chr start stop reference nuc variant nuc depth genic status zygosity variant ID 15 55253217 55253218 T C 19 GENIC homozygous 48827804 15 55253336 55253337 A G 9 GENIC homozygous 48314013 15 55255074 55255075 T A 18 GENIC homozygous 48314014 15 55255511 55255512 T TA 11 GENIC homozygous 48314015 15 55258658 55258659 C T 20 GENIC homozygous 48827806 15 55258831 55258832 C A 6 GENIC homozygous 48314018 15 55260255 55260256 G GGGAT 8 GENIC homozygous 48827808 15 55261332 55261333 C G 11 GENIC homozygous 48827810 15 55261366 55261367 T C 7 GENIC homozygous 48314020 15 55261408 55261412 AAAA ---- 7 GENIC homozygous 49054476 15 55261411 55261412 A ACTGT 7 GENIC homozygous 49054478 15 55261414 55261415 A T 8 GENIC homozygous 48602483 15 55261433 55261434 T C 8 GENIC homozygous 48314021 15 55261448 55261449 A T 9 GENIC homozygous 48314022 15 55261522 55261526 CACG ---- 5 GENIC homozygous 49437556 15 55261705 55261706 T TATGTC 10 GENIC homozygous 48314024 15 55261707 55261708 T TGCTATGGAGGAACCTCA 10 GENIC homozygous 48314026 15 55262737 55262738 C G 18 GENIC possibly homozygous 48827812 15 55263551 55263552 C - 12 GENIC heterozygous 49329578 15 55264134 55264135 A G 11 GENIC homozygous 48827814 15 55264167 55264168 G A 17 GENIC homozygous 48827816 15 55264243 55264244 C T 31 GENIC homozygous 48827818 15 55265304 55265305 A G 23 GENIC homozygous 48827820 15 55267452 55267453 T A 27 GENIC homozygous 48314030 15 55268113 55268114 A AGAATGAAAGCTGCAAAGACCAGGGGTTCAGGAAAGTATTCTCTGCCCGGGTGAAACTGGCTGGGAGTGGGAAGGAGAGGTAGGAAGGGATGTGGAGAGTCAGGT 23 GENIC homozygous 49054480 15 55268160 55268161 C T 20 GENIC homozygous 48827822 15 55268176 55268177 C G 22 GENIC homozygous 48314033 15 55268178 55268179 C - 21 GENIC homozygous 48314034 15 55271453 55271454 G A 13 GENIC homozygous 48314036 15 55271749 55271750 C G 41 GENIC homozygous 48314037 15 55275525 55275526 A G 31 GENIC homozygous 48827824 15 55277038 55277050 CTTCCTTCCTTC ------------ 11 GENIC homozygous 49054490 15 55277372 55277374 AT -- 2 GENIC homozygous 49407244 15 55277375 55277376 A - 2 GENIC homozygous 49407245 15 55279541 55279542 C T 14 GENIC homozygous 48827828 15 55280184 55280185 A G 12 GENIC homozygous 48314056 15 55281409 55281410 T TCCC 11 GENIC homozygous 48314059 15 55283046 55283047 C CGG 7 GENIC homozygous 48314063 15 55283091 55283092 G A 18 GENIC homozygous 48827830 15 55283978 55283979 G A 19 GENIC homozygous 48827832 15 55286424 55286425 G C 22 GENIC homozygous 48314067 15 55288108 55288109 T TATAATAATAATAATA 11 GENIC heterozygous 49121880 15 55289147 55289148 G GA 19 GENIC homozygous 48827834 15 55289397 55289409 ACACACACACAC ------------ 5 GENIC homozygous 49054492 15 55289526 55289527 G A 29 GENIC homozygous 48314068 15 55292203 55292204 A AT 8 GENIC heterozygous 48507259 15 55293367 55293368 C G 20 GENIC homozygous 48314069 15 55293814 55293815 T C 31 GENIC homozygous 48314070 15 55294481 55294482 A G 8 GENIC homozygous 48314071 15 55296109 55296110 T - 18 GENIC homozygous 48827836 15 55296397 55296398 G A 21 GENIC homozygous 48314073 15 55298125 55298157 ATATATATATATATATATATATATATATATAT -------------------------------- 4 GENIC heterozygous 49255438 15 55264428 55264438 TGTGTGTGTG ---------- 5 GENIC homozygous 49255432 15 55267453 55267454 T A 27 GENIC homozygous 49255433 15 55271844 55271845 C CGTGCGTGCGTGCGT 6 GENIC heterozygous 49255434 15 55276265 55276266 T TTTCCTTCCTTCCTTCCTTCC 14 GENIC homozygous 49255435 15 55284819 55284820 T TG 21 GENIC homozygous 49255437 15 55288108 55288109 T TATAATAATAATA 11 GENIC heterozygous 49086219 15 55273980 55273981 G GCA 10 GENIC heterozygous 49220972 15 55298222 55298224 TA -- 15 GENIC heterozygous 49149393 15 55298645 55298646 C A 22 GENIC homozygous 48827838 15 55299880 55299881 G GT 33 GENIC heterozygous 48314076 15 55299880 55299881 G GTT 33 GENIC possibly homozygous 48507261 15 55300424 55300425 G - 24 GENIC homozygous 48314079 15 55300664 55300665 C CGGATTGTGTATAT 22 GENIC homozygous 48827840 15 55300666 55300667 T A 21 GENIC homozygous 49255439 15 55300798 55300799 G A 30 GENIC homozygous 48314080 15 55300827 55300829 GT -- 25 GENIC possibly homozygous 48672033 15 55300847 55300848 T G 32 GENIC possibly homozygous 48827842 15 55302517 55302518 A C 8 GENIC heterozygous 48314086 15 55303049 55303050 A G 30 GENIC homozygous 48314089 15 55303113 55303114 A G 22 GENIC homozygous 48314090 15 55304135 55304136 C T 17 GENIC homozygous 48827844 15 55304883 55304884 C - 8 GENIC homozygous 48602501 15 55304915 55304916 T G 13 GENIC possibly homozygous 48314095 15 55312540 55312550 TGTGTGTGAG ---------- 7 GENIC heterozygous 49255440 15 55312586 55312587 A AGTGTGTGTGT 9 GENIC heterozygous 49054498 15 55312587 55312591 GTGT ---- 9 GENIC heterozygous 48766182 15 55312589 55312591 GT -- 9 GENIC heterozygous 49255441 15 55313461 55313462 C T 25 GENIC homozygous 48827846 15 55322525 55322526 C A 19 GENIC homozygous 48827848 15 55327634 55327635 G T 18 GENIC homozygous 48827850 15 55327636 55327645 TGCACTGCT --------- 18 GENIC homozygous 48827852 15 55331570 55331571 G GGT 5 GENIC heterozygous 48314163 15 55335022 55335038 TCTCTCTCTCTCTCTC ---------------- 8 GENIC possibly homozygous 49086221 15 55335461 55335469 GTGTGTGT -------- 7 GENIC heterozygous 48314185 15 55335465 55335469 GTGT ---- 7 GENIC heterozygous 48602503 15 55338833 55338834 C CTT 17 GENIC homozygous 48602505 15 55341386 55341387 G A 24 GENIC homozygous 48827854 15 55341916 55341917 C CTTG 13 GENIC homozygous 48314216 15 55342462 55342463 A - 9 GENIC homozygous 48827856 15 55343027 55343028 G A 17 GENIC possibly homozygous 48827858 15 55344556 55344557 G GCC 9 GENIC homozygous 48827860 15 55345287 55345288 C T 17 GENIC homozygous 48827862 15 55345317 55345318 G A 16 GENIC homozygous 48827864 15 55345388 55345389 T C 16 GENIC homozygous 48827866 15 55345487 55345489 AA -- 14 GENIC homozygous 48314225 15 55345634 55345635 C T 28 GENIC homozygous 48827868 15 55346162 55346163 G A 24 GENIC possibly homozygous 48827870 15 55347042 55347046 CAAA ---- 17 GENIC homozygous 48827872 15 55347206 55347207 G A 17 GENIC possibly homozygous 48827874 15 55348540 55348552 ACACACACACAC ------------ 6 GENIC homozygous 49255443 15 55350689 55350690 A G 31 GENIC homozygous 48314229 15 55352350 55352351 A G 15 GENIC homozygous 48314232 15 55352555 55352559 ACAC ---- 6 GENIC heterozygous 49255444 15 55353668 55353670 AA -- 23 GENIC homozygous 48827876 15 55354874 55354875 G A 23 GENIC homozygous 48827878 15 55356239 55356241 AC -- 16 GENIC homozygous 48827880 15 55356313 55356314 C - 23 GENIC homozygous 48827882 15 55356547 55356548 T - 1 GENIC homozygous 49054532 15 55356591 55356592 T TGC 7 GENIC possibly homozygous 48827884 15 55356608 55356609 C T 8 GENIC possibly homozygous 48827886 15 55356616 55356617 C T 10 GENIC possibly homozygous 48827888 15 55356617 55356618 A G 10 GENIC possibly homozygous 48827890 15 55356854 55356855 A C 22 GENIC homozygous 48827892 15 55356983 55356984 C T 15 GENIC homozygous 48827894 15 55357151 55357153 AT -- 20 GENIC homozygous 48827896 15 55358076 55358077 G A 24 GENIC homozygous 48827898 15 55358947 55358948 A - 6 GENIC homozygous 48827900 15 55359221 55359222 G A 16 GENIC homozygous 48314250 15 55359274 55359275 G A 14 GENIC homozygous 48314251 15 55359627 55359630 GAG --- 12 GENIC homozygous 48959052 15 55359622 55359623 T A 12 GENIC homozygous 48827902 15 55359624 55359625 T A 12 GENIC homozygous 48827904 15 55300665 55300666 C CA 22 GENIC homozygous 48959045 15 55300826 55300827 G GGTGTGTGTGTGTGTGTGC 25 GENIC heterozygous 48959047 15 55345030 55345031 G GTGTGTGTC 12 GENIC heterozygous 48959050 15 55359631 55359632 G A 11 GENIC homozygous 49255445 15 55359632 55359633 A AC 10 GENIC homozygous 48827906 15 55359819 55359820 G A 20 GENIC homozygous 48827908 15 55362021 55362022 G A 10 GENIC homozygous 48827910 15 55362046 55362047 G A 13 GENIC homozygous 48827912 15 55362707 55362708 A AAC 3 GENIC heterozygous 49054534 15 55363780 55363781 G A 20 GENIC homozygous 48827914 15 55366098 55366099 A C 20 GENIC homozygous 48314258 15 55367143 55367144 T C 13 GENIC homozygous 48314260 15 55368416 55368417 A AGT 13 GENIC homozygous 48959054 15 55371555 55371559 TCTG ---- 17 GENIC possibly homozygous 48827916 15 55374624 55374625 C - 26 GENIC possibly homozygous 48507269 15 55374903 55374904 C A 12 GENIC homozygous 48827918 15 55375440 55375441 T TTGTGTGTG 12 GENIC homozygous 49220973 15 55376336 55376337 T TGA 7 GENIC heterozygous 48314268 15 55376336 55376337 T TGTGAGA 7 GENIC possibly homozygous 49255446 15 55377145 55377146 G A 29 GENIC homozygous 48827922 15 55377478 55377479 C CAGAAAACATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 3 GENIC homozygous 49054540 15 55380798 55380802 AACT ---- 10 GENIC homozygous 48827924 15 55381493 55381494 C T 20 GENIC homozygous 48827926 15 55382529 55382530 A AG 10 GENIC homozygous 48507271 15 55383516 55383517 T - 24 GENIC homozygous 48314275 15 55383521 55383522 A G 28 GENIC homozygous 48314276 15 55384293 55384294 C CAG 5 GENIC heterozygous 49054544 15 55386414 55386415 T C 15 GENIC homozygous 48314278 15 55387911 55387912 G GGA 6 GENIC homozygous 48827928 15 55388099 55388100 A AACACACAC 8 GENIC homozygous 49191530 15 55390684 55390685 T G 3 GENIC homozygous 48314281 15 55392260 55392261 G A 19 GENIC homozygous 48827930 15 55392509 55392510 T TACACACAC 3 GENIC homozygous 49054549 15 55394240 55394246 AGAGAG ------ 6 GENIC heterozygous 49149401 15 55394668 55394669 C T 21 GENIC homozygous 48827936 15 55395356 55395359 TGA --- 3 GENIC homozygous 49255448 15 55395360 55395444 CTGCACAGCTCCAGAGGACTCAATATTCCTGGAGAAGTCACCCCAAAACTGCACTATGGTCTCAGGCACCAGCCTGCCACCTCT ------------------------------------------------------------------------------------ 14 GENIC possibly homozygous 48959056 15 55395905 55395906 G GA 17 GENIC homozygous 48314287 15 55395600 55395601 G C 10 GENIC homozygous 48314284 15 55395604 55395605 G C 10 GENIC homozygous 48314285 15 55395729 55395732 TTG --- 15 GENIC homozygous 48314286 15 55399432 55399433 T C 12 GENIC homozygous 48314289 15 55400634 55400635 A G 23 GENIC homozygous 48314291 15 55401666 55401667 C T 23 GENIC homozygous 48314292 15 55401817 55401818 A G 25 GENIC homozygous 48314293 15 55403661 55403662 C CACAGACACAGAG 10 GENIC homozygous 48959058 15 55404040 55404055 CTAAGGTTGAGCTGG --------------- 17 GENIC homozygous 48827942 15 55404776 55404777 A G 17 GENIC homozygous 48314296 15 55404879 55404880 G T 18 GENIC homozygous 48827944 15 55405841 55405842 T C 34 GENIC homozygous 48314297 15 55407710 55407711 A G 13 GENIC homozygous 48314300 15 55407963 55407964 T C 20 GENIC possibly homozygous 48314301 15 55408845 55408846 C A 22 GENIC homozygous 48827946 15 55409092 55409093 A G 21 GENIC homozygous 48314302 15 55409299 55409300 C - 8 GENIC homozygous 48314303 15 55410539 55410540 G A 29 GENIC homozygous 48827948 15 55413416 55413417 T G 26 GENIC homozygous 48827950 15 55413743 55413744 A - 19 GENIC homozygous 48672037 15 55413756 55413757 A - 22 GENIC homozygous 48827952 15 55414224 55414225 T TTGACCAGGGTCACCTCCTAGA 17 GENIC homozygous 48314306 15 55415016 55415017 C - 15 GENIC homozygous 48507279 15 55416221 55416222 G T 19 GENIC homozygous 48827954 15 55417680 55417681 G A 16 GENIC homozygous 48827956 15 55419203 55419206 AAA --- 15 GENIC heterozygous 48314308 15 55419204 55419206 AA -- 15 GENIC heterozygous 48314309 15 55419274 55419275 G GAGGAAGGAAGGAAGGA 18 GENIC homozygous 49054563 15 55419322 55419323 G GAGGA 27 GENIC homozygous 49054565 15 55420504 55420506 TA -- 9 GENIC homozygous 48314314 15 55420536 55420538 TA -- 8 GENIC homozygous 48314315 15 55421415 55421417 TT -- 10 GENIC heterozygous 48314316 15 55421416 55421417 T - 10 GENIC heterozygous 48827960 15 55421586 55421587 T C 22 GENIC homozygous 48314317 15 55422448 55422449 G A 31 GENIC homozygous 48827962 15 55422538 55422539 C T 28 GENIC homozygous 48827964 15 55423522 55423540 TATAGATATAGATATAGA ------------------ 7 GENIC homozygous 49255449 15 55424107 55424108 G GGAGA 18 GENIC homozygous 49255450 15 55426235 55426236 G T 16 GENIC homozygous 48314322 15 55426742 55426743 T TACAC 15 GENIC heterozygous 48314325 15 55428510 55428516 TCTCTC ------ 6 GENIC homozygous 49329580 15 55429256 55429257 G A 25 GENIC homozygous 48314327 15 55430436 55430437 A AACACAC 17 GENIC heterozygous 49437557 15 55430460 55430461 C CACACACAGACATACATACACAGACACACAGACACACACAGACACACACACATACACACAGACACAT 31 GENIC heterozygous 49054581 15 55430496 55430497 G GAT 33 GENIC heterozygous 48314329 15 55430517 55430519 AC -- 35 GENIC heterozygous 48314332 15 55430536 55430537 C CAG 35 GENIC heterozygous 49054583 15 55433011 55433012 G A 13 GENIC homozygous 48827970 15 55422702 55422703 G A 26 GENIC homozygous 48827966 15 55423686 55423687 C T 10 GENIC homozygous 48827968 15 55433356 55433357 C CCA 7 GENIC possibly homozygous 48314334 15 55433747 55433757 CACCTTGACC ---------- 18 GENIC homozygous 48827972 15 55434039 55434043 CACA ---- 7 GENIC homozygous 48314336 15 55434687 55434688 A AC 14 GENIC homozygous 48314338 15 55436021 55436022 G GAGAA 6 GENIC heterozygous 48507287 15 55436106 55436110 AAGA ---- 11 GENIC homozygous 48314340 15 55436398 55436399 G GACACACACAC 8 GENIC homozygous 49191532 15 55437484 55437485 A - 14 GENIC homozygous 48314345 15 55437552 55437553 T C 26 GENIC homozygous 48314347 15 55438032 55438033 T C 20 GENIC homozygous 48314348 15 55439124 55439125 G GTCTC 4 GENIC heterozygous 49054593 15 55439718 55439720 CC -- 21 GENIC homozygous 48314350 15 55441737 55441738 T A 14 GENIC homozygous 48314352 15 55441739 55441740 A C 14 GENIC homozygous 48314353 15 55441815 55441816 T G 18 GENIC homozygous 48314354 15 55441905 55441906 C CGG 5 GENIC homozygous 48314355 15 55442848 55442860 CCTTCCTTCCTT ------------ 13 GENIC homozygous 49255451 15 55442914 55442915 T C 19 GENIC possibly homozygous 48827974 15 55444577 55444578 G A 14 GENIC homozygous 48827976 15 55444624 55444625 T TG 11 GENIC heterozygous 49086228 15 55444625 55444626 T TTGTGTGTGTGTGTGTGTGTG 6 GENIC homozygous 49054601 15 55448426 55448427 T G 24 GENIC homozygous 48959060 15 55448429 55448438 TTTTTTTTG --------- 20 GENIC possibly homozygous 48314364 15 55448573 55448574 A C 20 GENIC homozygous 48314366 15 55448607 55448608 T TGTC 18 GENIC homozygous 48314367 15 55449199 55449200 T C 27 GENIC homozygous 48314368 15 55449763 55449764 C T 17 GENIC homozygous 48314369 15 55450184 55450185 T C 20 GENIC homozygous 48314370 15 55450347 55450357 GGACAGGATG ---------- 20 GENIC homozygous 48314371 15 55450802 55450803 T A 15 GENIC homozygous 48314372 15 55451048 55451049 C CAAAAAAA 1 GENIC homozygous 49188065 15 55451136 55451137 A G 36 GENIC homozygous 48314374 15 55451302 55451303 C G 23 GENIC homozygous 48827978 15 55451426 55451427 T A 25 GENIC homozygous 48314375 15 55451791 55451792 A G 19 GENIC homozygous 48827980 15 55451947 55451959 ACACACACACAA ------------ 1 GENIC homozygous 49255452 15 55452710 55452711 G A 22 GENIC homozygous 48314376 15 55453938 55453939 C T 15 GENIC homozygous 48314377 15 55453993 55453994 A C 12 GENIC homozygous 48314378 15 55454273 55454274 T C 26 GENIC homozygous 48314379 15 55454466 55454472 CACACA ------ 7 GENIC heterozygous 49086232 15 55455145 55455146 G GA 21 GENIC homozygous 48314380 15 55455404 55455406 GG -- 14 GENIC homozygous 48314381 15 55455431 55455432 T TCATTTGGATAACCCTAGGAAGGTCACTGGGGATGGAAAACACAG 21 GENIC homozygous 48959062 15 55455478 55455479 A G 18 GENIC homozygous 48314382 15 55456533 55456534 T C 33 GENIC homozygous 48314383 15 55457279 55457280 A G 16 GENIC homozygous 48314384 15 55457653 55457654 C T 11 GENIC homozygous 48314385 15 55459558 55459559 T TACAC 5 GENIC homozygous 49255453 15 55459795 55459797 AC -- 12 GENIC heterozygous 49149411 15 55462399 55462400 A G 25 GENIC homozygous 48314387 15 55462803 55462804 C T 26 GENIC homozygous 48314388 15 55463092 55463093 A C 28 GENIC homozygous 48314390 15 55463983 55463984 C T 32 GENIC homozygous 48314391 15 55465417 55465418 G A 19 GENIC homozygous 48314392 15 55443785 55443786 T TAC 23 GENIC possibly homozygous 49326750