chr start stop reference nuc variant nuc depth genic status zygosity variant ID 18 56194005 56194006 T C 21 INTERGENIC homozygous 46468479 18 56194351 56194352 G T 20 GENIC homozygous 46738359 18 56195478 56195479 C CT 3 INTERGENIC homozygous 46468483 18 56196094 56196095 C - 17 INTERGENIC homozygous 46468485 18 56196492 56196493 C T 21 INTERGENIC homozygous 46738361 18 56197870 56197871 T G 15 INTERGENIC homozygous 46468499 18 56199574 56199575 T A 21 INTERGENIC homozygous 46738363 18 56201456 56201457 C A 22 INTERGENIC homozygous 46738365 18 56202342 56202343 T A 4 INTERGENIC homozygous 46468515 18 56202454 56202458 AAAT ---- 1 INTERGENIC homozygous 46910763 18 56204887 56204888 T C 13 INTERGENIC homozygous 46468525 18 56206357 56206358 T C 24 INTERGENIC homozygous 46468531 18 56206453 56206459 GTGTGT ------ 2 INTERGENIC homozygous 46848044 18 56207205 56207206 C - 28 INTERGENIC homozygous 46468534 18 56207839 56207857 TGTGTGTGTGTGTGTGTG ------------------ 8 INTERGENIC homozygous 46912338 18 56208859 56208860 G - 10 INTERGENIC homozygous 46468540 18 56209250 56209258 GTGTGTGT -------- 8 INTERGENIC heterozygous 46921009 18 56209252 56209258 GTGTGT ------ 8 INTERGENIC heterozygous 46738367 18 56209289 56209290 A G 17 INTERGENIC homozygous 46468550 18 56209814 56209815 A C 17 INTERGENIC homozygous 46738369 18 56210046 56210047 T - 19 INTERGENIC homozygous 46468556 18 56210125 56210126 T C 27 INTERGENIC homozygous 46468558 18 56210225 56210226 G A 31 INTERGENIC homozygous 46468560 18 56210294 56210295 C T 22 INTERGENIC homozygous 46468562 18 56210378 56210379 C T 29 INTERGENIC homozygous 46738371 18 56210397 56210401 TCTG ---- 21 INTERGENIC possibly homozygous 46468566 18 56210653 56210654 C A 19 INTERGENIC homozygous 46738375 18 56210716 56210717 C T 24 INTERGENIC homozygous 46738377 18 56210813 56210814 T G 20 INTERGENIC homozygous 46468569 18 56211381 56211382 G A 18 INTERGENIC homozygous 46468579 18 56211476 56211477 A G 24 INTERGENIC homozygous 46468583 18 56211752 56211753 C - 8 INTERGENIC homozygous 46468585 18 56211902 56211903 G - 14 INTERGENIC homozygous 46608535 18 56211978 56211979 T G 8 INTERGENIC homozygous 46468589 18 56212220 56212221 A C 15 INTERGENIC homozygous 46468591 18 56212261 56212262 A G 14 INTERGENIC homozygous 46738379 18 56212659 56212660 G A 22 INTERGENIC homozygous 46468593 18 56212981 56212982 A - 21 INTERGENIC homozygous 46738381 18 56212984 56212985 A G 20 INTERGENIC homozygous 46912340 18 56213470 56213476 CTTCTC ------ 27 INTERGENIC homozygous 46898165 18 56213476 56213477 T TG 26 INTERGENIC homozygous 46898166 18 56213478 56213479 G GC 28 INTERGENIC homozygous 46893270 18 56213480 56213481 A AAT 27 INTERGENIC homozygous 46893271 18 56213502 56213503 T C 24 INTERGENIC homozygous 46468601 18 56213928 56213929 T TC 12 INTERGENIC homozygous 46468603 18 56213931 56213932 T C 10 INTERGENIC homozygous 46912341 18 56214206 56214207 G T 10 INTERGENIC homozygous 46468605 18 56214215 56214216 T C 9 INTERGENIC homozygous 46468607 18 56214216 56214217 G A 9 INTERGENIC homozygous 46468608 18 56214241 56214242 C T 8 INTERGENIC homozygous 46468610 18 56214553 56214554 G T 4 INTERGENIC homozygous 46893272 18 56214554 56214555 T C 4 INTERGENIC homozygous 46468612 18 56214587 56214588 G A 7 INTERGENIC homozygous 46468613 18 56214685 56214686 C A 26 INTERGENIC homozygous 46738383 18 56215062 56215178 AAAACTGAACAGAAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGATCCCCAGCTCCGAAAAAAAGAACCAAAAAAAAAAAAAAA -------------------------------------------------------------------------------------------------------------------- 24 INTERGENIC homozygous 46795940 18 56215672 56215673 T C 22 INTERGENIC homozygous 46468621 18 56216017 56216018 A C 17 INTERGENIC homozygous 46468623 18 56216368 56216369 G A 22 INTERGENIC homozygous 46468625 18 56216407 56216408 C G 23 INTERGENIC homozygous 46468627 18 56216529 56216530 C T 8 INTERGENIC homozygous 46468629 18 56216556 56216557 G T 7 INTERGENIC homozygous 46738385 18 56216588 56216589 A - 2 INTERGENIC homozygous 46468631 18 56216603 56216604 C CAAAAAA 3 INTERGENIC homozygous 46921011 18 56216618 56216619 T A 9 INTERGENIC homozygous 46468635 18 56216785 56216786 T C 16 INTERGENIC homozygous 46738387 18 56217160 56217161 T - 12 INTERGENIC homozygous 46468637 18 56217554 56217555 C T 11 INTERGENIC homozygous 46738389 18 56217586 56217587 G A 18 INTERGENIC homozygous 46738391 18 56219819 56219820 T C 23 INTERGENIC homozygous 46468639 18 56220566 56220567 A G 21 INTERGENIC homozygous 46468643 18 56220936 56220937 C T 26 INTERGENIC homozygous 46468645 18 56221579 56221580 T C 19 INTERGENIC homozygous 46468647 18 56221827 56221828 C - 12 INTERGENIC homozygous 46468649 18 56222932 56222933 A AC 13 INTERGENIC possibly homozygous 46738393 18 56222996 56222997 A G 20 INTERGENIC homozygous 46738395 18 56223174 56223261 AAAAAAGAGAAAGCAACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGACCCAAAAAAAAAAAAAAAAAAA --------------------------------------------------------------------------------------- 15 INTERGENIC homozygous 46795942 18 56223407 56223408 T C 14 INTERGENIC homozygous 46738397 18 56223752 56223753 A - 2 INTERGENIC homozygous 46468657 18 56224708 56224709 G GGTGT 5 INTERGENIC heterozygous 46818338 18 56225096 56225097 G GCA 5 INTERGENIC heterozygous 46468661 18 56225554 56225555 A G 24 INTERGENIC homozygous 46468663 18 56225799 56225800 C T 24 INTERGENIC homozygous 46738399 18 56226023 56226026 AAA --- 7 INTERGENIC possibly homozygous 46738401 18 56226086 56226087 A G 16 INTERGENIC homozygous 46468667 18 56227383 56227384 T TAAAAAATATTTTAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCTCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAATCAAAAAA 15 INTERGENIC homozygous 46921013 18 56228038 56228039 C G 15 INTERGENIC homozygous 46468671 18 56228606 56228607 G A 12 INTERGENIC homozygous 46468675 18 56230179 56230180 C T 29 INTERGENIC homozygous 46468677 18 56232265 56232266 A G 16 INTERGENIC homozygous 46468681 18 56234162 56234163 C CCA 2 INTERGENIC homozygous 46468685 18 56235562 56235563 C CA 10 INTERGENIC possibly homozygous 46608539 18 56235756 56235757 G A 21 INTERGENIC possibly homozygous 46468689 18 56237660 56237661 C T 23 INTERGENIC homozygous 46468691 18 56237739 56237740 G C 18 INTERGENIC homozygous 46738403 18 56238571 56238572 T C 32 INTERGENIC homozygous 46468693 18 56238574 56238575 C T 32 INTERGENIC homozygous 46738405 18 56238683 56238684 C T 18 INTERGENIC homozygous 46468695 18 56241184 56241185 C G 1 GENIC homozygous 46468697 18 56241188 56241189 T TGAG 1 GENIC homozygous 46818341 18 56241189 56241190 T TCTGGTAAGAGGAGGAGGAGG 1 GENIC homozygous 46818342 18 56241394 56241397 GGT --- 3 GENIC homozygous 46912342 18 56241439 56241440 G T 12 GENIC homozygous 46468703 18 56241455 56241456 A C 11 GENIC homozygous 46468705 18 56241556 56241557 A G 7 GENIC homozygous 46468707 18 56241919 56241920 G C 14 GENIC homozygous 46468711 18 56242030 56242031 T C 13 GENIC homozygous 46738407 18 56242088 56242089 T C 10 GENIC homozygous 46468713 18 56242145 56242146 A G 13 GENIC homozygous 46468715 18 56242156 56242157 T TG 15 GENIC homozygous 46468717 18 56242190 56242191 T C 14 GENIC homozygous 46468719 18 56242232 56242233 G A 11 GENIC homozygous 46468721 18 56242283 56242284 C T 12 GENIC homozygous 46468723 18 56242529 56242530 C T 7 GENIC homozygous 46468725 18 56242843 56242844 A G 15 GENIC homozygous 46468727 18 56242957 56242958 A G 27 GENIC homozygous 46468729 18 56243128 56243129 A G 23 GENIC homozygous 46468731 18 56243172 56243173 G A 24 GENIC homozygous 46468733 18 56243216 56243217 C G 26 GENIC homozygous 46468735 18 56243218 56243219 T C 26 GENIC homozygous 46468737 18 56243250 56243251 T C 30 GENIC homozygous 46893274 18 56243251 56243252 G T 30 GENIC homozygous 46893275 18 56243367 56243368 G A 27 GENIC homozygous 46468741 18 56243553 56243554 A C 26 GENIC homozygous 46468745 18 56243576 56243577 A G 23 GENIC homozygous 46468747 18 56243636 56243637 A G 16 GENIC homozygous 46468749 18 56243782 56243783 T C 28 GENIC homozygous 46468751 18 56243884 56243885 A T 23 GENIC homozygous 46738411 18 56244124 56244125 A G 29 GENIC homozygous 46738413 18 56244151 56244152 G A 23 GENIC homozygous 46468753 18 56244232 56244233 C T 15 GENIC homozygous 46738415 18 56244455 56244456 A AAGG 22 GENIC homozygous 46468755 18 56244495 56244496 T C 19 GENIC homozygous 46468757 18 56244511 56244512 T C 17 GENIC homozygous 46468759 18 56244522 56244523 T C 14 GENIC homozygous 46468761 18 56244525 56244526 T G 14 GENIC homozygous 46468763 18 56244581 56244582 T C 9 GENIC homozygous 46468765 18 56244593 56244594 T C 8 GENIC homozygous 46468767 18 56245047 56245048 T G 13 INTERGENIC homozygous 46468769 18 56245058 56245059 A G 16 INTERGENIC homozygous 46468771 18 56245541 56245542 A C 14 INTERGENIC homozygous 46468773 18 56245586 56245588 CA -- 2 INTERGENIC heterozygous 46468775 18 56245739 56245740 A C 11 INTERGENIC homozygous 46468777 18 56245770 56245772 GG -- 11 INTERGENIC homozygous 46468779 18 56245777 56245778 T TG 6 INTERGENIC homozygous 46468781 18 56245780 56245781 T G 6 INTERGENIC homozygous 46921015 18 56245965 56245966 A C 6 INTERGENIC homozygous 46468787 18 56245808 56245809 A G 6 INTERGENIC homozygous 46468783 18 56245932 56245933 C T 11 INTERGENIC homozygous 46468785 18 56245981 56245982 A G 7 INTERGENIC homozygous 46468789 18 56246016 56246017 A T 13 INTERGENIC homozygous 46468791 18 56246252 56246253 T G 20 INTERGENIC homozygous 46468793 18 56246864 56246865 C T 23 INTERGENIC homozygous 46468795 18 56246941 56246942 T C 32 INTERGENIC homozygous 46738417 18 56246988 56247000 AGAGAGAGAGAG ------------ 26 INTERGENIC homozygous 46893276 18 56247012 56247026 AGAGACAGAGACAG -------------- 35 INTERGENIC homozygous 46893277 18 56247281 56247282 G A 25 INTERGENIC homozygous 46738419 18 56247520 56247521 A G 16 INTERGENIC homozygous 46738421 18 56247634 56247646 TCCTTCCTTCCC ------------ 8 INTERGENIC possibly homozygous 46921017 18 56247782 56247783 A G 24 INTERGENIC homozygous 46468817 18 56248177 56248178 C T 26 INTERGENIC homozygous 46738427 18 56248923 56248924 A G 15 INTERGENIC homozygous 46738429 18 56250043 56250044 C - 5 GENIC heterozygous 46468819 18 56250045 56250049 CAAA ---- 7 GENIC heterozygous 46938392 18 56250127 56250130 AAC --- 19 GENIC homozygous 46738431 18 56251123 56251124 T C 25 GENIC homozygous 46468827 18 56252399 56252400 G A 9 GENIC homozygous 46738433 18 56252604 56252605 G C 9 GENIC homozygous 46468833 18 56253501 56253502 T G 10 GENIC homozygous 46468839 18 56254428 56254429 T TA 14 GENIC homozygous 46468843 18 56254602 56254603 A G 19 GENIC homozygous 46468845 18 56254889 56254890 G A 11 GENIC homozygous 46468849 18 56255373 56255374 A G 16 GENIC homozygous 46468851 18 56255732 56255734 AC -- 2 GENIC homozygous 46859406 18 56255762 56255766 AGGG ---- 10 GENIC homozygous 46912343 18 56255881 56255883 TT -- 10 GENIC possibly homozygous 46898176 18 56255893 56255894 T G 12 GENIC possibly homozygous 46893280 18 56256259 56256260 C T 14 GENIC homozygous 46468861 18 56256302 56256303 A G 16 GENIC homozygous 46738439 18 56256736 56256737 G GATTT 12 GENIC possibly homozygous 46738441 18 56256830 56256832 CC -- 7 GENIC homozygous 46738443 18 56256833 56256841 GCCCCTAC -------- 9 GENIC homozygous 46738445 18 56256881 56256891 GTCTGGTCTG ---------- 6 GENIC homozygous 46738447 18 56257188 56257189 T C 27 GENIC homozygous 46738449 18 56257776 56257777 C T 25 GENIC homozygous 46468873 18 56258103 56258104 T C 24 GENIC homozygous 46468877 18 56258653 56258654 C - 29 GENIC homozygous 46738451 18 56258704 56258705 C G 21 GENIC homozygous 46468879 18 56259024 56259025 A - 16 GENIC homozygous 46738453 18 56259292 56259293 T C 6 GENIC homozygous 46468883 18 56260279 56260280 A G 15 INTERGENIC homozygous 46468885 18 56260888 56260893 TTTTG ----- 18 INTERGENIC homozygous 46468887 18 56261096 56261097 T TAAACA 17 INTERGENIC homozygous 46738455 18 56264864 56264865 T C 30 INTERGENIC homozygous 46738459 18 56261726 56261727 A ATTTT 12 INTERGENIC homozygous 46738457 18 56261840 56261841 A G 15 INTERGENIC homozygous 46468895 18 56264279 56264280 T C 18 INTERGENIC homozygous 46468903 18 56265426 56265427 T C 17 INTERGENIC homozygous 46738461 18 56265625 56265626 A G 28 INTERGENIC homozygous 46468917 18 56266136 56266137 C CTAAT 26 INTERGENIC homozygous 46468921 18 56266154 56266155 C A 28 INTERGENIC homozygous 46738463 18 56266277 56266278 C T 19 INTERGENIC homozygous 46468925 18 56266522 56266523 G GCACACTGC 27 GENIC homozygous 46468927 18 56266558 56266559 C T 32 GENIC homozygous 46738465 18 56267617 56267618 C CAG 26 GENIC homozygous 46468929 18 56268209 56268210 G A 38 GENIC homozygous 46468931 18 56268777 56268778 A G 29 GENIC homozygous 46468933 18 56270448 56270449 A G 18 GENIC homozygous 46468935 18 56270756 56270757 T C 18 GENIC homozygous 46738467 18 56271058 56271059 C T 32 GENIC homozygous 46738469 18 56271515 56271516 C T 23 GENIC homozygous 46738471 18 56271524 56271525 T A 23 GENIC homozygous 46468943 18 56271574 56271575 G A 6 GENIC heterozygous 46738473 18 56271583 56271584 T A 11 GENIC homozygous 46468945 18 56271646 56271647 T TC 24 GENIC homozygous 46468947 18 56271652 56271653 C T 26 GENIC homozygous 46738475 18 56271670 56271671 C T 21 GENIC homozygous 46738477 18 56271707 56271708 A T 23 GENIC homozygous 46468953 18 56271761 56271762 T A 22 GENIC homozygous 46468957 18 56273215 56273216 T A 16 GENIC homozygous 46738479 18 56275288 56275290 AG -- 23 GENIC homozygous 46738481 18 56276087 56276088 G A 25 GENIC homozygous 46468973 18 56276116 56276117 T C 25 GENIC homozygous 46468975 18 56276499 56276500 A G 33 GENIC homozygous 46468979 18 56276689 56276692 AAA --- 6 GENIC homozygous 46738483 18 56276930 56276931 A G 24 GENIC homozygous 46468983 18 56277679 56277680 T C 17 GENIC homozygous 46738485 18 56277746 56277747 T TA 21 GENIC homozygous 46468985 18 56277825 56277826 C T 36 GENIC homozygous 46468987 18 56278383 56278384 G C 8 GENIC homozygous 46738487 18 56281347 56281348 C T 28 GENIC homozygous 46738489 18 56281885 56281886 T C 35 GENIC homozygous 46738491 18 56283448 56283449 C T 16 GENIC homozygous 46738493 18 56283650 56283651 T G 24 GENIC homozygous 46469051 18 56284733 56284753 TCTGTCTGTCTGTCTGTCTA -------------------- 25 GENIC homozygous 46921019 18 56285217 56285218 G GT 13 GENIC heterozygous 46469101 18 56285217 56285218 G GTTTTTTTT 13 GENIC heterozygous 46829244 18 56285220 56285221 T - 13 GENIC heterozygous 46818345 18 56285514 56285515 A - 10 GENIC homozygous 46818346 18 56285516 56285517 G GC 10 GENIC homozygous 46469105 18 56285518 56285519 T TG 10 GENIC homozygous 46818347 18 56285519 56285520 C CTAGGCAAGCGCTCTACCA 10 GENIC homozygous 46818348 18 56285529 56285530 G A 6 GENIC homozygous 46818349 18 56285810 56285811 T C 9 GENIC homozygous 46469115 18 56287846 56287847 A C 9 GENIC homozygous 46469157 18 56288136 56288137 G A 7 GENIC homozygous 46738499 18 56288466 56288468 TG -- 10 GENIC heterozygous 46687799 18 56288592 56288593 T TAAAACAAAAC 19 GENIC homozygous 46913703 18 56289235 56289236 G A 16 GENIC homozygous 46738501 18 56289297 56289298 G - 4 GENIC homozygous 46829245 18 56289409 56289435 TCTCTCTCTCTCTCTCTCTCTCTCTC -------------------------- 11 GENIC heterozygous 46921021 18 56289411 56289435 TCTCTCTCTCTCTCTCTCTCTCTC ------------------------ 11 GENIC heterozygous 46921023 18 56290290 56290291 T TA 19 GENIC homozygous 46469167 18 56290662 56290663 A G 36 GENIC homozygous 46469171 18 56291067 56291068 A G 31 GENIC homozygous 46469173 18 56291279 56291291 GGGAGAGAGAGA ------------ 4 GENIC heterozygous 46921025 18 56291280 56291288 GGAGAGAG -------- 4 GENIC heterozygous 46921027 18 56291319 56291323 GAGC ---- 4 GENIC heterozygous 46922931 18 56291321 56291323 GC -- 4 GENIC heterozygous 46921029 18 56291621 56291622 C T 20 GENIC homozygous 46738505 18 56291811 56291812 T C 27 GENIC homozygous 46738507 18 56291871 56291872 T - 27 GENIC homozygous 46469177 18 56292801 56292804 TTT --- 17 GENIC homozygous 46469183 18 56293769 56293770 C T 20 GENIC homozygous 46738509 18 56294353 56294354 C T 12 GENIC homozygous 46738511 18 56294592 56294593 G GC 19 GENIC homozygous 46469187 18 56294976 56294977 C G 14 GENIC homozygous 46469189 18 56295503 56295504 T C 13 GENIC homozygous 46738513 18 56295731 56295732 G C 19 GENIC homozygous 46738515