chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
15	47489754	47489755	C	-	23	INTERGENIC	homozygous	48301615
15	47489759	47489760	C	-	23	INTERGENIC	homozygous	48301616
15	47489874	47489875	C	-	14	INTERGENIC	homozygous	48301617
15	47489877	47489959	TGTTCAAACTGTGTACTATTTGGCTGTGCGGGCATTGAAACTACAAAACTCATAGTGTGAACATGAGAAAGACGAGGGGATT	----------------------------------------------------------------------------------	22	INTERGENIC	homozygous	49051277
15	47490091	47490093	AC	--	8	INTERGENIC	heterozygous	49149052
15	47496263	47496265	TG	--	3	GENIC	heterozygous	49149054
15	47505485	47505486	C	CCA	4	GENIC	heterozygous	49085653
15	47505486	47505488	CA	--	4	GENIC	heterozygous	48301644
15	47547460	47547468	GATAGATA	--------	8	GENIC	homozygous	49149055
15	47547567	47547571	TAGA	----	15	GENIC	homozygous	49362108
15	47547686	47547687	C	CAGAT	17	GENIC	possibly homozygous	49427410
15	47549203	47549204	G	GAGAGAGAGAGAGAGAAAGGTAGAGAGAGAGACAGA	1	GENIC	homozygous	49051302
15	47558995	47558996	T	TAC	12	GENIC	heterozygous	49187765
15	47563469	47563470	C	CTGTGTGTG	6	GENIC	heterozygous	49254506
15	47563470	47563472	TG	--	6	GENIC	heterozygous	49051316
15	47569434	47569435	C	CTCCTCTCTCTCTCT	16	GENIC	heterozygous	48954823
15	47588120	47588122	TG	--	22	GENIC	heterozygous	49149059
15	47596799	47596800	T	-	6	GENIC	heterozygous	48301805
15	47596892	47596893	C	CAA	13	GENIC	heterozygous	48301806
15	47596892	47596893	C	CA	13	GENIC	heterozygous	48505913
15	47602316	47602317	C	T	23	GENIC	homozygous	48301819
15	47602579	47602581	GA	--	3	GENIC	heterozygous	49464342
15	47603404	47603405	G	GTTGT	19	GENIC	homozygous	48301824
15	47604079	47604080	A	G	19	GENIC	homozygous	48301826
15	47604153	47604154	G	-	13	GENIC	homozygous	48954827
15	47604307	47604308	G	A	18	GENIC	homozygous	48301828
15	47605318	47605319	T	A	24	GENIC	possibly homozygous	48822684
15	47605510	47605511	A	G	29	GENIC	possibly homozygous	48822686
15	47605653	47605654	G	A	21	GENIC	possibly homozygous	48822688
15	47605756	47605757	T	A	22	GENIC	homozygous	48822690
15	47606425	47606426	G	A	26	GENIC	possibly homozygous	48822692
15	47606432	47606433	C	A	23	GENIC	possibly homozygous	48822694
15	47607858	47607859	T	TAC	6	GENIC	heterozygous	49333820
15	47607859	47607863	ACAC	----	6	GENIC	heterozygous	49254513
15	47607911	47607912	G	A	17	GENIC	possibly homozygous	48822696
15	47608133	47608137	ATAT	----	17	GENIC	homozygous	49191447
15	47609097	47609098	A	AG	30	GENIC	homozygous	48301831
15	47609908	47609910	AA	--	18	GENIC	homozygous	48889379
15	47610842	47610843	A	C	26	GENIC	homozygous	48301833
15	47610923	47610924	A	-	16	GENIC	homozygous	48301835
15	47611499	47611513	ACACACACACACAC	--------------	11	GENIC	homozygous	49362109
15	47612127	47612128	T	C	31	GENIC	homozygous	48301837
15	47612342	47612343	C	T	34	GENIC	possibly homozygous	48301838
15	47612758	47612759	T	TAC	5	GENIC	heterozygous	49326682
15	47613708	47613710	AA	--	15	GENIC	possibly homozygous	49149060
15	47613709	47613710	A	-	15	GENIC	heterozygous	49051358
15	47614571	47614572	G	C	17	GENIC	possibly homozygous	48954831
15	47614761	47614762	G	A	31	GENIC	possibly homozygous	48954833
15	47615049	47615050	A	-	2	GENIC	homozygous	49051360
15	47615156	47615157	A	C	10	GENIC	possibly homozygous	48301842
15	47615571	47615572	C	T	28	GENIC	possibly homozygous	48954835
15	47616551	47616552	A	-	21	GENIC	possibly homozygous	48301844
15	47616786	47616792	ACACAC	------	6	GENIC	heterozygous	49051362
15	47616788	47616792	ACAC	----	6	GENIC	heterozygous	49149061
15	47616912	47616916	CACA	----	21	GENIC	possibly homozygous	49362110
15	47618052	47618053	G	A	15	GENIC	homozygous	49362111
15	47618113	47618114	C	T	25	GENIC	homozygous	48954837
15	47618261	47618262	G	A	24	GENIC	homozygous	48301847
15	47621974	47621975	T	-	14	GENIC	possibly homozygous	49220857
15	47622301	47622302	C	CAA	9	GENIC	heterozygous	48301851
15	47622301	47622302	C	CA	9	GENIC	heterozygous	49362112
15	47622830	47622844	GAGAGAGAGAGAGA	--------------	6	GENIC	heterozygous	49407154
15	47622832	47622844	GAGAGAGAGAGA	------------	6	GENIC	heterozygous	49435417
15	47623250	47623251	G	-	16	GENIC	homozygous	48301855
15	47624036	47624037	G	-	22	GENIC	possibly homozygous	48954841
15	47625422	47625423	G	A	21	GENIC	possibly homozygous	48822706
15	47626144	47626145	C	T	24	GENIC	possibly homozygous	48954843
15	47627837	47627839	AC	--	8	GENIC	heterozygous	49220858
15	47628006	47628007	T	TAAA	4	GENIC	heterozygous	49051371
15	47629728	47629729	A	AT	28	GENIC	homozygous	48954845
15	47629730	47629731	G	A	28	GENIC	homozygous	48954847
15	47630903	47630911	ATAGATAG	--------	11	GENIC	homozygous	49464343
15	47632975	47632976	C	T	26	GENIC	possibly homozygous	48301869
15	47633027	47633028	G	A	28	GENIC	possibly homozygous	48301870
15	47633264	47633289	CATCAACAACAAAAAGCAATGATGA	-------------------------	30	GENIC	possibly homozygous	48954849
15	47634567	47634568	T	A	39	GENIC	possibly homozygous	48954851
15	47635474	47635475	A	G	13	GENIC	possibly homozygous	48301875
15	47637532	47637533	C	CT	15	GENIC	homozygous	48301877
15	47640101	47640102	A	AAC	18	GENIC	heterozygous	48301884
15	47640101	47640102	A	AACAC	18	GENIC	heterozygous	49362113
15	47641412	47641416	CACA	----	2	GENIC	homozygous	48301886
15	47649518	47649519	A	-	1	GENIC	homozygous	48505919
15	47650720	47650721	T	TTGTGTG	3	GENIC	homozygous	49051381
15	47651281	47651282	A	T	24	GENIC	homozygous	48301900
15	47652848	47652849	A	AGAAGGAAGGAAG	9	GENIC	heterozygous	49051383
15	47652848	47652849	A	AGAAG	9	GENIC	heterozygous	49333821
15	47653448	47653449	T	-	21	GENIC	homozygous	48301905
15	47653697	47653698	T	G	22	GENIC	possibly homozygous	48301906
15	47655224	47655225	A	-	4	GENIC	heterozygous	49149065
15	47657973	47657974	A	AACAC	4	GENIC	heterozygous	49085665
15	47657973	47657974	A	AACACAC	4	GENIC	heterozygous	49051385
15	47660463	47660464	G	A	13	GENIC	possibly homozygous	48954856
15	47663162	47663165	TTT	---	14	GENIC	homozygous	48301915
15	47663667	47663668	C	CAAAAAAAAAAAA	1	GENIC	homozygous	48954858
15	47663924	47663926	CA	--	20	GENIC	homozygous	48301916
15	47665925	47665926	C	CA	15	GENIC	heterozygous	48301921
15	47666556	47666557	T	-	20	GENIC	possibly homozygous	48822735
15	47667410	47667411	G	GCTAAATCCCC	6	GENIC	homozygous	48954861
15	47667464	47667465	C	T	17	GENIC	homozygous	49362114
15	47668597	47668599	CA	--	18	GENIC	heterozygous	49326686
15	47669602	47669603	A	C	26	GENIC	homozygous	48301931
15	47671352	47671354	CA	--	23	GENIC	homozygous	48954863
15	47674884	47674885	A	-	11	GENIC	heterozygous	49149068
15	47671845	47671846	C	T	21	GENIC	possibly homozygous	48954864
15	47674831	47674832	G	GGGA	4	GENIC	homozygous	49085669
15	47674834	47674835	T	TAGCTCAGTGGTAGAGCGC	4	GENIC	homozygous	49085671
15	47674837	47674839	TC	--	4	GENIC	homozygous	49085673
15	47674845	47674846	A	AGCAAGCAC	3	GENIC	homozygous	49051399
15	47675800	47675801	A	AACACACAC	5	GENIC	homozygous	49085675
15	47677035	47677036	T	TA	21	GENIC	possibly homozygous	48301945
15	47682272	47682273	T	TCACACACACAGACACACACAGAGACACACACAGAGACATACATGCACACACACACACGCATATATACGCACATG	38	GENIC	homozygous	48954866
15	47682337	47682338	G	GAC	5	GENIC	heterozygous	49362115
15	47682346	47682348	AC	--	5	GENIC	heterozygous	49220859
15	47682657	47682658	A	AACACAC	5	GENIC	homozygous	49464344
15	47686200	47686201	G	A	25	GENIC	homozygous	48301963
15	47686319	47686320	A	G	31	GENIC	possibly homozygous	48822749
15	47691213	47691217	TTTG	----	17	INTERGENIC	homozygous	48301971
15	47692677	47692683	ACACAC	------	5	INTERGENIC	homozygous	49362116
15	47692778	47692779	C	T	20	INTERGENIC	homozygous	48954868
15	47694135	47694157	AGAGAGAGAGAGAGAGAGAGAG	----------------------	5	INTERGENIC	heterozygous	49464345
15	47694615	47694621	GTGTGT	------	3	INTERGENIC	heterozygous	49254524
15	47696880	47696881	C	CTGGT	20	INTERGENIC	homozygous	49362117
15	47697796	47697797	G	-	17	INTERGENIC	possibly homozygous	49362118
15	47701142	47701143	A	AACACACACACACAGACACAGAC	1	INTERGENIC	homozygous	49051417
15	47703459	47703460	T	TTGTG	2	INTERGENIC	homozygous	49051419
15	47706035	47706036	A	ATGTG	1	INTERGENIC	homozygous	48505923
15	47707463	47707464	A	AGTGTGTGTGT	13	INTERGENIC	heterozygous	49191448
15	47707463	47707464	A	AGT	13	INTERGENIC	heterozygous	49333822
15	47707464	47707466	GT	--	13	INTERGENIC	heterozygous	48301998
15	47708542	47708543	T	TACACACACACACAC	3	INTERGENIC	heterozygous	49051421
15	47708542	47708543	T	TACACACAC	3	INTERGENIC	heterozygous	49362119
15	47710181	47710182	A	T	32	INTERGENIC	homozygous	48954870
15	47713002	47713003	T	C	20	INTERGENIC	homozygous	48302003
15	47714719	47714720	T	G	24	INTERGENIC	homozygous	48954872
15	47714887	47714888	C	T	25	INTERGENIC	homozygous	48302006
15	47714891	47714892	C	CAA	28	INTERGENIC	homozygous	48302007
15	47714959	47714960	C	T	27	INTERGENIC	homozygous	49362120
15	47716234	47716238	GGGA	----	11	INTERGENIC	homozygous	49362121
15	47716241	47716242	A	T	11	INTERGENIC	homozygous	48954874
15	47716263	47716264	G	A	10	INTERGENIC	homozygous	48954876
15	47717151	47717152	A	G	29	INTERGENIC	possibly homozygous	48302014
15	47717395	47717396	G	A	24	INTERGENIC	possibly homozygous	48954878
15	47717424	47717425	A	G	17	INTERGENIC	possibly homozygous	48302015
15	47722917	47722918	G	GGTCCCTGTGTTCGGGCGCCACTT	13	INTERGENIC	possibly homozygous	49362123
15	47718204	47718205	T	C	15	INTERGENIC	possibly homozygous	48302017
15	47719515	47719516	T	C	36	INTERGENIC	possibly homozygous	48302018
15	47722813	47722814	A	ACCGGTCCTTACCTCCCTCT	14	INTERGENIC	possibly homozygous	48302022
15	47722857	47722871	GTCCTTGATTCCCT	--------------	22	INTERGENIC	possibly homozygous	49362122
15	47720716	47720717	T	-	11	INTERGENIC	heterozygous	49472517
15	47723446	47723447	A	G	27	INTERGENIC	possibly homozygous	48601468
15	47723484	47723487	AAA	---	15	INTERGENIC	possibly homozygous	48822772
15	47723497	47723504	AAAAACA	-------	9	INTERGENIC	possibly homozygous	49362124
15	47723956	47723957	C	CT	21	INTERGENIC	possibly homozygous	48822774
15	47724347	47724348	T	C	27	INTERGENIC	possibly homozygous	49362125
15	47724407	47724408	A	G	20	INTERGENIC	homozygous	48302034
15	47725211	47725212	A	G	25	INTERGENIC	possibly homozygous	48302036
15	47725328	47725329	C	T	24	INTERGENIC	possibly homozygous	49238525
15	47725371	47725372	T	TACACACAC	5	INTERGENIC	homozygous	49051431
15	47726552	47726553	G	T	21	INTERGENIC	possibly homozygous	49362126
15	47727175	47727176	G	A	29	INTERGENIC	possibly homozygous	49362127
15	47727258	47727259	G	A	26	INTERGENIC	homozygous	49362128
15	47727454	47727455	G	GATAAATAAATAA	3	INTERGENIC	heterozygous	49362129
15	47727546	47727550	GTGT	----	4	INTERGENIC	heterozygous	48302052
15	47728380	47728382	AC	--	26	INTERGENIC	possibly homozygous	49362130
15	47728593	47728594	T	TAC	8	INTERGENIC	heterozygous	48302067
15	47729125	47729126	C	CTG	6	INTERGENIC	homozygous	49464347
15	47729139	47729149	CACACACACA	----------	6	INTERGENIC	homozygous	49362131
15	47729459	47729460	T	TG	9	INTERGENIC	possibly homozygous	48302075
15	47731780	47731781	C	T	21	GENIC	possibly homozygous	48302080
15	47732608	47732609	A	G	23	GENIC	possibly homozygous	48302084
15	47732855	47732856	C	-	10	GENIC	heterozygous	49362132
15	47732859	47732860	C	-	9	GENIC	heterozygous	49362133
15	47732861	47732862	C	CA	10	GENIC	heterozygous	49362134
15	47733426	47733427	A	G	41	GENIC	homozygous	48302087
15	47733727	47733728	A	G	16	GENIC	homozygous	48302088
15	47733782	47733783	C	T	29	GENIC	possibly homozygous	49362135
15	47733788	47733789	A	C	27	GENIC	possibly homozygous	49362136
15	47733971	47733972	G	A	18	GENIC	possibly homozygous	48302089
15	47737311	47737312	G	A	27	INTERGENIC	possibly homozygous	49362137
15	47737313	47737314	C	T	26	INTERGENIC	possibly homozygous	49362138
15	47737362	47737368	GTGTGT	------	2	INTERGENIC	homozygous	49187776
15	47738823	47738824	G	GGGAAGGAAGGAA	14	INTERGENIC	homozygous	49220861
15	47738877	47738878	C	CA	13	INTERGENIC	heterozygous	48302094
15	47739720	47739721	T	-	16	INTERGENIC	possibly homozygous	48505941
15	47740065	47740066	A	G	25	INTERGENIC	homozygous	49362139
15	47740227	47740231	ACAC	----	4	INTERGENIC	heterozygous	48505943
15	47742616	47742617	C	G	17	INTERGENIC	homozygous	48302096
15	47742627	47742628	T	A	21	INTERGENIC	homozygous	48302097
15	47743930	47743931	T	G	24	INTERGENIC	homozygous	48302099
15	47744029	47744033	ACAC	----	36	INTERGENIC	heterozygous	49464348
15	47744133	47744135	AT	--	28	INTERGENIC	heterozygous	49362140
15	47749782	47749783	T	TG	2	INTERGENIC	homozygous	49238527
15	47755379	47755380	T	TACAC	9	INTERGENIC	heterozygous	49051470
15	47755380	47755382	AC	--	9	INTERGENIC	possibly homozygous	48601474
15	47755744	47755745	C	-	23	INTERGENIC	homozygous	48302112
15	47755770	47755780	TCTGTGTGTG	----------	10	INTERGENIC	homozygous	49362141
15	47755806	47755818	AGAAAGAGAGAG	------------	2	INTERGENIC	heterozygous	49464349
15	47757082	47757083	T	C	25	INTERGENIC	possibly homozygous	48302113
15	47758709	47758710	A	ATATG	14	INTERGENIC	possibly homozygous	49362142
15	47759064	47759065	G	A	24	INTERGENIC	possibly homozygous	49362143
15	47759071	47759072	T	G	25	INTERGENIC	possibly homozygous	49362144
15	47760439	47760440	A	ATG	28	INTERGENIC	possibly homozygous	49362145
15	47760942	47760943	G	GCACA	11	INTERGENIC	homozygous	49329558
15	47765086	47765090	TATG	----	12	INTERGENIC	possibly homozygous	49051474
15	47765376	47765377	A	AACACAC	12	INTERGENIC	heterozygous	49362146
15	47766191	47766201	CTCTCTCTCT	----------	7	INTERGENIC	possibly homozygous	49051476
15	47766526	47766527	A	G	26	INTERGENIC	possibly homozygous	48302127
15	47766614	47766615	G	A	26	INTERGENIC	homozygous	49362147
15	47768328	47768450	AAGATGAAAGAAAGCGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGATCCCCAGCTCCGAAAAAAAGAACCAAAAAAAAAAAAAAAAAAAA	--------------------------------------------------------------------------------------------------------------------------	25	INTERGENIC	possibly homozygous	48954926
15	47768859	47768860	T	C	14	INTERGENIC	homozygous	48302128
15	47768991	47768992	C	A	37	INTERGENIC	possibly homozygous	48302129
15	47768995	47768996	A	G	34	INTERGENIC	possibly homozygous	48302130
15	47768996	47768997	T	C	33	INTERGENIC	possibly homozygous	48302131
15	47769008	47769009	G	C	32	INTERGENIC	possibly homozygous	48302132
15	47769286	47769292	ACACAC	------	3	INTERGENIC	homozygous	49362148
15	47773241	47773242	C	CCT	25	INTERGENIC	homozygous	49362149
15	47773243	47773245	AT	--	30	INTERGENIC	homozygous	49362150
15	47773949	47773950	A	G	20	INTERGENIC	possibly homozygous	48302135
15	47775315	47775316	G	GA	27	INTERGENIC	homozygous	48302138
15	47779143	47779144	T	-	18	INTERGENIC	homozygous	48302140
15	47780695	47780696	C	T	24	INTERGENIC	possibly homozygous	48302141
15	47780783	47780784	C	CCA	6	INTERGENIC	heterozygous	49254541
15	47780963	47780964	G	T	25	INTERGENIC	homozygous	48302144
15	47781117	47781118	T	C	32	INTERGENIC	homozygous	48302145
15	47781717	47781718	C	T	23	INTERGENIC	possibly homozygous	48302146
15	47781725	47781727	CA	--	12	INTERGENIC	heterozygous	48302148
15	47781762	47781763	G	GAGAGAGAGAGAGAGAGAGAGAGAGA	8	INTERGENIC	heterozygous	48954930
15	47782150	47782151	G	C	17	INTERGENIC	homozygous	48302149
15	47782295	47782296	T	A	21	INTERGENIC	homozygous	49362151
15	47782617	47782618	A	G	18	INTERGENIC	possibly homozygous	48302150
15	47782915	47782916	T	C	29	INTERGENIC	possibly homozygous	48302151
15	47782963	47782964	T	-	24	INTERGENIC	possibly homozygous	48302152
15	47783375	47783376	T	C	30	INTERGENIC	homozygous	48302153
15	47783450	47783451	G	GCACACA	9	INTERGENIC	heterozygous	48302154
15	47783450	47783451	G	GCACA	9	INTERGENIC	heterozygous	48302155
15	47783662	47783663	A	G	22	INTERGENIC	homozygous	48302157
15	47783733	47783734	C	G	23	INTERGENIC	possibly homozygous	48302158
15	47784403	47784404	C	CAA	2	INTERGENIC	heterozygous	48302159
15	47784522	47784530	GTGTGTGT	--------	7	INTERGENIC	heterozygous	49051480
15	47784524	47784530	GTGTGT	------	7	INTERGENIC	heterozygous	49051482
15	47784703	47784704	T	C	25	INTERGENIC	possibly homozygous	48302161
15	47785353	47785354	G	T	23	INTERGENIC	possibly homozygous	48302163
15	47790252	47790253	T	C	21	INTERGENIC	possibly homozygous	48302167
15	47785965	47785966	A	G	30	INTERGENIC	homozygous	48302164
15	47787924	47787941	ATAGCCTATAGAAAAAG	-----------------	17	INTERGENIC	possibly homozygous	49362152
15	47788043	47788044	A	G	19	INTERGENIC	heterozygous	48302166
15	47790358	47790359	A	C	24	INTERGENIC	possibly homozygous	48302168
15	47790679	47790680	T	C	27	INTERGENIC	possibly homozygous	48302169
15	47791021	47791023	AG	--	5	INTERGENIC	homozygous	49051488
15	47792127	47792128	A	-	26	INTERGENIC	heterozygous	48302171
15	47792488	47792489	G	GA	6	INTERGENIC	heterozygous	48302172
15	47792773	47792775	TG	--	22	INTERGENIC	homozygous	49362153
15	47792888	47792889	G	T	29	INTERGENIC	possibly homozygous	49362154
15	47793122	47793123	C	T	37	INTERGENIC	possibly homozygous	49362155
15	47793406	47793407	A	G	31	INTERGENIC	possibly homozygous	49362156
15	47793425	47793433	TTTTGTTT	--------	24	INTERGENIC	possibly homozygous	48701110
15	47793993	47793994	A	G	27	INTERGENIC	possibly homozygous	48302175
15	47793850	47793851	A	G	26	INTERGENIC	possibly homozygous	49362157
15	47793913	47793914	A	C	18	INTERGENIC	homozygous	49362158
15	47793956	47793957	T	G	23	INTERGENIC	possibly homozygous	48302174
15	47794155	47794156	T	C	24	INTERGENIC	possibly homozygous	48302176
15	47794199	47794200	A	C	25	INTERGENIC	possibly homozygous	48302177
15	47795501	47795502	G	A	36	INTERGENIC	possibly homozygous	49362159
15	47795918	47795928	CACACACACA	----------	7	INTERGENIC	possibly homozygous	49362160
15	47796032	47796033	T	-	24	INTERGENIC	possibly homozygous	49362161
15	47799079	47799087	ACACACAC	--------	4	INTERGENIC	heterozygous	48954939
15	47799081	47799087	ACACAC	------	4	INTERGENIC	heterozygous	49085687
15	47799867	47799868	A	G	36	INTERGENIC	possibly homozygous	49362162
15	47800171	47800172	C	T	21	INTERGENIC	homozygous	49362163
15	47800330	47800331	G	T	28	INTERGENIC	homozygous	49362164
15	47800539	47800540	G	A	15	INTERGENIC	homozygous	49362165
15	47800554	47800556	AA	--	14	INTERGENIC	homozygous	48954941
15	47795633	47795634	A	-	19	INTERGENIC	possibly homozygous	49282712