chr start stop reference nuc variant nuc depth genic status zygosity variant ID 13 56271128 56271129 T TTA 3 INTERGENIC homozygous 49763848 13 56271909 56271910 A AT 9 INTERGENIC homozygous 49763849 13 56272085 56272087 GA -- 16 INTERGENIC homozygous 49763850 13 56272239 56272240 A G 27 INTERGENIC homozygous 49763851 13 56273402 56273403 T C 13 INTERGENIC homozygous 49763853 13 56275402 56275403 A T 12 GENIC homozygous 49763854 13 56275566 56275567 A C 15 GENIC homozygous 49763855 13 56275709 56275710 G A 22 GENIC homozygous 49763856 13 56276170 56276171 T A 18 GENIC homozygous 49763857 13 56277221 56277222 A G 1 GENIC homozygous 49763858 13 56277268 56277269 C T 2 GENIC homozygous 49763859 13 56277703 56277704 T C 15 GENIC homozygous 49763860 13 56278024 56278032 CATCCATC -------- 3 GENIC homozygous 49763861 13 56278119 56278120 T - 5 GENIC heterozygous 50518919 13 56278121 56278156 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT ----------------------------------- 5 GENIC heterozygous 50518921 13 56278157 56278158 T C 4 GENIC homozygous 50518922 13 56278159 56278160 T C 4 GENIC homozygous 50518923 13 56278161 56278162 T C 4 GENIC homozygous 50518924 13 56278240 56278241 T C 11 GENIC homozygous 49763862 13 56278704 56278705 C T 22 GENIC homozygous 49763863 13 56279178 56279179 T C 24 GENIC homozygous 49763864 13 56279294 56279295 T C 15 GENIC homozygous 49763865 13 56279395 56279396 T A 22 GENIC homozygous 49763866 13 56280087 56280088 C A 28 GENIC homozygous 49763867 13 56280655 56280656 C T 29 INTERGENIC homozygous 49763868 13 56281056 56281057 T TATACACACACAA 36 INTERGENIC homozygous 49763869 13 56282184 56282185 C CTTT 6 GENIC homozygous 49763870 13 56282422 56282423 A - 9 GENIC heterozygous 50232170 13 56282449 56282450 T A 8 GENIC homozygous 49763871 13 56282859 56282860 T G 14 GENIC homozygous 49763872 13 56282956 56282957 C T 22 GENIC homozygous 49763873 13 56283142 56283143 A G 15 GENIC homozygous 49763874 13 56283982 56283983 T TGA 20 GENIC homozygous 49763875 13 56284424 56284425 T G 20 GENIC homozygous 49763876 13 56284590 56284591 G A 14 GENIC homozygous 49763877 13 56284594 56284595 C T 12 GENIC homozygous 49763878 13 56284605 56284606 C T 14 GENIC homozygous 49763879 13 56284727 56284728 A C 23 GENIC homozygous 49763880 13 56285181 56285182 A G 22 INTERGENIC possibly homozygous 49763881 13 56285249 56285250 G A 12 INTERGENIC homozygous 49763882 13 56285382 56285383 A G 18 INTERGENIC homozygous 49763883 13 56286040 56286041 T G 6 INTERGENIC homozygous 49763885 13 56286173 56286174 G A 12 INTERGENIC homozygous 49763887 13 56286525 56286526 G A 14 INTERGENIC homozygous 49763888 13 56286554 56286555 G C 10 INTERGENIC homozygous 49763889 13 56287413 56287414 T TGA 18 GENIC homozygous 49763890 13 56288411 56288412 C CACAT 11 GENIC homozygous 49763891 13 56288433 56288439 ACACAC ------ 4 GENIC homozygous 49763892 13 56289194 56289195 T C 17 GENIC homozygous 49763893 13 56289419 56289420 A G 25 GENIC homozygous 49763894 13 56289452 56289453 C CGTTTT 17 GENIC homozygous 49763895 13 56289543 56289544 C T 23 GENIC homozygous 49763896 13 56290074 56290075 C G 12 GENIC homozygous 49763897 13 56290172 56290173 T A 17 GENIC homozygous 49763898 13 56290681 56290682 C A 15 GENIC homozygous 49763899 13 56290874 56290875 A C 9 GENIC homozygous 49763900 13 56290982 56290983 C T 8 GENIC homozygous 49763901 13 56291011 56291012 G GAAAAAA 6 GENIC homozygous 49763902 13 56291044 56291045 G C 10 GENIC homozygous 49763904 13 56291464 56291465 A G 11 GENIC homozygous 49763906 13 56291539 56291540 A - 24 GENIC homozygous 49763907 13 56292091 56292092 G A 12 GENIC homozygous 49763908 13 56292544 56292545 C A 18 GENIC homozygous 49763909 13 56294148 56294149 G GCA 6 INTERGENIC heterozygous 49763911 13 56294149 56294153 CACA ---- 6 INTERGENIC heterozygous 50580503 13 56294247 56294248 T - 10 INTERGENIC homozygous 49763913 13 56295172 56295173 A - 14 INTERGENIC homozygous 49763914 13 56295429 56295430 T - 17 INTERGENIC homozygous 49763915 13 56295582 56295583 C T 12 INTERGENIC homozygous 49763916 13 56296626 56296627 T TA 10 INTERGENIC homozygous 49763917 13 56298074 56298075 A G 12 GENIC homozygous 49763918 13 56298903 56298904 G A 13 GENIC homozygous 49763919 13 56299017 56299022 AAAAG ----- 17 GENIC homozygous 49763920 13 56299444 56299445 G GCCA 1 GENIC homozygous 50564185 13 56299459 56299460 A ACCG 1 GENIC homozygous 50564187 13 56299483 56299484 C T 8 GENIC homozygous 49763929 13 56300164 56300167 TTT --- 13 GENIC homozygous 49954196 13 56300348 56300349 G A 22 GENIC homozygous 49763930 13 56300474 56300475 T C 11 GENIC homozygous 49954197 13 56300483 56300484 G C 11 GENIC homozygous 50564189 13 56300486 56300487 C A 11 GENIC homozygous 50564191 13 56300493 56300502 TTGTCCTCT --------- 11 GENIC homozygous 49763933 13 56300520 56300535 TCCTCCTCTTCCTCG --------------- 8 GENIC homozygous 49763937 13 56300601 56300607 TCCTCT ------ 12 GENIC homozygous 49763939 13 56301090 56301091 T C 20 GENIC homozygous 49763940 13 56301109 56301110 G C 17 GENIC homozygous 49763941 13 56301347 56301348 A C 9 GENIC homozygous 49763942 13 56301843 56301844 T A 10 GENIC homozygous 49763944 13 56301845 56301846 T C 10 GENIC homozygous 49763945 13 56301950 56301951 A G 14 GENIC homozygous 49763947 13 56302005 56302006 G A 13 GENIC homozygous 49763948 13 56302213 56302214 T C 20 GENIC homozygous 49763949 13 56302214 56302215 A G 19 GENIC homozygous 49763950 13 56302294 56302295 C T 15 GENIC homozygous 49763951 13 56302965 56302966 G A 12 GENIC homozygous 49763955 13 56303072 56303073 C G 7 GENIC homozygous 49763956 13 56303360 56303361 A G 16 GENIC homozygous 49763957 13 56303671 56303672 C G 15 GENIC homozygous 49763958 13 56303990 56303991 T C 24 GENIC homozygous 49763959 13 56304053 56304054 T C 15 GENIC homozygous 49763960 13 56304144 56304145 T C 22 GENIC homozygous 49763961 13 56304396 56304401 TAAAA ----- 8 GENIC homozygous 49763962 13 56304416 56304417 G T 9 GENIC homozygous 49763964 13 56304454 56304455 T A 12 GENIC homozygous 49763965 13 56304470 56304471 C CAGGT 14 GENIC homozygous 49763967 13 56304562 56304563 C - 17 GENIC homozygous 49763968 13 56306066 56306067 A G 23 GENIC homozygous 49763973 13 56304717 56304718 T C 11 GENIC homozygous 49763969 13 56305250 56305251 C A 12 GENIC homozygous 49763970 13 56305369 56305418 ACTGAGCCTCTTCAGTCTGTTGTTTAAGAGCTTCCCTTACCCAGCGCCC ------------------------------------------------- 13 GENIC homozygous 50564193 13 56306281 56306282 C T 17 GENIC homozygous 49763974 13 56306375 56306376 C T 25 GENIC homozygous 49763975 13 56306440 56306456 GAGGAAGGAAGGAAGA ---------------- 8 GENIC homozygous 49763976 13 56306886 56306887 A T 16 GENIC homozygous 49763978 13 56307534 56307535 G A 11 GENIC homozygous 49763979 13 56307629 56307630 C T 14 GENIC homozygous 49763980 13 56308003 56308004 G A 3 GENIC homozygous 49763981 13 56308528 56308658 AGAATAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTTTTTTTTTTTTTTTCGGAGCTGGGGACCGAACCCAGAGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCC ---------------------------------------------------------------------------------------------------------------------------------- 6 GENIC homozygous 50564197 13 56308792 56308793 A G 14 GENIC homozygous 49763988 13 56308955 56308956 C T 10 GENIC homozygous 49763989 13 56309080 56309081 T A 10 GENIC homozygous 49763990 13 56309499 56309500 G A 21 GENIC homozygous 49763991 13 56309723 56309724 C G 17 GENIC homozygous 49763992 13 56310640 56310641 G A 22 GENIC homozygous 49763993 13 56310967 56310968 A G 11 GENIC homozygous 49763994 13 56311455 56311456 G - 21 GENIC homozygous 49763996 13 56311540 56311545 TTTTT ----- 15 GENIC homozygous 49763997 13 56311720 56311721 C A 6 GENIC homozygous 49763999 13 56311721 56311722 T A 6 GENIC homozygous 49764000 13 56312002 56312003 T - 18 GENIC homozygous 49764001 13 56312934 56312935 A G 16 GENIC homozygous 49764002 13 56313016 56313017 T C 8 GENIC homozygous 49764003 13 56313293 56313294 A G 1 GENIC homozygous 49764006 13 56313322 56313323 C CAAAAA 4 GENIC homozygous 49764007 13 56313376 56313377 C A 18 GENIC homozygous 49764008 13 56314281 56314282 G A 9 GENIC homozygous 49764010 13 56314287 56314288 C T 8 GENIC homozygous 49764011 13 56314486 56314487 T - 14 GENIC homozygous 50046504 13 56314700 56314701 T - 16 GENIC homozygous 49764012 13 56314773 56314774 C T 24 GENIC homozygous 49764013 13 56314994 56314995 G A 24 GENIC homozygous 49764014 13 56315003 56315004 A C 24 GENIC homozygous 49764015 13 56315085 56315086 T C 28 GENIC homozygous 49764016 13 56315086 56315087 C A 28 GENIC homozygous 50564199 13 56315216 56315217 A ATGTT 13 GENIC homozygous 49764017 13 56315562 56315563 T C 25 GENIC homozygous 49764018 13 56316483 56316484 T - 19 GENIC homozygous 49764019 13 56320153 56320155 TT -- 8 INTERGENIC heterozygous 49764020 13 56320154 56320155 T - 8 INTERGENIC heterozygous 49764021 13 56320433 56320444 TTTTTTTTTTT ----------- 9 INTERGENIC homozygous 49764022 13 56321166 56321167 G A 33 INTERGENIC homozygous 49764023 13 56321525 56321526 C CT 5 INTERGENIC heterozygous 49764024 13 56322462 56322463 A - 20 INTERGENIC heterozygous 49764026 13 56327904 56327906 TT -- 10 INTERGENIC heterozygous 50046506 13 56327905 56327906 T - 10 INTERGENIC heterozygous 49764027 13 56328278 56328279 C T 19 INTERGENIC homozygous 49764028 13 56330147 56330148 A AAGG 15 INTERGENIC homozygous 49764030 13 56330503 56330505 TG -- 3 INTERGENIC homozygous 50518934 13 56331240 56331241 C CAA 4 INTERGENIC heterozygous 49764032 13 56332409 56332410 C CAA 7 INTERGENIC heterozygous 49764033 13 56332409 56332410 C CA 7 INTERGENIC heterozygous 49764034 13 56341291 56341292 A G 28 GENIC homozygous 49764035 13 56342086 56342092 GTGTGT ------ 5 GENIC homozygous 49764036 13 56347223 56347224 T C 24 GENIC homozygous 49764038 13 56353891 56353892 G GT 4 GENIC homozygous 49764039 13 56355695 56355696 C CT 4 GENIC heterozygous 49764040 13 56356557 56356558 T - 8 GENIC heterozygous 50605277 13 56362891 56362895 AAAC ---- 3 GENIC homozygous 49764044 13 56365158 56365159 G GT 5 GENIC heterozygous 50518940 13 56365160 56365161 T - 5 GENIC heterozygous 49954265 13 56368218 56368219 G GTTCTTTTTTTT 15 GENIC homozygous 49764048 13 56370380 56370382 TG -- 6 GENIC heterozygous 49764050 13 56371900 56371901 A AGATG 5 INTERGENIC homozygous 50564203 13 56391338 56391339 T TTTTGG 1 INTERGENIC homozygous 50564205 13 56393261 56393262 A - 16 INTERGENIC homozygous 49764057 13 56397025 56397029 ATTT ---- 2 INTERGENIC homozygous 50564207 13 56406262 56406263 A - 7 INTERGENIC heterozygous 50430895 13 56407088 56407089 C CAAACAAAACAAAACTAGAGGGGGGGGAGAGGGGAGGGAGGCAGGGAGGGAGGGGGAAAGGGGG 6 INTERGENIC homozygous 50518961 13 56407914 56407915 A G 13 INTERGENIC homozygous 49764059 13 56408086 56408087 G - 11 INTERGENIC homozygous 49764063 13 56408264 56408265 T C 11 INTERGENIC homozygous 49764064 13 56408798 56408820 CTCTCTCTCGCTCTCGCTCTCG ---------------------- 8 INTERGENIC heterozygous 50564209 13 56409233 56409234 A T 11 INTERGENIC homozygous 49764069 13 56409599 56409600 A T 14 INTERGENIC homozygous 49764070 13 56409683 56409684 C CG 3 INTERGENIC homozygous 49764071 13 56409784 56409785 G A 9 INTERGENIC homozygous 49764073 13 56409906 56409907 C T 14 INTERGENIC homozygous 49764074 13 56411288 56411296 AGAGAGAG -------- 8 INTERGENIC homozygous 50564213 13 56411728 56411729 A AT 8 INTERGENIC heterozygous 49764077 13 56413572 56413573 A G 23 INTERGENIC homozygous 49764078 13 56416079 56416080 A - 9 INTERGENIC heterozygous 49764079 13 56416096 56416097 A T 12 INTERGENIC homozygous 49764080 13 56416254 56416255 T C 14 INTERGENIC homozygous 49764081 13 56416261 56416262 T C 13 INTERGENIC homozygous 49764082 13 56416657 56416658 C G 19 INTERGENIC homozygous 49764083 13 56417327 56417328 G GAAA 1 INTERGENIC homozygous 50518964 13 56418019 56418020 A C 19 INTERGENIC homozygous 49764087 13 56420975 56420976 A G 20 GENIC homozygous 49764088 13 56421078 56421079 T TAAA 15 GENIC homozygous 49764089 13 56421769 56421770 C CA 5 GENIC homozygous 50518967 13 56421771 56421772 C CAACAACAACAA 3 GENIC homozygous 50564215 13 56422642 56422643 T C 20 GENIC homozygous 49764091 13 56422932 56422933 T G 17 GENIC homozygous 49764092 13 56424341 56424342 T C 25 GENIC homozygous 49764093 13 56424492 56424493 A C 13 GENIC homozygous 49764094 13 56424699 56424700 G GTT 11 GENIC homozygous 49764096 13 56425356 56425357 A C 11 GENIC homozygous 49764097 13 56427202 56427203 C CT 7 GENIC homozygous 49764098 13 56427440 56427444 TTTT ---- 5 GENIC homozygous 50564219 13 56427761 56427762 A - 7 GENIC heterozygous 49764099 13 56428726 56428727 C CTT 17 INTERGENIC homozygous 49764101 13 56429498 56429502 ACAA ---- 12 INTERGENIC homozygous 49764102 13 56429885 56429886 G GTAGA 12 INTERGENIC homozygous 49764104 13 56430771 56430772 C CA 21 INTERGENIC homozygous 49764106 13 56432070 56432071 A G 19 INTERGENIC homozygous 49764107 13 56432144 56432145 T TA 12 INTERGENIC heterozygous 49764108 13 56432688 56432689 A C 11 INTERGENIC homozygous 50518972 13 56433629 56433630 T C 26 INTERGENIC homozygous 49764110 13 56434343 56434344 C T 16 INTERGENIC homozygous 49764117 13 56433670 56433671 T TTTTCTTTCTTTCTTTCTTTCTTTC 12 INTERGENIC homozygous 50564221 13 56433719 56433720 T - 11 INTERGENIC homozygous 49764113 13 56433725 56433726 T TTA 12 INTERGENIC homozygous 49764115 13 56434050 56434051 G A 20 INTERGENIC homozygous 49764116 13 56434311 56434312 G A 21 INTERGENIC homozygous 50518975 13 56434487 56434488 G GCAC 11 INTERGENIC homozygous 49764118 13 56435519 56435520 T A 9 INTERGENIC homozygous 49764119 13 56435635 56435637 CC -- 3 INTERGENIC homozygous 49764120 13 56436109 56436110 T C 3 INTERGENIC homozygous 49764121 13 56436179 56436180 A G 7 INTERGENIC homozygous 49764122 13 56437275 56437276 T C 11 INTERGENIC homozygous 49764124 13 56436995 56436996 G GAA 10 INTERGENIC heterozygous 50430933 13 56436996 56436997 A - 10 INTERGENIC heterozygous 49954452 13 56437270 56437271 G C 11 INTERGENIC homozygous 49764123 13 56437472 56437473 T - 2 INTERGENIC homozygous 50564223 13 56437474 56437489 TGTGTGTGTGTGTGT --------------- 1 INTERGENIC homozygous 50564225 13 56437494 56437495 T G 3 INTERGENIC homozygous 50564227 13 56437601 56437602 C T 13 INTERGENIC homozygous 49764125 13 56437828 56437829 A C 15 INTERGENIC homozygous 49764126 13 56438570 56438571 C T 15 GENIC homozygous 49764127 13 56442681 56442693 CTCTCTCTTTCT ------------ 4 GENIC heterozygous 50564229 13 56442683 56442693 CTCTCTTTCT ---------- 4 GENIC heterozygous 50564231 13 56443851 56443853 AA -- 17 GENIC heterozygous 50430937 13 56443852 56443853 A - 17 GENIC possibly homozygous 49764129 13 56444177 56444178 T - 13 GENIC homozygous 49764130 13 56446296 56446297 A G 19 GENIC homozygous 49764131 13 56446639 56446640 T TA 11 GENIC possibly homozygous 50564233 13 56446796 56446797 C CTGTGTGTGTGTGTG 3 GENIC homozygous 50518979 13 56447828 56447829 C T 25 GENIC homozygous 49764133 13 56448534 56448535 A G 24 GENIC homozygous 49764134 13 56448728 56448730 TA -- 7 GENIC possibly homozygous 49764136 13 56449941 56449942 T - 14 GENIC homozygous 49764137 13 56450089 56450090 A T 16 GENIC homozygous 49764138 13 56450123 56450124 A - 16 GENIC homozygous 49764139 13 56451292 56451293 T C 24 GENIC homozygous 49764143 13 56451567 56451576 TTTTTTTTT --------- 11 GENIC possibly homozygous 49764144 13 56452352 56452353 G A 18 GENIC homozygous 49764145 13 56452827 56452829 TG -- 10 GENIC heterozygous 49764146 13 56452915 56452916 A ACCACAGGTTTCTAAAT 25 GENIC homozygous 49764150 13 56454140 56454141 T A 26 GENIC homozygous 49764152 13 56455034 56455035 A - 22 GENIC homozygous 49764153 13 56456144 56456145 T - 23 GENIC heterozygous 49954460 13 56456624 56456626 TG -- 9 GENIC homozygous 49764154 13 56457225 56457226 G A 13 GENIC homozygous 50564235 13 56457239 56457240 A - 13 GENIC homozygous 49764155 13 56458176 56458177 T G 24 GENIC homozygous 49764156 13 56459167 56459168 T TA 21 GENIC homozygous 49764157 13 56460063 56460064 G A 9 GENIC homozygous 49764159 13 56460103 56460104 T C 11 GENIC homozygous 49764160 13 56460104 56460105 G A 11 GENIC homozygous 49764161 13 56460133 56460134 A T 15 GENIC homozygous 49764162 13 56460217 56460218 A AG 9 GENIC homozygous 49764163 13 56460754 56460755 A T 13 GENIC homozygous 49764164 13 56461122 56461123 C CT 2 GENIC homozygous 50518984 13 56461386 56461387 G A 20 GENIC homozygous 49764166 13 56461596 56461597 C CATA 8 GENIC homozygous 49764167 13 56462077 56462081 GCGC ---- 6 GENIC homozygous 49764168 13 56462084 56462098 CGCGCGCGCGCACA -------------- 6 GENIC homozygous 50564237 13 56462102 56462103 A T 9 GENIC homozygous 49764169 13 56462504 56462505 T G 20 GENIC homozygous 49764170 13 56462582 56462584 AA -- 3 GENIC homozygous 50564239