GENIC heterozygous 46164888 19 54513312 54513313 T - 11 GENIC heterozygous 46164889 19 54513332 54513335 TAG --- 12 GENIC heterozygous 46164891 19 54513414 54513421 CACTACA ------- 4 GENIC homozygous 46164899 19 54513370 54513371 A G 6 GENIC heterozygous 46213833 19 54513376 54513377 T A 4 GENIC homozygous 46164894 19 54513387 54513388 T - 3 GENIC homozygous 46164896 19 54513406 54513414 CACACACT -------- 4 GENIC heterozygous 46164898 19 54513537 54513539 AC -- 24 GENIC homozygous 46164901 19 54514298 54514302 CTTA ---- 42 GENIC possibly homozygous 46164902 19 54514302 54514306 CTTG ---- 38 GENIC homozygous 46164903 19 54514656 54514657 T - 66 GENIC homozygous 46164904 19 54515107 54515108 A G 31 GENIC possibly homozygous 46164905 19 54515151 54515152 A AAAAACAAACAAACCTGATTC 18 GENIC homozygous 46164906 19 54515403 54515404 G GA 14 GENIC possibly homozygous 46164907 19 54515413 54515414 G - 31 GENIC heterozygous 46164908 19 54515468 54515469 A G 32 GENIC homozygous 46164909 19 54515552 54515554 AA -- 11 GENIC heterozygous 46213834 19 54515553 54515554 A - 11 GENIC possibly homozygous 46164910 19 54517749 54517750 G GCA 4 GENIC homozygous 46164911 19 54517796 54517797 A AT 20 GENIC homozygous 46164912 19 54518149 54518150 G GT 62 GENIC homozygous 46164913 19 54518292 54518293 A G 53 GENIC homozygous 46164915 19 54518521 54518522 G C 65 GENIC possibly homozygous 46164916 19 54518597 54518598 C A 55 GENIC homozygous 46164917 19 54519424 54519427 AGA --- 76 GENIC homozygous 46164918 19 54519433 54519434 T C 82 GENIC homozygous 46164919 19 54521505 54521506 G A 48 GENIC possibly homozygous 46164920 19 54521674 54521675 C T 44 GENIC homozygous 46164921 19 54521683 54521685 AG -- 34 GENIC heterozygous 46164922 19 54521684 54521685 G - 36 GENIC heterozygous 46164923 19 54521685 54521687 AA -- 22 GENIC heterozygous 46213835 19 54521686 54521687 A - 22 GENIC possibly homozygous 46164924 19 54522263 54522264 A AGT 19 GENIC heterozygous 46164926 19 54522421 54522422 A C 70 GENIC homozygous 46164927 19 54522555 54522556 T TG 55 GENIC homozygous 46164928 19 54522782 54522783 G C 59 GENIC homozygous 46164929