chr start stop reference nuc variant nuc depth genic status zygosity variant ID 15 48198634 48198635 T C 38 GENIC homozygous 48302999 15 48198643 48198644 T C 40 GENIC homozygous 48303000 15 48199996 48199997 G - 34 GENIC homozygous 48303001 15 48199999 48200000 A C 36 GENIC homozygous 48955297 15 48200640 48200644 TCTC ---- 6 GENIC heterozygous 49051725 15 48200642 48200644 TC -- 6 GENIC heterozygous 49051727 15 48200705 48200706 C CCTCTCT 3 GENIC homozygous 48303003 15 48200774 48200775 C CTGTGTGTG 1 GENIC homozygous 49051729 15 48201234 48201235 T C 26 GENIC homozygous 48303005 15 48201363 48201364 A G 27 GENIC homozygous 48303006 15 48201440 48201441 G A 31 GENIC homozygous 48303007 15 48202095 48202096 A G 33 GENIC homozygous 48303008 15 48205992 48205993 T C 29 GENIC homozygous 48303009 15 48206149 48206150 C A 22 GENIC homozygous 48303010 15 48207813 48207814 A G 32 GENIC homozygous 48303011 15 48208067 48208068 A T 19 GENIC homozygous 48303012 15 48208068 48208069 A C 19 GENIC homozygous 48303013 15 48208731 48208755 GTGTGTGTGTGTGTGTGTGTGTGT ------------------------ 14 GENIC homozygous 49051731 15 48209179 48209180 C T 35 GENIC homozygous 48303016 15 48209249 48209250 G A 37 GENIC homozygous 48303017 15 48209444 48209445 A G 13 GENIC homozygous 48303018 15 48209656 48209658 TT -- 15 GENIC homozygous 48303019 15 48210024 48210025 C T 15 GENIC homozygous 48303020 15 48210227 48210228 A T 14 GENIC homozygous 48303021 15 48210805 48210806 C A 28 GENIC homozygous 48303022 15 48210934 48210935 A G 23 GENIC homozygous 48303023 15 48211061 48211062 C G 25 GENIC homozygous 48303024 15 48211921 48211922 G T 19 GENIC homozygous 48303025 15 48212007 48212008 C CATCT 7 GENIC heterozygous 49051733 15 48212007 48212008 C CATCTATCT 7 GENIC heterozygous 49187786 15 48212100 48212101 A G 19 GENIC homozygous 48303027 15 48212110 48212111 C - 17 GENIC homozygous 48303028 15 48212474 48212475 A G 15 GENIC homozygous 48303031 15 48212779 48212780 A AT 13 GENIC homozygous 48303032 15 48212911 48212912 A G 14 GENIC homozygous 48303033 15 48212963 48212964 C G 12 GENIC homozygous 48303034 15 48213532 48213533 T A 21 GENIC homozygous 48303035 15 48213577 48213578 T C 21 GENIC homozygous 48303036 15 48213659 48213660 C T 16 GENIC homozygous 48303037 15 48213942 48213943 T C 32 GENIC homozygous 48303038 15 48214155 48214156 T G 14 GENIC homozygous 48303039 15 48214277 48214280 CTA --- 15 GENIC homozygous 48303040 15 48214383 48214384 C CTCTGTGTGTG 7 GENIC homozygous 49051735 15 48214458 48214459 A G 11 GENIC homozygous 48303042 15 48214716 48214717 C A 10 GENIC homozygous 48303043 15 48214864 48214865 A G 16 GENIC homozygous 48303044 15 48215162 48215163 A G 16 GENIC homozygous 48303045 15 48215511 48215512 C T 22 GENIC homozygous 48303046 15 48215783 48215784 C T 9 GENIC homozygous 48303047 15 48216215 48216216 C T 15 GENIC homozygous 48303048 15 48216240 48216241 G A 21 GENIC homozygous 48303049 15 48216665 48216666 G A 1 GENIC homozygous 49051741 15 48216678 48216679 G A 1 GENIC homozygous 48303058 15 48212469 48212470 A AG 7 GENIC possibly homozygous 48505991 15 48215906 48215909 TTT --- 6 GENIC homozygous 48505993 15 48217998 48217999 C A 19 GENIC homozygous 48303071 15 48218266 48218267 A C 14 GENIC homozygous 48303072 15 48218272 48218273 C CTTTTTTTTTCT 15 GENIC homozygous 49051743 15 48219352 48219353 C G 21 GENIC homozygous 48303082 15 48218327 48218328 T C 16 GENIC homozygous 48303073 15 48218342 48218343 T C 16 GENIC homozygous 48303074 15 48218809 48218810 C - 7 GENIC homozygous 48303079 15 48219830 48219831 C T 18 GENIC homozygous 48303085 15 48220369 48220370 T C 9 GENIC homozygous 48303087 15 48220377 48220378 C T 9 GENIC homozygous 48303088 15 48220465 48220466 T C 15 GENIC homozygous 48303090 15 48221797 48221798 A G 20 GENIC homozygous 48303092 15 48221821 48221822 C G 29 GENIC homozygous 48303093 15 48222009 48222010 A G 15 GENIC homozygous 48303094 15 48222023 48222024 A T 15 GENIC homozygous 48303095 15 48222123 48222124 C A 2 GENIC homozygous 48955331 15 48222127 48222128 C A 2 GENIC homozygous 49051745 15 48222369 48222370 T C 12 GENIC homozygous 48303096 15 48222388 48222389 C CTT 10 GENIC homozygous 48303097 15 48222424 48222425 G C 13 GENIC homozygous 48303098 15 48222488 48222489 G A 14 GENIC homozygous 48303099 15 48222709 48222710 G A 7 GENIC homozygous 48303100 15 48222774 48222775 G A 15 GENIC homozygous 48303101 15 48222859 48222860 G A 18 GENIC homozygous 48303102 15 48222992 48222993 C CTGG 26 GENIC homozygous 48303103 15 48223215 48223216 C T 16 GENIC homozygous 48303104 15 48223495 48223496 G C 16 GENIC homozygous 48303105 15 48223567 48223568 C T 12 GENIC homozygous 48303106 15 48223660 48223661 T G 17 GENIC homozygous 48303107 15 48224212 48224213 A G 29 GENIC homozygous 48303108 15 48224214 48224215 A G 29 GENIC homozygous 48303109 15 48224638 48224639 T A 12 GENIC homozygous 48303110 15 48224758 48224759 A G 8 GENIC homozygous 48303111 15 48224947 48224954 TCATCGA ------- 15 GENIC homozygous 48303112 15 48225127 48225128 C A 8 GENIC homozygous 48303113 15 48225537 48225547 ATTTTAACAC ---------- 11 GENIC homozygous 48303114 15 48225581 48225582 T G 18 GENIC homozygous 48303115 15 48225653 48225654 A G 22 GENIC homozygous 48303116 15 48225873 48225874 C T 16 GENIC homozygous 48303117 15 48225889 48225890 C T 17 GENIC homozygous 48303118 15 48225965 48225966 C A 15 GENIC homozygous 48303119 15 48226242 48226243 T C 11 GENIC homozygous 48303120 15 48226370 48226371 C G 14 GENIC homozygous 48303121 15 48226486 48226487 T C 20 GENIC homozygous 48303122 15 48226677 48226678 G A 16 GENIC homozygous 48303123 15 48226720 48226721 A G 13 GENIC homozygous 48303124 15 48227086 48227087 C G 11 GENIC homozygous 48303125 15 48227521 48227523 CA -- 35 GENIC possibly homozygous 48303126 15 48227610 48227611 G C 22 GENIC homozygous 48303127 15 48227856 48227857 C T 21 GENIC homozygous 48303128 15 48227895 48227909 GAGCACAAGAGGGA -------------- 27 GENIC homozygous 48303129 15 48228078 48228079 C T 16 GENIC homozygous 48303130 15 48228189 48228190 A T 12 GENIC homozygous 48303131 15 48228478 48228479 A G 23 GENIC homozygous 48303132 15 48228541 48228542 C CACATAT 9 GENIC homozygous 48303134 15 48228960 48228961 A G 12 GENIC homozygous 48303135 15 48229821 48229822 G T 20 GENIC possibly homozygous 48303136 15 48230570 48230572 GA -- 9 GENIC homozygous 48303137 15 48230578 48230588 GTGTGTGTGA ---------- 11 GENIC possibly homozygous 48303138 15 48230632 48230633 C G 24 GENIC homozygous 48303139 15 48230716 48230717 A AT 18 GENIC homozygous 48303140 15 48231524 48231525 A AGAAC 19 GENIC possibly homozygous 49051747 15 48232210 48232211 A C 23 GENIC homozygous 48303141 15 48232691 48232692 G A 19 GENIC homozygous 48303142 15 48233969 48233970 G A 14 GENIC homozygous 48303143 15 48234325 48234326 C T 16 GENIC homozygous 48303144 15 48234487 48234488 A G 31 GENIC homozygous 48303145 15 48234998 48234999 C CACACACACACACACA 25 GENIC homozygous 48303148 15 48235232 48235233 G A 20 GENIC homozygous 48303149 15 48235237 48235238 C T 19 GENIC homozygous 48303150 15 48235648 48235649 A - 16 GENIC heterozygous 49051749 15 48235650 48235651 A - 28 GENIC possibly homozygous 48303151 15 48235652 48235655 ACT --- 13 GENIC heterozygous 48303152 15 48235788 48235789 G T 36 GENIC homozygous 48303153 15 48235881 48235882 A - 29 GENIC homozygous 48303154 15 48236083 48236084 A G 29 GENIC homozygous 48303155 15 48236902 48236903 C A 16 GENIC homozygous 48303156 15 48237823 48237824 T TACAC 14 GENIC heterozygous 48303157 15 48237823 48237824 T TAC 14 GENIC heterozygous 49085725 15 48238655 48238656 T - 13 GENIC homozygous 48303158 15 48238728 48238729 C CTT 7 GENIC homozygous 48303159 15 48239002 48239008 TGTGTA ------ 26 GENIC homozygous 48303160 15 48239022 48239024 TG -- 26 GENIC possibly homozygous 49051751 15 48239888 48239889 G C 35 GENIC homozygous 48303163 15 48240645 48240646 C T 11 GENIC homozygous 48303164 15 48241388 48241389 C T 11 GENIC homozygous 48303165 15 48241406 48241407 C CT 9 GENIC homozygous 48303166 15 48241672 48241673 T TA 9 GENIC homozygous 48303167 15 48242029 48242030 C T 24 GENIC homozygous 48303168 15 48242717 48242718 A G 35 GENIC homozygous 48303169 15 48243638 48243639 A - 18 GENIC homozygous 48303170 15 48245151 48245152 T - 16 GENIC heterozygous 48303171 15 48245395 48245396 G A 12 GENIC homozygous 48303172 15 48246007 48246008 C T 16 GENIC homozygous 48303173 15 48249368 48249369 T TTC 6 GENIC heterozygous 49051755 15 48249428 48249429 C CGT 12 GENIC homozygous 48303176 15 48249530 48249531 A T 24 GENIC possibly homozygous 48303177 15 48249532 48249533 A T 23 GENIC possibly homozygous 48303178 15 48249563 48249575 GAGAGAGAGAGG ------------ 17 GENIC heterozygous 49051759 15 48250139 48250140 T C 25 GENIC homozygous 48303180 15 48250165 48250166 G T 24 GENIC homozygous 48303181 15 48250185 48250186 C G 24 GENIC homozygous 48303182 15 48250226 48250227 T C 24 GENIC homozygous 48303183 15 48250384 48250385 A G 22 GENIC homozygous 48303184 15 48250729 48250730 G A 34 GENIC homozygous 48303185 15 48251001 48251002 G A 24 GENIC homozygous 48701141 15 48251003 48251004 T G 24 GENIC homozygous 48303186 15 48251022 48251023 G T 25 GENIC homozygous 48303187 15 48251023 48251024 G A 25 GENIC homozygous 48303188 15 48251025 48251026 G C 25 GENIC homozygous 48303189 15 48251646 48251647 G A 23 GENIC homozygous 48303191 15 48251816 48251817 G - 19 GENIC homozygous 48823674 15 48251817 48251818 A T 20 GENIC homozygous 48955368 15 48252185 48252186 A C 24 GENIC homozygous 48303192 15 48252257 48252258 A G 22 GENIC homozygous 48303193 15 48252432 48252433 C T 19 GENIC homozygous 48303194 15 48252488 48252489 C T 21 GENIC homozygous 48303195 15 48253347 48253348 G A 26 GENIC homozygous 48303196 15 48253621 48253622 T C 17 GENIC homozygous 48303197 15 48253642 48253643 T TA 17 GENIC homozygous 48303198 15 48253797 48253798 C CT 15 GENIC possibly homozygous 48303199 15 48253944 48253945 T C 24 GENIC homozygous 48303201 15 48254156 48254171 ACCACCACCACCACC --------------- 31 GENIC homozygous 48303202 15 48254344 48254366 TCTCTCTCTCTCTCTCTCTCTA ---------------------- 5 GENIC heterozygous 49051764 15 48254346 48254366 TCTCTCTCTCTCTCTCTCTA -------------------- 5 GENIC heterozygous 49051766 15 48254576 48254577 G C 23 GENIC homozygous 48303205 15 48257275 48257276 G A 29 GENIC homozygous 48303206 15 48258220 48258221 G A 18 GENIC homozygous 48303207 15 48258234 48258235 G GAGAC 10 GENIC heterozygous 49051768 15 48258629 48258630 T G 23 GENIC homozygous 48303210 15 48258630 48258631 C A 24 GENIC homozygous 48303211 15 48258659 48258660 C T 28 GENIC homozygous 48303212 15 48259263 48259291 TTCCTTCCTTCCTTCCTTCCTTCCTTCC ---------------------------- 21 GENIC homozygous 48955371 15 48259636 48259637 C T 21 GENIC homozygous 48303213 15 48259698 48259699 T TGA 16 GENIC homozygous 48303214 15 48259784 48259785 T TCC 10 GENIC homozygous 49051772 15 48259702 48259703 A G 15 GENIC homozygous 48303215 15 48259736 48259737 T TCC 11 GENIC homozygous 49051770 15 48259741 48259742 T C 14 GENIC homozygous 48303217 15 48221318 48221320 CT -- 7 GENIC heterozygous 49209199 15 48249368 48249369 T TTCTC 6 GENIC heterozygous 49209201 15 48259785 48259786 T TTCCTTCCTTC 10 GENIC homozygous 49051774 15 48259837 48259838 A C 14 GENIC homozygous 48303223 15 48259970 48259971 C T 18 GENIC homozygous 48303224 15 48260634 48260635 C - 37 GENIC homozygous 48303225 15 48261382 48261383 T C 17 GENIC homozygous 48303226 15 48261946 48261948 AG -- 14 GENIC possibly homozygous 49051775 15 48261952 48261954 AG -- 8 GENIC heterozygous 49085731 15 48263313 48263314 G A 19 GENIC homozygous 48303228 15 48266063 48266064 G A 22 GENIC homozygous 48303229 15 48266074 48266075 C T 23 GENIC homozygous 48303230 15 48266258 48266259 C T 14 GENIC homozygous 48303231 15 48267807 48267808 A G 26 GENIC homozygous 48303233 15 48269045 48269046 A AGAGAGAG 2 GENIC heterozygous 49051779 15 48269921 48269922 A ACTCT 11 GENIC heterozygous 49051781 15 48269968 48269974 CCTTCC ------ 35 GENIC heterozygous 49121528 15 48270217 48270218 A G 23 GENIC homozygous 48303235 15 48270453 48270455 CC -- 19 GENIC homozygous 48303237 15 48272247 48272248 T TA 10 GENIC possibly homozygous 48303239 15 48272645 48272646 A AACAC 13 GENIC homozygous 48303241 15 48274782 48274783 A AGTGT 12 GENIC heterozygous 49085735 15 48274782 48274783 A AGTGTGTGT 12 GENIC possibly homozygous 49051783 15 48275559 48275560 T C 32 GENIC homozygous 48303245 15 48275754 48275755 T TATAC 21 GENIC heterozygous 49149114 15 48275755 48275761 ACACAC ------ 21 GENIC possibly homozygous 49051785 15 48276500 48276501 A C 18 GENIC homozygous 48303247 15 48276528 48276529 G C 19 GENIC homozygous 48303248 15 48276531 48276532 T C 18 GENIC homozygous 48303249 15 48276633 48276634 G C 14 GENIC homozygous 48303250 15 48277039 48277040 C T 20 GENIC homozygous 48303251 15 48278477 48278480 AAA --- 16 GENIC heterozygous 49085737 15 48278478 48278480 AA -- 16 GENIC possibly homozygous 49051787 15 48278493 48278494 T C 16 GENIC homozygous 48303254 15 48278649 48278652 AGG --- 23 GENIC homozygous 48303255 15 48278846 48278847 A G 35 GENIC homozygous 48303256 15 48278982 48278983 T G 32 GENIC homozygous 48303257 15 48279009 48279010 A C 34 GENIC homozygous 48303258 15 48279294 48279295 T G 31 GENIC homozygous 48303259 15 48279305 48279306 T C 32 GENIC homozygous 48303260 15 48279321 48279322 T C 37 GENIC homozygous 48303261 15 48279761 48279762 A G 25 GENIC homozygous 48303262 15 48281496 48281497 A G 18 GENIC possibly homozygous 48303266 15 48281614 48281615 A G 17 GENIC homozygous 48303267 15 48283650 48283651 G A 30 GENIC homozygous 48303268 15 48283743 48283744 T A 18 GENIC homozygous 48303269 15 48283993 48283994 C T 29 GENIC homozygous 48303270 15 48284102 48284103 A G 23 GENIC homozygous 48303271 15 48284153 48284154 C T 19 GENIC homozygous 48303272 15 48284194 48284195 G T 21 GENIC homozygous 48303273 15 48284244 48284266 GCTCTGAGGACTCATGTCCTCC ---------------------- 35 GENIC homozygous 48303274 15 48284353 48284354 G A 18 GENIC homozygous 48303275 15 48284366 48284367 T C 17 GENIC homozygous 48303276 15 48284619 48284620 A G 31 GENIC homozygous 48303277 15 48284641 48284642 C CTCTGTGTA 35 GENIC homozygous 49051789 15 48284659 48284660 G GTGTGTGTGTGTGTGTGTA 34 GENIC homozygous 49051791 15 48285883 48285884 T C 19 GENIC homozygous 48303280 15 48286096 48286097 A G 21 GENIC homozygous 48303281 15 48286130 48286131 C T 26 GENIC homozygous 48303282 15 48286449 48286450 G GGAAGAAGA 27 GENIC homozygous 48303283 15 48286493 48286494 T A 42 GENIC homozygous 48303284 15 48286503 48286504 C A 43 GENIC homozygous 48303285 15 48286857 48286858 G C 42 GENIC homozygous 48303286 15 48286938 48286939 G T 17 GENIC homozygous 48303287 15 48286942 48286943 G - 16 GENIC homozygous 48303288 15 48287001 48287002 A - 7 GENIC homozygous 48303289 15 48289097 48289098 A ACAATCAAT 23 GENIC homozygous 48303290 15 48291885 48291886 T TCTCCCTGACTGACACGTCTGAGGCTTGGTTCTTCTCTGTCTTTTCTCTGGGTGCCTCCTCTCTGGCAGGCCTTCCTGTGC 4 GENIC homozygous 49051795 15 48292408 48292411 TTT --- 17 GENIC homozygous 48303293 15 48293104 48293105 A G 24 GENIC homozygous 48303295 15 48293165 48293166 G GTTA 24 GENIC homozygous 48303296 15 48294059 48294060 A T 25 GENIC possibly homozygous 48303297 15 48295084 48295085 G C 21 GENIC homozygous 48303298 15 48296062 48296063 T C 24 GENIC homozygous 48303299 15 48297047 48297049 GG -- 24 GENIC homozygous 48303300 15 48297287 48297288 C G 21 GENIC homozygous 48303301