chr start stop reference nuc variant nuc depth genic status zygosity variant ID 17 52295549 52295550 A G 26 INTERGENIC homozygous 47130773 17 52295911 52295912 A G 61 INTERGENIC homozygous 47591892 17 52296219 52296220 A G 24 INTERGENIC homozygous 47591894 17 52296375 52296376 T C 39 INTERGENIC homozygous 48077144 17 52296823 52296835 AGAAAGAAAGAA ------------ 12 INTERGENIC heterozygous 47742528 17 52296827 52296835 AGAAAGAA -------- 12 INTERGENIC possibly homozygous 48065983 17 52298764 52298765 T C 29 INTERGENIC homozygous 47130776 17 52299733 52299734 G GCACA 10 GENIC possibly homozygous 47888563 17 52299733 52299734 G GCACACA 10 GENIC heterozygous 47809517 17 52300635 52300640 AAACC ----- 10 GENIC homozygous 47809521 17 52301043 52301044 A G 73 GENIC homozygous 47429452 17 52301357 52301358 A G 34 GENIC homozygous 47591900 17 52301359 52301360 C T 34 GENIC homozygous 47591902 17 52301806 52301807 A C 88 GENIC homozygous 47429454 17 52302314 52302315 C T 41 GENIC homozygous 47591904 17 52303306 52303307 T C 3 GENIC homozygous 47429458 17 52303877 52303878 C G 67 GENIC homozygous 47429460 17 52305718 52305719 G A 13 INTERGENIC homozygous 47591906 17 52305781 52305782 C T 18 INTERGENIC homozygous 47591909 17 52306148 52306149 C CACA 62 INTERGENIC homozygous 47591911 17 52306345 52306346 G T 46 INTERGENIC homozygous 47591913 17 52306940 52306941 T C 19 INTERGENIC homozygous 47591915 17 52307005 52307006 G C 30 INTERGENIC homozygous 47130783 17 52307008 52307009 A C 30 INTERGENIC homozygous 47130784 17 52307029 52307030 C - 30 INTERGENIC homozygous 47130785 17 52307143 52307144 C T 30 INTERGENIC homozygous 47591916 17 52307225 52307226 C CT 27 INTERGENIC homozygous 47591918 17 52307333 52307334 C - 3 INTERGENIC homozygous 47809527 17 52308345 52308346 G A 43 INTERGENIC homozygous 47591924 17 52308460 52308461 A G 62 INTERGENIC homozygous 47591926 17 52308492 52308493 T C 65 INTERGENIC homozygous 47429470 17 52308564 52308565 C T 35 INTERGENIC homozygous 47130788 17 52309944 52309948 CACA ---- 9 INTERGENIC heterozygous 47781059 17 52309946 52309948 CA -- 9 INTERGENIC heterozygous 47742530 17 52310316 52310317 A G 33 INTERGENIC homozygous 47591928 17 52310439 52310440 T C 14 INTERGENIC homozygous 47429477 17 52310853 52310854 G A 33 INTERGENIC homozygous 47591930 17 52311127 52311128 G GCA 8 INTERGENIC heterozygous 47809529 17 52311127 52311128 G GCACA 8 INTERGENIC heterozygous 47809531 17 52311272 52311273 C CAAAAAAAAAA 3 INTERGENIC heterozygous 47809533 17 52311272 52311273 C CAAAAAAAA 3 INTERGENIC heterozygous 47921407 17 52312642 52312643 A AG 27 INTERGENIC homozygous 47591932 17 52313673 52313674 C A 37 INTERGENIC homozygous 47130793 17 52315508 52315509 G A 41 INTERGENIC homozygous 47591934 17 52315906 52315907 A - 9 INTERGENIC homozygous 47130795 17 52316393 52316394 T - 17 INTERGENIC homozygous 47130797 17 52317880 52317881 A G 20 INTERGENIC homozygous 47130799 17 52318651 52318652 G A 47 INTERGENIC homozygous 47591938 17 52319508 52319509 G A 41 INTERGENIC homozygous 47591940 17 52319930 52319931 G GTCTCTC 13 INTERGENIC homozygous 47809535 17 52319989 52319990 G C 26 INTERGENIC homozygous 47429497 17 52321173 52321174 C T 34 INTERGENIC homozygous 47130803 17 52321226 52321227 C T 51 INTERGENIC homozygous 47591942 17 52321394 52321395 T C 92 INTERGENIC homozygous 47130807 17 52321543 52321544 G A 47 INTERGENIC homozygous 47429501 17 52321626 52321627 C T 44 INTERGENIC homozygous 47429503 17 52322423 52322424 C T 27 INTERGENIC homozygous 47591944 17 52322576 52322577 G A 42 INTERGENIC homozygous 47591946 17 52322640 52322641 G T 49 INTERGENIC homozygous 47591948 17 52322926 52322927 C T 24 INTERGENIC homozygous 47591950 17 52322990 52322991 C G 21 INTERGENIC homozygous 47130813 17 52324010 52324011 C T 66 INTERGENIC homozygous 47591952 17 52324890 52324891 T C 51 INTERGENIC homozygous 47591954 17 52326849 52326851 TT -- 9 INTERGENIC heterozygous 47542009 17 52326850 52326851 T - 9 INTERGENIC possibly homozygous 47130819 17 52328597 52328598 C T 33 INTERGENIC homozygous 47591959 17 52328694 52328695 G GTT 2 INTERGENIC heterozygous 47781060 17 52329173 52329174 C CT 32 INTERGENIC homozygous 47130821 17 52333883 52333884 C G 29 INTERGENIC homozygous 47130829 17 52335113 52335114 C CT 17 INTERGENIC homozygous 47429536 17 52336681 52336683 TT -- 3 INTERGENIC homozygous 47591961 17 52341612 52341613 T C 19 INTERGENIC homozygous 47130833 17 52342363 52342364 A C 49 INTERGENIC homozygous 47591963 17 52342621 52342622 G A 17 INTERGENIC homozygous 47429544 17 52342626 52342627 A T 17 INTERGENIC homozygous 47591965 17 52342850 52342851 T C 45 INTERGENIC homozygous 47130834 17 52343048 52343049 T C 39 INTERGENIC homozygous 47130835 17 52343058 52343059 T C 37 INTERGENIC homozygous 47130836 17 52344994 52344995 C T 25 INTERGENIC homozygous 47130843 17 52346750 52346751 T TACACACACACACAC 10 INTERGENIC homozygous 47742536 17 52347105 52347106 T A 28 INTERGENIC homozygous 47130844 17 52347329 52347330 T TACACACACACAC 7 INTERGENIC homozygous 47742538 17 52347747 52347748 C T 36 INTERGENIC homozygous 47591972 17 52347801 52347802 C T 33 INTERGENIC homozygous 47130845 17 52347824 52347825 G A 22 INTERGENIC homozygous 47130846 17 52347831 52347832 C A 21 INTERGENIC homozygous 48077145 17 52348057 52348058 T C 38 INTERGENIC homozygous 48077146 17 52349339 52349340 T A 26 INTERGENIC homozygous 48077147 17 52307031 52307032 C T 29 INTERGENIC homozygous 47709833 17 52307335 52307429 CCTTTCCTCCCCCCTCCCTCTATCCTTCCCTCCTGTTTCTCTTCTTTTCTCCTTCCCTCTTCCCTTCTTCCTTCCTCCTTCCTTCTTCCCCCTC ---------------------------------------------------------------------------------------------- 24 INTERGENIC homozygous 47709835 17 52319792 52319800 CTGTGTCT -------- 23 INTERGENIC possibly homozygous 47709837 17 52320045 52320158 CTGTTAATCTTTTTTTTTTTTTCTTTTTTTTTTTGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCCGGTA ----------------------------------------------------------------------------------------------------------------- 30 INTERGENIC homozygous 47709839 17 52311127 52311128 G GCACACA 8 INTERGENIC heterozygous 47856416 17 52353235 52353236 C T 32 GENIC homozygous 47130847 17 52353313 52353314 C T 31 GENIC homozygous 48077148 17 52354987 52354991 AAAA ---- 14 GENIC homozygous 47742540 17 52355000 52355001 A ATCCT 17 GENIC homozygous 47742542 17 52355616 52355617 T C 40 GENIC homozygous 47130853 17 52356743 52356744 C T 39 GENIC homozygous 48077149 17 52356787 52356797 ACACACACAC ---------- 9 GENIC heterozygous 47809543 17 52356789 52356797 ACACACAC -------- 9 GENIC heterozygous 47809545 17 52358186 52358187 G GT 36 GENIC homozygous 47130856 17 52359466 52359467 A AT 9 GENIC homozygous 47130857 17 52359496 52359497 T C 15 GENIC homozygous 47130858 17 52359552 52359553 C T 20 GENIC homozygous 48077150 17 52359778 52359779 T C 19 GENIC homozygous 47130859 17 52361039 52361040 C A 21 GENIC homozygous 48077151 17 52362709 52362710 A G 20 GENIC homozygous 47130864 17 52362900 52362901 T - 18 GENIC homozygous 47130866 17 52364004 52364005 T C 40 GENIC homozygous 47130868 17 52366366 52366367 C CT 11 GENIC homozygous 47130873 17 52368157 52368158 C G 74 GENIC homozygous 47130876 17 52368640 52368641 G C 38 GENIC homozygous 47130877 17 52368727 52368735 ACACACAT -------- 47 GENIC homozygous 47742547 17 52368756 52368764 CACACACC -------- 53 GENIC possibly homozygous 47742549 17 52368776 52368780 CACA ---- 43 GENIC homozygous 47898959 17 52368831 52368833 AC -- 54 GENIC homozygous 47130883 17 52368877 52368878 C A 78 GENIC homozygous 47130884 17 52368887 52368889 CA -- 65 GENIC homozygous 48077152 17 52369016 52369017 G GAC 45 GENIC possibly homozygous 47130887 17 52369073 52369074 A C 21 GENIC homozygous 47809547 17 52369079 52369080 A C 18 GENIC homozygous 47742553 17 52376318 52376319 G A 12 INTERGENIC homozygous 48077153 17 52377194 52377195 A T 24 INTERGENIC homozygous 48077154 17 52377276 52377277 C G 10 INTERGENIC homozygous 48077155 17 52378026 52378027 T - 23 INTERGENIC homozygous 47130912 17 52379858 52379859 T C 21 INTERGENIC homozygous 47130916 17 52381359 52381360 C A 10 INTERGENIC homozygous 47130917 17 52382141 52382142 G A 45 INTERGENIC homozygous 47938665 17 52383581 52383582 A C 39 INTERGENIC homozygous 47130927 17 52384915 52384930 CCTTCACTGTCCATC --------------- 32 INTERGENIC homozygous 48065988 17 52384986 52384987 C - 19 INTERGENIC homozygous 48077156 17 52385135 52385139 TACG ---- 28 INTERGENIC possibly homozygous 47130929 17 52385201 52385202 C T 58 INTERGENIC homozygous 47592003 17 52385813 52385815 AC -- 29 INTERGENIC homozygous 47619569 17 52386493 52386494 G GAGAGAGAGACAGAGAC 20 INTERGENIC heterozygous 47742559 17 52386493 52386494 G GACAGAGAC 20 INTERGENIC heterozygous 47991365 17 52386515 52386516 C CAGAGAGAGACAGAGAGAGACAGAGAG 9 INTERGENIC heterozygous 47742561 17 52386515 52386516 C CAG 9 INTERGENIC heterozygous 47998399 17 52386552 52386553 C CGTGCGTGCGTGT 18 INTERGENIC homozygous 47991366 17 52387745 52387746 A C 30 INTERGENIC homozygous 48077157 17 52388654 52388655 T A 4 INTERGENIC homozygous 48077158 17 52388712 52388713 A T 12 INTERGENIC homozygous 47991367 17 52388948 52388952 AAAC ---- 11 INTERGENIC homozygous 47942616 17 52389851 52389852 A AT 12 INTERGENIC homozygous 48077159 17 52392168 52392169 G A 28 INTERGENIC homozygous 48077160 17 52394489 52394490 G A 57 INTERGENIC homozygous 48077161 17 52395390 52395391 A C 18 INTERGENIC homozygous 47130964 17 52397733 52397734 C G 53 INTERGENIC homozygous 47130972 17 52401683 52401684 G GTT 12 INTERGENIC homozygous 47130992 17 52403012 52403015 GAA --- 22 INTERGENIC heterozygous 48107880 17 52404316 52404317 G A 28 INTERGENIC heterozygous 47131001 17 52404995 52404996 C T 15 INTERGENIC homozygous 48077162 17 52405044 52405045 C CATTTTAGATCCTGGATGGTTTTGTTCAATT 4 INTERGENIC homozygous 47742565 17 52405088 52405089 T G 8 INTERGENIC homozygous 48077163 17 52413445 52413446 C T 35 INTERGENIC homozygous 48077164 17 52415889 52415890 G A 43 INTERGENIC homozygous 47933740 17 52418024 52418028 ATTC ---- 30 INTERGENIC homozygous 48077165 17 52421299 52421300 C CT 13 INTERGENIC homozygous 48077166 17 52422601 52422602 G A 24 INTERGENIC homozygous 48077167 17 52424431 52424432 G C 28 INTERGENIC homozygous 48077168 17 52425982 52425983 A G 29 INTERGENIC homozygous 48077169 17 52427142 52427143 T TTCTCTC 6 INTERGENIC heterozygous 47131043 17 52427142 52427143 T TTCTC 6 INTERGENIC heterozygous 47742569 17 52428440 52428441 T C 47 INTERGENIC homozygous 47131048 17 52428558 52428559 G A 43 INTERGENIC homozygous 48077170 17 52429070 52429071 A - 13 INTERGENIC homozygous 48077171 17 52431146 52431147 G A 46 INTERGENIC homozygous 48077172 17 52432314 52432315 G A 19 INTERGENIC homozygous 47429595 17 52433843 52433844 C CTGGATGACCTCTCTTGCTTTCTTGTTCTCTTGTT 35 INTERGENIC heterozygous 48107882 17 52437671 52437673 AA -- 11 INTERGENIC homozygous 47131067 17 52442015 52442016 A - 24 INTERGENIC homozygous 47131075 17 52442681 52442682 C T 28 INTERGENIC homozygous 48077173 17 52446983 52446984 A G 43 INTERGENIC homozygous 47131082 17 52447098 52447099 A G 25 INTERGENIC homozygous 47131083 17 52447624 52447625 A T 24 INTERGENIC homozygous 47131084 17 52447888 52447889 G A 31 INTERGENIC homozygous 47131085 17 52450495 52450496 T - 4 INTERGENIC homozygous 47131087 17 52452967 52452968 C T 12 INTERGENIC homozygous 48077174 17 52451067 52451068 T G 25 INTERGENIC homozygous 47131088 17 52453071 52453072 A AT 15 INTERGENIC homozygous 47131090 17 52474990 52474991 A AAAAAAAAAAAAAG 1 INTERGENIC homozygous 47888573 17 52475280 52475281 T TGC 31 INTERGENIC homozygous 47592079 17 52506156 52506157 C CT 5 INTERGENIC homozygous 47429617 17 52506305 52506306 C CAT 1 INTERGENIC homozygous 47327560 17 52506345 52506346 C T 3 INTERGENIC homozygous 47429625 17 52506357 52506358 G A 6 INTERGENIC homozygous 47429627 17 52506393 52506394 A T 6 INTERGENIC homozygous 47429629 17 52506435 52506436 T C 10 INTERGENIC homozygous 47429631 17 52506445 52506446 T TG 10 INTERGENIC homozygous 47429633 17 52506503 52506504 G A 12 INTERGENIC homozygous 47429635 17 52506516 52506522 TACATT ------ 12 INTERGENIC homozygous 47429637 17 52520182 52520183 T TTTTTTG 15 INTERGENIC homozygous 47991369 17 52520195 52520196 G T 11 INTERGENIC homozygous 47131102 17 52520224 52520225 G T 10 INTERGENIC homozygous 47131103 17 52531193 52531194 C T 21 INTERGENIC homozygous 48077175 17 52532998 52532999 G C 38 INTERGENIC homozygous 47619593 17 52533178 52533179 C CCT 32 INTERGENIC possibly homozygous 47619595 17 52543574 52543575 A G 30 INTERGENIC homozygous 47131106 17 52544738 52544739 C G 48 INTERGENIC homozygous 47131109 17 52544740 52544741 G - 49 INTERGENIC homozygous 47131110 17 52544745 52544746 G - 45 INTERGENIC homozygous 47131111 17 52544751 52544752 C - 44 INTERGENIC homozygous 47131112 17 52545274 52545275 G A 37 INTERGENIC homozygous 47131114 17 52545923 52545927 ACAC ---- 60 INTERGENIC heterozygous 48077176 17 52546052 52546053 C T 29 INTERGENIC homozygous 48077177 17 52547007 52547008 G A 31 INTERGENIC homozygous 47429655 17 52547176 52547177 A G 11 INTERGENIC homozygous 47131117 17 52547216 52547217 A AT 11 INTERGENIC homozygous 47131118 17 52548339 52548340 C T 78 INTERGENIC homozygous 47429659 17 52548546 52548547 A C 22 INTERGENIC homozygous 47131121 17 52548547 52548548 G C 24 INTERGENIC homozygous 47131122 17 52548694 52548695 C CT 22 INTERGENIC homozygous 47131124 17 52549145 52549146 T C 44 INTERGENIC homozygous 47131125 17 52549437 52549438 A G 73 INTERGENIC homozygous 47131126 17 52549629 52549630 A C 43 INTERGENIC homozygous 47131127 17 52550704 52550706 TG -- 20 INTERGENIC homozygous 47831792 17 52550710 52550712 TG -- 31 INTERGENIC homozygous 47131130 17 52550720 52550726 TCTCTG ------ 15 INTERGENIC homozygous 48077178 17 52550745 52550746 C G 44 INTERGENIC homozygous 48077179 17 52550747 52550748 C G 46 INTERGENIC homozygous 47429665 17 52550879 52550880 T C 8 INTERGENIC heterozygous 47131135 17 52550883 52550884 C T 9 INTERGENIC heterozygous 47131136 17 52551852 52551853 T C 43 INTERGENIC homozygous 47131146 17 52550990 52550991 G GTCTC 46 INTERGENIC homozygous 47131139 17 52551042 52551043 C CTGTGTGTG 11 INTERGENIC heterozygous 47863481 17 52551095 52551096 T C 39 INTERGENIC homozygous 47131143 17 52552105 52552106 A G 28 INTERGENIC homozygous 47131148 17 52552298 52552299 T C 17 INTERGENIC homozygous 47131149 17 52552483 52552484 A G 69 INTERGENIC homozygous 47429671 17 52552888 52552889 G - 43 INTERGENIC homozygous 47131150 17 52553032 52553033 A G 62 INTERGENIC homozygous 47131151 17 52553301 52553302 G A 36 INTERGENIC homozygous 47429675 17 52553730 52553731 G A 18 INTERGENIC homozygous 47429679 17 52554373 52554374 A AG 43 INTERGENIC homozygous 47131155 17 52557543 52557544 G A 21 INTERGENIC homozygous 47429683 17 52557927 52557928 G A 37 INTERGENIC homozygous 48077180 17 52559185 52559186 T C 31 INTERGENIC homozygous 47131161 17 52559433 52559436 TCC --- 20 INTERGENIC homozygous 47131162 17 52559502 52559503 A G 26 INTERGENIC homozygous 47131163 17 52561370 52561371 T TACACGC 32 INTERGENIC homozygous 48077181 17 52561474 52561475 G GT 51 INTERGENIC homozygous 47131167 17 52561884 52561885 C CACACACAG 17 INTERGENIC heterozygous 47991372 17 52562567 52562568 C T 43 INTERGENIC homozygous 47131171 17 52562581 52562582 T TACCCCTCTGCCTGTACCCCTCTGCCTAC 17 INTERGENIC possibly homozygous 48077182 17 52563465 52563466 G A 27 INTERGENIC homozygous 47131173 17 52564035 52564036 T TA 52 INTERGENIC heterozygous 47877587 17 52564036 52564037 G GACACAGACTCTGCACA 52 INTERGENIC heterozygous 47877588 17 52564041 52564042 C CCAT 54 INTERGENIC heterozygous 47877589 17 52564043 52564044 G GAA 55 INTERGENIC heterozygous 47877590 17 52564045 52564046 A AGCTGCCTACTTGGAAGGTTTGCTTCTCATGGCGCAC 54 INTERGENIC heterozygous 47877591 17 52564389 52564390 G A 28 INTERGENIC homozygous 47131174 17 52564804 52564813 GTATGGTTT --------- 38 INTERGENIC homozygous 48077183 17 52565626 52565627 C T 22 INTERGENIC homozygous 47131177 17 52565915 52565916 C T 36 INTERGENIC homozygous 47429704 17 52565947 52565948 C T 44 INTERGENIC homozygous 48077184 17 52568677 52568678 T TGAA 38 INTERGENIC homozygous 47131180