chr start stop reference nuc variant nuc depth genic status zygosity variant ID 14 12159547 12159548 C T 24 GENIC homozygous 48519264 14 12159625 12159626 C A 21 GENIC homozygous 48519266 14 12159747 12159748 C T 13 GENIC homozygous 48519268 14 12159838 12159842 GTGC ---- 7 GENIC heterozygous 49335675 14 12159840 12159842 GC -- 5 GENIC heterozygous 48519270 14 12160038 12160039 A G 12 GENIC homozygous 48519272 14 12160106 12160107 T G 18 GENIC homozygous 48519274 14 12160326 12160327 C T 20 GENIC homozygous 48519276 14 12160387 12160388 T TA 15 GENIC homozygous 48519278 14 12160485 12160486 G A 10 GENIC homozygous 48519280 14 12160995 12160996 G A 18 GENIC homozygous 48519281 14 12161372 12161375 GGG --- 7 GENIC homozygous 48519283 14 12161532 12161533 A G 15 GENIC homozygous 48519285 14 12161654 12161655 G A 11 GENIC homozygous 48519287 14 12161824 12161825 A G 19 GENIC homozygous 48519289 14 12161829 12161830 A G 18 GENIC homozygous 48519291 14 12162601 12162602 T C 21 GENIC homozygous 48519293 14 12162682 12162683 A - 23 GENIC homozygous 48519295 14 12162860 12162861 T C 17 GENIC homozygous 48519297 14 12163011 12163012 T C 32 GENIC homozygous 48519299 14 12163208 12163209 G GTTGCTGGTTAGCCCGGTTA 21 GENIC homozygous 48519301 14 12163269 12163270 T C 19 GENIC homozygous 48519305 14 12163304 12163305 A C 25 GENIC homozygous 48519307 14 12163331 12163332 G A 21 GENIC homozygous 48519309 14 12163461 12163462 C CAG 17 GENIC homozygous 48519311 14 12163469 12163470 A G 20 GENIC homozygous 48519313 14 12163507 12163508 G A 22 GENIC homozygous 48519315 14 12163550 12163551 T G 20 GENIC homozygous 48519317 14 12164126 12164127 G A 30 GENIC homozygous 48519319 14 12164505 12164506 T C 23 GENIC homozygous 48519321 14 12164652 12164653 A G 11 GENIC homozygous 48519323 14 12164801 12164802 T C 12 GENIC homozygous 48519325 14 12164878 12164879 C G 14 GENIC homozygous 48519327 14 12166495 12166503 CACACACA -------- 14 GENIC homozygous 48519329 14 12166527 12166528 G GAC 24 GENIC possibly homozygous 48519335 14 12166822 12166823 C T 16 GENIC homozygous 48519338 14 12166827 12166828 A ACT 15 GENIC homozygous 48519340 14 12166844 12166850 CACACA ------ 15 GENIC possibly homozygous 48519342 14 12166848 12166850 CA -- 15 GENIC heterozygous 49249066 14 12166991 12166992 C T 17 GENIC homozygous 48519346 14 12167505 12167506 G T 29 GENIC homozygous 48519348 14 12167580 12167581 G A 24 GENIC homozygous 48519350 14 12167590 12167591 C T 21 GENIC homozygous 48519352 14 12167642 12167643 A T 21 GENIC homozygous 48519354 14 12167846 12167847 C T 24 GENIC homozygous 48519356 14 12167851 12167852 T C 24 GENIC homozygous 48519358 14 12167888 12167889 C T 27 GENIC homozygous 48519359 14 12167905 12167906 C A 25 GENIC homozygous 48519361 14 12167906 12167907 A C 24 GENIC homozygous 48519363 14 12167976 12167977 A G 13 GENIC homozygous 48519366 14 12168118 12168120 CT -- 14 GENIC homozygous 48519368 14 12168199 12168200 T C 26 GENIC homozygous 48519370 14 12168295 12168296 T C 26 GENIC homozygous 48519372 14 12168339 12168340 T C 24 GENIC homozygous 48519374 14 12168346 12168347 C T 26 GENIC homozygous 48519376 14 12168484 12168485 T A 32 GENIC homozygous 48519378 14 12168491 12168492 G A 32 GENIC homozygous 48519380 14 12168525 12168526 C T 30 GENIC homozygous 48519382 14 12168635 12168636 T C 25 GENIC homozygous 48519384 14 12168636 12168637 G A 26 GENIC homozygous 48519386 14 12168694 12168695 C T 18 GENIC homozygous 48519388 14 12168713 12168714 T TC 16 GENIC homozygous 49275952 14 12168714 12168715 T TCCCAGGTCCATCCTTCCC 16 GENIC homozygous 48519392 14 12168723 12168724 G A 16 GENIC homozygous 48519394 14 12168725 12168726 T C 16 GENIC homozygous 48519398 14 12168905 12168906 G A 13 GENIC homozygous 48519401 14 12168930 12168932 TA -- 13 GENIC homozygous 49275953 14 12168933 12168934 A AAG 13 GENIC homozygous 49275954 14 12168941 12168942 A G 13 GENIC homozygous 48519403 14 12169101 12169102 G A 16 GENIC homozygous 48519405 14 12169830 12169831 C CT 19 GENIC homozygous 48519407 14 12169994 12169995 A G 19 GENIC homozygous 48519409 14 12170097 12170098 T C 16 GENIC homozygous 48519411 14 12170116 12170117 T G 19 GENIC homozygous 48519413 14 12170120 12170121 G A 17 GENIC homozygous 48519415 14 12170145 12170146 T C 19 GENIC homozygous 48519417 14 12170310 12170311 A T 17 GENIC homozygous 48519419 14 12170360 12170361 C T 15 GENIC homozygous 48944107 14 12170361 12170362 T C 15 GENIC homozygous 49275955 14 12170368 12170369 T C 14 GENIC homozygous 48519421 14 12170855 12170856 G A 26 GENIC homozygous 48519423 14 12171610 12171611 C CG 27 GENIC homozygous 48519425 14 12171884 12171885 T G 16 GENIC homozygous 48519427 14 12172091 12172092 T TTATATTATTTTTTTTTGTTTCTTTTTTTCGGAGCTGGG 27 GENIC homozygous 49275956 14 12172126 12172127 A G 20 GENIC homozygous 48519429 14 12172423 12172424 A G 24 GENIC homozygous 48519431 14 12172502 12172503 T - 18 GENIC homozygous 48519433 14 12172658 12172659 C T 16 GENIC homozygous 48519435 14 12173017 12173018 T A 23 GENIC homozygous 48519437 14 12173021 12173022 G T 24 GENIC homozygous 48519439 14 12173153 12173154 A - 22 GENIC homozygous 48519441 14 12173358 12173359 G A 19 GENIC homozygous 48519443 14 12173511 12173512 T C 22 GENIC homozygous 48519445 14 12173549 12173550 A G 27 GENIC homozygous 48519447 14 12174156 12174157 A G 21 GENIC homozygous 48519449 14 12174392 12174393 C T 15 GENIC homozygous 48519451 14 12174438 12174439 T C 20 GENIC homozygous 48519453 14 12174702 12174703 A G 13 GENIC homozygous 48519455 14 12175155 12175156 A G 12 GENIC homozygous 48519457 14 12175211 12175212 T C 8 GENIC homozygous 48519459 14 12175423 12175424 A - 21 GENIC possibly homozygous 48519463 14 12175661 12175662 G GAC 18 GENIC heterozygous 48519465 14 12175661 12175662 G GACAC 18 GENIC heterozygous 48519467 14 12175661 12175662 G GACACAC 18 GENIC heterozygous 48519469 14 12176082 12176083 T TG 22 GENIC homozygous 48519471 14 12176598 12176599 C T 19 GENIC homozygous 48519473 14 12176627 12176628 A AC 22 GENIC homozygous 48519475 14 12177604 12177605 C G 23 GENIC homozygous 48519477 14 12177622 12177623 C T 25 GENIC homozygous 48519479 14 12177637 12177638 C T 24 GENIC homozygous 48519481 14 12177647 12177648 C T 24 GENIC homozygous 48519483 14 12177648 12177649 A G 24 GENIC homozygous 48519485 14 12178842 12178843 T - 6 GENIC homozygous 48519489 14 12179735 12179736 T A 31 GENIC homozygous 48519492 14 12180981 12180983 GT -- 14 GENIC heterozygous 49299373 14 12181752 12181753 C T 24 GENIC homozygous 48519494 14 12181938 12181939 G C 21 GENIC homozygous 48519496 14 12181959 12181960 T TGGTGAGGCA 25 GENIC homozygous 48519498 14 12181963 12181964 C G 26 GENIC homozygous 48519500 14 12182290 12182294 GTCT ---- 15 GENIC homozygous 49299374 14 12183331 12183332 T TA 11 GENIC homozygous 48519504 14 12185203 12185204 G GA 17 GENIC homozygous 48519506 14 12185283 12185284 C G 20 GENIC homozygous 48519508 14 12185425 12185429 CCTT ---- 25 GENIC homozygous 48519510 14 12185466 12185467 T C 33 GENIC homozygous 48519512 14 12185539 12185540 A G 27 GENIC homozygous 48519514 14 12185598 12185599 C T 17 GENIC homozygous 48519516 14 12185606 12185607 G C 16 GENIC homozygous 48519518 14 12185608 12185609 C T 16 GENIC homozygous 48519520 14 12185762 12185765 AAA --- 18 GENIC heterozygous 48519522 14 12185763 12185765 AA -- 18 GENIC possibly homozygous 48944109 14 12186137 12186138 A G 24 GENIC homozygous 48519524 14 12186776 12186777 C G 18 GENIC homozygous 48519526 14 12187164 12187165 A G 26 GENIC homozygous 48519528 14 12187251 12187252 C T 25 GENIC homozygous 48519530 14 12187988 12187989 G A 23 GENIC homozygous 48519532 14 12190079 12190080 T TC 6 GENIC homozygous 48519534 14 12190445 12190446 A G 29 GENIC homozygous 48519536 14 12190527 12190528 T C 20 GENIC homozygous 48519538 14 12190662 12190663 G A 13 GENIC homozygous 48519539 14 12190709 12190730 AGTAACCGCGTGGCGGGTGAA --------------------- 8 GENIC homozygous 48519541 14 12190992 12190993 G A 31 GENIC homozygous 48519545 14 12191075 12191076 G A 27 GENIC homozygous 48519548 14 12191086 12191087 A G 28 GENIC homozygous 48519550 14 12191151 12191152 G A 26 GENIC homozygous 48519552 14 12191291 12191292 T C 29 GENIC homozygous 48519554 14 12191580 12191581 T C 18 GENIC homozygous 48519556 14 12194593 12194594 C CT 1 GENIC homozygous 49335678 14 12198469 12198470 T C 19 GENIC homozygous 48519570 14 12198480 12198481 G C 17 GENIC homozygous 48519572 14 12198602 12198603 A G 15 GENIC homozygous 48519574 14 12198930 12198931 G A 21 GENIC homozygous 48519576 14 12199080 12199081 T C 22 GENIC homozygous 48519578 14 12199122 12199123 C T 25 GENIC homozygous 48519580 14 12199200 12199201 T C 24 GENIC homozygous 48519582 14 12199578 12199579 G C 25 GENIC homozygous 48519584 14 12199861 12199862 A T 21 GENIC homozygous 48519586 14 12199870 12199871 G A 22 GENIC homozygous 48519588 14 12199978 12199979 T C 19 GENIC homozygous 48519590 14 12200075 12200076 A AT 13 GENIC homozygous 48519592 14 12200125 12200126 T C 17 GENIC homozygous 48519594 14 12200313 12200314 G A 2 GENIC homozygous 48519596 14 12200372 12200373 G C 7 GENIC homozygous 48519598 14 12200384 12200385 A G 7 GENIC homozygous 48519600 14 12200387 12200388 G - 7 GENIC homozygous 48519602 14 12200459 12200460 G A 7 GENIC homozygous 48519604 14 12200808 12200809 A - 1 GENIC homozygous 48519618 14 12200985 12200986 G T 12 GENIC homozygous 48519620 14 12201007 12201008 A G 16 GENIC homozygous 48519622 14 12201014 12201015 G A 17 GENIC homozygous 48519624 14 12201016 12201017 G A 19 GENIC homozygous 48519626 14 12201128 12201129 C T 14 GENIC homozygous 48519628 14 12201407 12201408 A G 13 GENIC homozygous 48519630 14 12201523 12201524 G A 12 GENIC homozygous 48519632 14 12201581 12201585 TTTA ---- 10 GENIC heterozygous 49395390 14 12201582 12201585 TTA --- 7 GENIC heterozygous 48519634 14 12201689 12201690 T C 13 GENIC homozygous 48519636 14 12201940 12201941 G A 22 GENIC homozygous 48519640 14 12202039 12202040 A G 22 GENIC homozygous 48519642 14 12202151 12202157 TTGTTG ------ 30 GENIC homozygous 48519644 14 12202241 12202242 C T 15 GENIC homozygous 48519646 14 12202323 12202324 C G 16 GENIC homozygous 48519648 14 12202666 12202667 A G 13 GENIC homozygous 48519650 14 12202924 12202925 G - 9 GENIC homozygous 48519652 14 12202940 12202941 G A 9 GENIC homozygous 48519654 14 12202950 12202951 G C 7 GENIC homozygous 48519656 14 12203003 12203004 C T 9 GENIC homozygous 48519657 14 12203011 12203012 C T 11 GENIC homozygous 48519659 14 12205058 12205065 TGGTGGC ------- 14 GENIC homozygous 48519671 14 12203020 12203021 T C 11 GENIC homozygous 48519661 14 12203327 12203328 C T 21 GENIC homozygous 48519663 14 12204591 12204592 T - 23 GENIC homozygous 48519665 14 12204679 12204680 A AT 14 GENIC homozygous 48519667 14 12205028 12205029 T C 16 GENIC homozygous 48519669 14 12205136 12205137 T C 20 GENIC homozygous 48519674 14 12205246 12205247 A G 17 GENIC homozygous 48519676 14 12205429 12205430 C T 20 GENIC homozygous 48519678 14 12205626 12205627 G GA 21 GENIC homozygous 48519680 14 12205721 12205722 T C 28 GENIC homozygous 48519682 14 12206181 12206182 C T 18 GENIC homozygous 48519684 14 12206270 12206271 A T 28 GENIC homozygous 48519686 14 12206281 12206282 A T 24 GENIC homozygous 48519688 14 12206329 12206330 T C 13 GENIC homozygous 48519690 14 12206352 12206353 G A 15 GENIC homozygous 48519692 14 12206406 12206407 A G 24 GENIC homozygous 48519694 14 12206437 12206438 C A 21 GENIC homozygous 48519696 14 12206439 12206440 A G 21 GENIC homozygous 48519697 14 12206442 12206443 T C 21 GENIC homozygous 48519699 14 12206453 12206454 C T 21 GENIC homozygous 48519701 14 12206484 12206485 T C 17 GENIC homozygous 48519703 14 12206485 12206486 T C 17 GENIC homozygous 48519705 14 12206502 12206503 A C 14 GENIC homozygous 48519707 14 12206546 12206547 A G 19 GENIC homozygous 48519709 14 12206725 12206726 T C 25 GENIC homozygous 48519711 14 12206755 12206756 C T 26 GENIC homozygous 48519712 14 12206796 12206797 G T 20 GENIC homozygous 48519714 14 12206826 12206827 G T 21 GENIC homozygous 48519716 14 12206839 12206840 G C 21 GENIC homozygous 48519718 14 12206929 12206930 C T 28 GENIC homozygous 48519720 14 12206951 12206952 G A 32 GENIC homozygous 48519723 14 12207090 12207091 A G 26 GENIC homozygous 48519725 14 12207318 12207319 C T 32 GENIC homozygous 48519727 14 12207412 12207413 G A 36 GENIC homozygous 48519729 14 12207484 12207485 G A 28 GENIC homozygous 48519731 14 12208023 12208034 CAGGGTGATAA ----------- 21 GENIC homozygous 48519733 14 12208241 12208242 G A 22 GENIC homozygous 48519735 14 12208424 12208425 A T 27 GENIC homozygous 48519737 14 12208492 12208493 C T 27 GENIC homozygous 48519739 14 12208595 12208596 G A 26 GENIC homozygous 48519741 14 12208696 12208697 G A 26 GENIC homozygous 48519743 14 12209406 12209407 G T 26 GENIC homozygous 48519745 14 12209630 12209632 CC -- 10 GENIC homozygous 49299378 14 12209649 12209657 TCTCTCTG -------- 1 GENIC homozygous 49335679 14 12209960 12209961 G GA 17 GENIC homozygous 48519749 14 12210016 12210017 T TA 2 GENIC homozygous 48519751 14 12210017 12210018 T TA 2 GENIC homozygous 48519755 14 12210019 12210020 T A 3 GENIC homozygous 48519757 14 12210179 12210180 G A 13 GENIC homozygous 48519758 14 12210240 12210241 C T 14 GENIC homozygous 48519760 14 12210445 12210446 G T 21 GENIC homozygous 48519762 14 12210725 12210726 C T 22 GENIC homozygous 48519764 14 12211045 12211046 A G 18 GENIC homozygous 48519766 14 12211104 12211105 G A 21 GENIC homozygous 48519768 14 12211624 12211625 C T 18 GENIC homozygous 48519770 14 12211877 12211878 G T 21 GENIC homozygous 48519772 14 12212185 12212186 T C 19 GENIC homozygous 48519774 14 12212211 12212212 A G 24 GENIC homozygous 48519776 14 12212215 12212216 G A 25 GENIC homozygous 48519778 14 12212403 12212404 A G 19 GENIC homozygous 48519780 14 12212829 12212830 C T 26 GENIC homozygous 48519782 14 12212896 12212899 TTG --- 31 GENIC homozygous 48519784 14 12213088 12213089 G T 11 GENIC homozygous 48519786 14 12213159 12213160 G C 21 GENIC homozygous 48519788 14 12213478 12213479 C T 14 GENIC homozygous 48519789 14 12213696 12213697 G C 18 GENIC homozygous 48519791 14 12213697 12213698 A C 19 GENIC homozygous 48519793 14 12213870 12213871 A G 22 GENIC homozygous 48519795 14 12213912 12213913 G C 12 GENIC heterozygous 49249091 14 12213943 12213949 TGTGTA ------ 9 GENIC heterozygous 49335681 14 12213947 12213949 TA -- 10 GENIC heterozygous 49299381 14 12213964 12213970 GTGTGC ------ 25 GENIC homozygous 48519800 14 12214002 12214003 T TTG 21 GENIC homozygous 48519808 14 12214025 12214026 T TGC 13 GENIC homozygous 49299382 14 12214030 12214032 GC -- 11 GENIC homozygous 48519814 14 12214034 12214035 G GTGTGCA 12 GENIC homozygous 49299383 14 12214078 12214079 G GC 12 GENIC homozygous 49299384 14 12214079 12214080 A ATGTAT 12 GENIC homozygous 49299385 14 12214185 12214186 A AGT 23 GENIC homozygous 48519827 14 12214223 12214225 TG -- 25 GENIC homozygous 48519829 14 12214281 12214283 TG -- 17 GENIC homozygous 48519831 14 12214342 12214344 GT -- 14 GENIC homozygous 48519833 14 12214375 12214376 T TGC 15 GENIC homozygous 48519839 14 12214382 12214383 G GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA 11 GENIC homozygous 49299386 14 12214686 12214688 CA -- 18 GENIC homozygous 48519845 14 12215163 12215164 T - 20 GENIC homozygous 48519847 14 12215436 12215437 C T 21 GENIC homozygous 48519849 14 12215618 12215619 G A 20 GENIC homozygous 48519851 14 12215733 12215734 T - 16 GENIC homozygous 48944115 14 12216430 12216431 A G 27 GENIC homozygous 48519853 14 12216686 12216687 C T 21 GENIC homozygous 48519855 14 12216716 12216717 G T 18 GENIC homozygous 48519857 14 12216801 12216802 C T 19 GENIC homozygous 48519859 14 12217214 12217215 G T 19 GENIC homozygous 48519861 14 12217243 12217244 A - 22 GENIC homozygous 48519863 14 12217282 12217283 G A 22 GENIC homozygous 48519865 14 12217410 12217411 A G 20 GENIC homozygous 48519867 14 12218130 12218132 GT -- 5 GENIC homozygous 48519869 14 12232034 12232035 G A 16 GENIC homozygous 48519877 14 12232114 12232115 G A 23 GENIC homozygous 48519879 14 12237773 12237774 C T 24 GENIC homozygous 48519881 14 12238925 12238929 CTCT ---- 6 GENIC heterozygous 49335682 14 12248835 12248895 AACTGTATTAAGTAAAGGTTTGCAGCATCAGGACGGTTGAGAACCACTGTTCTAGATAAA ------------------------------------------------------------ 4 GENIC homozygous 49299399 14 12249182 12249184 AC -- 4 GENIC heterozygous 48519887 14 12253068 12253069 T C 16 GENIC homozygous 48519889