chr start stop reference nuc variant nuc depth genic status zygosity variant ID 15 55253217 55253218 T C 19 GENIC heterozygous 48827804 15 55253336 55253337 A G 21 GENIC homozygous 48314013 15 55255074 55255075 T A 13 GENIC homozygous 48314014 15 55255511 55255512 T TA 4 GENIC homozygous 48314015 15 55258658 55258659 C T 14 GENIC homozygous 48827806 15 55258831 55258832 C A 7 GENIC homozygous 48314018 15 55261332 55261333 C G 4 GENIC homozygous 48827810 15 55261433 55261434 T C 4 GENIC homozygous 48314021 15 55261448 55261449 A T 5 GENIC homozygous 48314022 15 55262737 55262738 C G 16 GENIC possibly homozygous 48827812 15 55264134 55264135 A G 14 GENIC possibly homozygous 48827814 15 55264167 55264168 G A 12 GENIC homozygous 48827816 15 55264243 55264244 C T 16 GENIC homozygous 48827818 15 55265304 55265305 A G 20 GENIC homozygous 48827820 15 55268160 55268161 C T 8 GENIC homozygous 48827822 15 55268176 55268177 C G 3 GENIC heterozygous 48314033 15 55268178 55268179 C - 3 GENIC heterozygous 48314034 15 55271453 55271454 G A 19 GENIC homozygous 48314036 15 55271749 55271750 C G 14 GENIC possibly homozygous 48314037 15 55275525 55275526 A G 5 GENIC homozygous 48827824 15 55279541 55279542 C T 25 GENIC homozygous 48827828 15 55280184 55280185 A G 9 GENIC homozygous 48314056 15 55283091 55283092 G A 4 GENIC heterozygous 48827830 15 55283978 55283979 G A 9 GENIC possibly homozygous 48827832 15 55286424 55286425 G C 20 GENIC possibly homozygous 48314067 15 55289147 55289148 G GA 9 GENIC heterozygous 48827834 15 55289526 55289527 G A 11 GENIC homozygous 48314068 15 55293367 55293368 C G 25 GENIC homozygous 48314069 15 55293814 55293815 T C 9 GENIC homozygous 48314070 15 55294481 55294482 A G 19 GENIC homozygous 48314071 15 55296109 55296110 T - 5 GENIC heterozygous 48827836 15 55296397 55296398 G A 25 GENIC possibly homozygous 48314073 15 55298645 55298646 C A 18 GENIC possibly homozygous 48827838 15 55299880 55299881 G GTT 2 GENIC heterozygous 48507261 15 55300424 55300425 G - 20 GENIC homozygous 48314079 15 55300664 55300665 C CGGATTGTGTATAT 1 GENIC homozygous 48827840 15 55300798 55300799 G A 17 GENIC homozygous 48314080 15 55300665 55300666 C CA 1 GENIC homozygous 48959045 15 55300826 55300827 G GGTGTGTGTGTGTGTGTGC 1 GENIC homozygous 48959047 15 55300847 55300848 T G 5 GENIC heterozygous 48827842 15 55303049 55303050 A G 6 GENIC homozygous 48314089 15 55303113 55303114 A G 14 GENIC homozygous 48314090 15 55304135 55304136 C T 28 GENIC homozygous 48827844 15 55304883 55304884 C - 1 GENIC homozygous 48602501 15 55313461 55313462 C T 23 GENIC possibly homozygous 48827846 15 55322525 55322526 C A 17 GENIC heterozygous 48827848 15 55327634 55327635 G T 1 GENIC homozygous 48827850 15 55327636 55327645 TGCACTGCT --------- 3 GENIC homozygous 48827852 15 55341386 55341387 G A 20 GENIC homozygous 48827854 15 55343027 55343028 G A 18 GENIC possibly homozygous 48827858 15 55345030 55345031 G GTGTGTGTC 1 GENIC homozygous 48959050 15 55345287 55345288 C T 14 GENIC homozygous 48827862 15 55345317 55345318 G A 12 GENIC possibly homozygous 48827864 15 55345388 55345389 T C 9 GENIC heterozygous 48827866 15 55345634 55345635 C T 6 GENIC homozygous 48827868 15 55346162 55346163 G A 22 GENIC homozygous 48827870 15 55347042 55347046 CAAA ---- 9 GENIC homozygous 48827872 15 55347206 55347207 G A 29 GENIC homozygous 48827874 15 55350689 55350690 A G 17 GENIC homozygous 48314229 15 55352350 55352351 A G 9 GENIC homozygous 48314232 15 55353668 55353670 AA -- 12 GENIC homozygous 48827876 15 55354874 55354875 G A 26 GENIC homozygous 48827878 15 55356239 55356241 AC -- 5 GENIC homozygous 48827880 15 55356313 55356314 C - 15 GENIC homozygous 48827882 15 55356616 55356617 C T 2 GENIC heterozygous 48827888 15 55356617 55356618 A G 3 GENIC heterozygous 48827890 15 55356854 55356855 A C 18 GENIC homozygous 48827892 15 55356983 55356984 C T 18 GENIC possibly homozygous 48827894 15 55357151 55357153 AT -- 10 GENIC homozygous 48827896 15 55358076 55358077 G A 24 GENIC homozygous 48827898 15 55359221 55359222 G A 29 GENIC homozygous 48314250 15 55359274 55359275 G A 23 GENIC homozygous 48314251 15 55359622 55359623 T A 1 GENIC homozygous 48827902 15 55359624 55359625 T A 1 GENIC homozygous 48827904 15 55359627 55359630 GAG --- 1 GENIC homozygous 48959052 15 55359819 55359820 G A 17 GENIC possibly homozygous 48827908 15 55362021 55362022 G A 21 GENIC homozygous 48827910 15 55362046 55362047 G A 23 GENIC possibly homozygous 48827912 15 55363780 55363781 G A 30 GENIC possibly homozygous 48827914 15 55366098 55366099 A C 10 GENIC homozygous 48314258 15 55367143 55367144 T C 17 GENIC possibly homozygous 48314260 15 55368416 55368417 A AGT 12 GENIC possibly homozygous 48959054 15 55371555 55371559 TCTG ---- 3 GENIC homozygous 48827916 15 55381493 55381494 C T 29 GENIC possibly homozygous 48827926 15 55374624 55374625 C - 3 GENIC homozygous 48507269 15 55374903 55374904 C A 15 GENIC possibly homozygous 48827918 15 55377145 55377146 G A 15 GENIC homozygous 48827922 15 55380798 55380802 AACT ---- 8 GENIC homozygous 48827924 15 55382529 55382530 A AG 3 GENIC homozygous 48507271 15 55383516 55383517 T - 3 GENIC heterozygous 48314275 15 55383521 55383522 A G 5 GENIC heterozygous 48314276 15 55386414 55386415 T C 29 GENIC homozygous 48314278 15 55387911 55387912 G GGA 2 GENIC heterozygous 48827928 15 55392260 55392261 G A 6 GENIC heterozygous 48827930 15 55394668 55394669 C T 29 GENIC homozygous 48827936 15 55395360 55395444 CTGCACAGCTCCAGAGGACTCAATATTCCTGGAGAAGTCACCCCAAAACTGCACTATGGTCTCAGGCACCAGCCTGCCACCTCT ------------------------------------------------------------------------------------ 12 GENIC homozygous 48959056 15 55395600 55395601 G C 3 GENIC homozygous 48314284 15 55395604 55395605 G C 2 GENIC homozygous 48314285 15 55395729 55395732 TTG --- 2 GENIC heterozygous 48314286 15 55395905 55395906 G GA 3 GENIC homozygous 48314287 15 55399432 55399433 T C 17 GENIC homozygous 48314289 15 55400634 55400635 A G 16 GENIC homozygous 48314291 15 55401666 55401667 C T 3 GENIC homozygous 48314292 15 55401817 55401818 A G 19 GENIC possibly homozygous 48314293 15 55403661 55403662 C CACAGACACAGAG 10 GENIC homozygous 48959058 15 55404776 55404777 A G 10 GENIC possibly homozygous 48314296 15 55404879 55404880 G T 14 GENIC possibly homozygous 48827944 15 55405841 55405842 T C 14 GENIC possibly homozygous 48314297 15 55407710 55407711 A G 15 GENIC homozygous 48314300 15 55407963 55407964 T C 21 GENIC possibly homozygous 48314301 15 55408845 55408846 C A 19 GENIC homozygous 48827946 15 55409092 55409093 A G 14 GENIC homozygous 48314302 15 55409299 55409300 C - 12 GENIC possibly homozygous 48314303 15 55410539 55410540 G A 18 GENIC homozygous 48827948 15 55413416 55413417 T G 18 GENIC possibly homozygous 48827950 15 55413756 55413757 A - 1 GENIC homozygous 48827952 15 55414224 55414225 T TTGACCAGGGTCACCTCCTAGA 4 GENIC heterozygous 48314306 15 55415016 55415017 C - 1 GENIC homozygous 48507279 15 55416221 55416222 G T 8 GENIC homozygous 48827954 15 55417680 55417681 G A 12 GENIC possibly homozygous 48827956 15 55421586 55421587 T C 27 GENIC homozygous 48314317 15 55422448 55422449 G A 29 GENIC possibly homozygous 48827962 15 55422538 55422539 C T 19 GENIC possibly homozygous 48827964 15 55422702 55422703 G A 27 GENIC homozygous 48827966 15 55423686 55423687 C T 9 GENIC possibly homozygous 48827968 15 55426235 55426236 G T 20 GENIC homozygous 48314322 15 55429256 55429257 G A 7 GENIC possibly homozygous 48314327 15 55430496 55430497 G GAT 14 GENIC heterozygous 48314329 15 55433011 55433012 G A 13 GENIC homozygous 48827970 15 55433747 55433757 CACCTTGACC ---------- 2 GENIC homozygous 48827972 15 55434687 55434688 A AC 13 GENIC homozygous 48314338 15 55437552 55437553 T C 12 GENIC homozygous 48314347 15 55438032 55438033 T C 18 GENIC homozygous 48314348 15 55439718 55439720 CC -- 15 GENIC homozygous 48314350 15 55441737 55441738 T A 12 GENIC homozygous 48314352 15 55441739 55441740 A C 11 GENIC homozygous 48314353 15 55441815 55441816 T G 21 GENIC heterozygous 48314354 15 55442914 55442915 T C 3 GENIC homozygous 48827974 15 55444577 55444578 G A 15 GENIC possibly homozygous 48827976 15 55448426 55448427 T G 2 GENIC homozygous 48959060 15 55448573 55448574 A C 18 GENIC homozygous 48314366 15 55448607 55448608 T TGTC 9 GENIC homozygous 48314367 15 55449199 55449200 T C 12 GENIC possibly homozygous 48314368 15 55449763 55449764 C T 9 GENIC homozygous 48314369 15 55450184 55450185 T C 11 GENIC heterozygous 48314370 15 55450347 55450357 GGACAGGATG ---------- 7 GENIC possibly homozygous 48314371 15 55450802 55450803 T A 27 GENIC possibly homozygous 48314372 15 55451136 55451137 A G 14 GENIC homozygous 48314374 15 55451302 55451303 C G 18 GENIC possibly homozygous 48827978 15 55451426 55451427 T A 15 GENIC possibly homozygous 48314375 15 55451791 55451792 A G 5 GENIC homozygous 48827980 15 55452710 55452711 G A 24 GENIC homozygous 48314376 15 55453993 55453994 A C 9 GENIC homozygous 48314378 15 55454273 55454274 T C 25 GENIC possibly homozygous 48314379 15 55455145 55455146 G GA 6 GENIC homozygous 48314380 15 55455404 55455406 GG -- 2 GENIC homozygous 48314381 15 55455431 55455432 T TCATTTGGATAACCCTAGGAAGGTCACTGGGGATGGAAAACACAG 1 GENIC homozygous 48959062 15 55455478 55455479 A G 20 GENIC possibly homozygous 48314382 15 55456533 55456534 T C 16 GENIC homozygous 48314383 15 55457279 55457280 A G 27 GENIC homozygous 48314384 15 55457653 55457654 C T 18 GENIC possibly homozygous 48314385 15 55462399 55462400 A G 16 GENIC possibly homozygous 48314387 15 55462803 55462804 C T 28 GENIC homozygous 48314388 15 55463092 55463093 A C 24 GENIC homozygous 48314390 15 55463983 55463984 C T 19 GENIC homozygous 48314391 15 55465417 55465418 G A 22 GENIC possibly homozygous 48314392