chr start stop reference nuc variant nuc depth genic status zygosity variant ID 12 11478515 11478516 G GC 8 GENIC homozygous 50049660 12 11479690 11479691 C CTT 10 GENIC homozygous 50049664 12 11479985 11479986 T C 15 GENIC homozygous 50049666 12 11480082 11480083 C T 12 GENIC homozygous 50049668 12 11480101 11480102 G A 10 GENIC homozygous 50049670 12 11480108 11480122 TCCCACTGAAGCGC -------------- 8 GENIC homozygous 50049672 12 11481328 11481329 A C 9 GENIC homozygous 50049674 12 11481426 11481427 A G 16 GENIC homozygous 50049676 12 11481460 11481461 T C 18 GENIC homozygous 50049678 12 11481472 11481473 C T 20 GENIC homozygous 50049680 12 11481727 11481728 C A 19 GENIC homozygous 50049682 12 11481806 11481807 C A 15 GENIC homozygous 50049684 12 11481970 11481971 C T 16 GENIC homozygous 50049686 12 11482130 11482131 T C 21 GENIC homozygous 50049688 12 11482558 11482560 TT -- 11 GENIC homozygous 50049690 12 11482630 11482631 A G 18 GENIC homozygous 50049692 12 11482763 11482764 T A 12 GENIC homozygous 50049694 12 11483276 11483277 A AGACG 11 GENIC homozygous 50049698 12 11483342 11483343 C T 14 GENIC homozygous 50049708 12 11483480 11483481 A G 12 GENIC homozygous 50049710 12 11483481 11483482 C T 12 GENIC homozygous 50049712 12 11483496 11483497 T A 12 GENIC homozygous 50049714 12 11483680 11483681 A C 15 GENIC homozygous 50049716 12 11483732 11483733 A G 21 GENIC homozygous 50049718 12 11483949 11483950 T A 8 GENIC homozygous 50049720 12 11484178 11484182 AGTT ---- 28 GENIC homozygous 50049722 12 11484211 11484212 T C 23 GENIC homozygous 50049724 12 11484384 11484385 C T 12 GENIC homozygous 50049726 12 11484892 11484893 A G 19 GENIC homozygous 50049728 12 11485195 11485196 A T 14 GENIC homozygous 50049730 12 11485461 11485465 GAAG ---- 9 GENIC homozygous 50049732 12 11485543 11485544 C CT 13 GENIC homozygous 50049734 12 11486094 11486095 T C 10 GENIC homozygous 50049736 12 11486328 11486329 C T 21 GENIC homozygous 50049738 12 11486369 11486370 G A 14 GENIC homozygous 50049740 12 11486534 11486535 C G 10 GENIC homozygous 50049742 12 11486563 11486564 C T 4 GENIC homozygous 50049744 12 11486693 11486694 G T 26 GENIC homozygous 50049746 12 11486800 11486801 G A 24 GENIC homozygous 50049750 12 11487233 11487234 T TTGTGTGTG 7 GENIC possibly homozygous 50049754 12 11487894 11487895 T TC 16 GENIC homozygous 50049756 12 11488074 11488075 T C 18 GENIC homozygous 50049758 12 11488239 11488240 A G 17 GENIC homozygous 50049760 12 11488279 11488280 C T 18 GENIC homozygous 50049762 12 11488721 11488722 C T 21 GENIC homozygous 50049764 12 11489194 11489195 T C 31 GENIC homozygous 50049766 12 11489228 11489229 G A 27 GENIC homozygous 50049768 12 11489294 11489302 AGATAGAT -------- 4 GENIC heterozygous 50530557 12 11482561 11482562 T A 11 GENIC homozygous 50503725 12 11486728 11486729 C CTTTT 28 GENIC homozygous 50503726 12 11482563 11482564 T A 12 GENIC homozygous 50530545 12 11483324 11483328 ATTT ---- 10 GENIC homozygous 50530547 12 11483996 11484000 TCTC ---- 7 GENIC possibly homozygous 50530549 12 11484989 11484991 GT -- 3 GENIC heterozygous 50530551 12 11486730 11486731 C CTTTTTCTT 4 GENIC homozygous 50530553 12 11487233 11487234 T TTGTGTG 7 GENIC heterozygous 50530555 12 11489298 11489302 AGAT ---- 4 GENIC heterozygous 50530559 12 11489930 11489931 G T 8 GENIC homozygous 50049774 12 11490062 11490063 C G 17 GENIC homozygous 50049776 12 11490360 11490361 A T 28 GENIC homozygous 50049778 12 11490699 11490700 T C 25 GENIC homozygous 50049780 12 11490702 11490703 C T 25 GENIC homozygous 50049782 12 11491162 11491163 C G 21 GENIC homozygous 50049784 12 11491331 11491332 T G 14 GENIC homozygous 50049786 12 11491486 11491487 C T 20 GENIC homozygous 50049788 12 11491643 11491644 G A 16 GENIC homozygous 50049790 12 11491823 11491824 G A 21 GENIC homozygous 50049792 12 11492087 11492088 A ACACACACACT 15 GENIC possibly homozygous 50530561 12 11492120 11492121 T TACAC 18 GENIC homozygous 50049798 12 11492242 11492243 A C 26 GENIC homozygous 50049800 12 11492371 11492373 AA -- 19 GENIC homozygous 50049802 12 11492474 11492475 T C 23 GENIC homozygous 50049804 12 11492593 11492594 C - 14 GENIC homozygous 50049806 12 11492596 11492597 C CA 14 GENIC homozygous 50049808 12 11492648 11492654 ACACAC ------ 2 GENIC homozygous 50530565 12 11492711 11492723 AAAACAAAAGAA ------------ 12 GENIC homozygous 50049810 12 11492755 11492756 C T 18 GENIC homozygous 50049812 12 11492842 11492843 G A 6 GENIC homozygous 50049814 12 11492912 11492913 C T 12 GENIC homozygous 50049816 12 11492973 11492974 C CTTT 7 GENIC homozygous 50049818 12 11493344 11493345 T C 6 GENIC homozygous 50049820 12 11493473 11493474 G A 12 GENIC homozygous 50049822 12 11493525 11493526 C T 12 GENIC homozygous 50049824 12 11493554 11493555 C CTTTTTTTTT 7 GENIC homozygous 50049826 12 11493594 11493595 G A 11 GENIC homozygous 50049830 12 11493598 11493599 G C 12 GENIC homozygous 50049832 12 11493931 11493932 G GTTT 25 GENIC possibly homozygous 50049834 12 11493945 11493946 C - 27 GENIC possibly homozygous 50049836 12 11494293 11494294 C T 26 GENIC homozygous 50049838 12 11494306 11494307 C T 24 GENIC homozygous 50049840 12 11494589 11494590 G A 21 GENIC homozygous 50049842 12 11494860 11494861 T G 24 GENIC homozygous 50049844 12 11495221 11495222 C T 22 GENIC homozygous 50049846 12 11495303 11495304 A G 13 GENIC homozygous 50049848 12 11495467 11495468 G A 16 GENIC homozygous 50049850 12 11495838 11495839 C G 18 GENIC homozygous 50049852 12 11495878 11495879 C T 21 GENIC homozygous 50049854 12 11495879 11495880 G T 21 GENIC homozygous 50049856 12 11495949 11495985 ATGTATGTATGTATGTATGTATGTATGTATGTATGT ------------------------------------ 10 GENIC homozygous 50503727 12 11496239 11496240 T G 11 GENIC homozygous 50049862 12 11496291 11496292 C CAA 1 GENIC homozygous 50556684 12 11496301 11496302 A AAAAAAATAT 3 GENIC heterozygous 50049866 12 11496303 11496304 T A 4 GENIC heterozygous 50556685 12 11496390 11496391 C T 9 GENIC homozygous 50049868 12 11496408 11496409 A - 8 GENIC homozygous 50049870 12 11496420 11496421 G A 9 GENIC homozygous 50049872 12 11496498 11496499 G A 14 GENIC homozygous 50049874 12 11496971 11496973 TA -- 17 GENIC homozygous 50049876 12 11497072 11497074 TT -- 9 GENIC possibly homozygous 50049880 12 11497751 11497752 G C 16 GENIC homozygous 50049886 12 11497920 11497921 G A 16 GENIC homozygous 50049888 12 11498053 11498054 G T 28 GENIC homozygous 50049890 12 11498156 11498157 G C 21 GENIC homozygous 50049892 12 11498524 11498525 G T 23 GENIC homozygous 50049894 12 11498527 11498528 G GTGTGTGT 12 GENIC homozygous 50049896 12 11498556 11498557 C G 18 GENIC homozygous 50049900 12 11498750 11498751 C T 26 GENIC homozygous 50049902 12 11498932 11498933 A T 18 GENIC homozygous 50049904 12 11498951 11498952 G A 21 GENIC homozygous 50049906 12 11499033 11499034 C T 14 GENIC homozygous 50049908 12 11499188 11499189 T C 20 GENIC homozygous 50049910 12 11499583 11499595 ATTTATTTATTC ------------ 8 GENIC possibly homozygous 50530570 12 11499680 11499681 C T 15 GENIC homozygous 50049918 12 11499768 11499769 G A 17 GENIC homozygous 50049920 12 11500693 11500694 A G 14 GENIC homozygous 50049922 12 11500727 11500796 TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTTCTTCCTCTCTCTCTCTAATAAAGATTTATTTATCTAT --------------------------------------------------------------------- 12 GENIC heterozygous 50603971 12 11500729 11500796 TCTCTCTCTCTCTCTTTCTCTCTCTCTCTTCTTCCTCTCTCTCTCTAATAAAGATTTATTTATCTAT ------------------------------------------------------------------- 12 GENIC heterozygous 50530572 12 11500834 11500835 C T 11 GENIC homozygous 50049928 12 11501075 11501076 T TATA 23 GENIC homozygous 50049930 12 11501099 11501100 A G 20 GENIC homozygous 50049932 12 11501108 11501109 A AC 21 GENIC homozygous 50049934 12 11501434 11501435 T - 12 GENIC homozygous 50049936 12 11501648 11501649 C T 22 GENIC homozygous 50049938 12 11501987 11501988 C T 20 GENIC homozygous 50049940 12 11502219 11502220 A - 19 GENIC homozygous 50049944 12 11503802 11503803 A G 20 GENIC homozygous 50049946 12 11504091 11504092 A G 27 GENIC homozygous 50049948 12 11504443 11504444 G A 18 GENIC homozygous 50049951 12 11504572 11504574 TT -- 15 GENIC homozygous 50049953 12 11505513 11505514 G A 13 GENIC homozygous 50049955 12 11508617 11508618 G C 19 GENIC homozygous 50049967 12 11505846 11505848 AA -- 8 GENIC possibly homozygous 50049957 12 11505847 11505848 A - 8 GENIC heterozygous 50049959 12 11505889 11505890 C CAAAAAA 10 GENIC possibly homozygous 50530574 12 11507011 11507012 G A 12 GENIC homozygous 50049961 12 11507073 11507074 A C 18 GENIC homozygous 50049963 12 11508047 11508048 T A 5 GENIC homozygous 50049966 12 11508695 11508696 C A 14 GENIC homozygous 50049969 12 11508707 11508708 C T 10 GENIC homozygous 50049971 12 11508722 11508723 G A 10 GENIC homozygous 50049973 12 11508850 11508851 C A 17 GENIC homozygous 50049975 12 11509322 11509323 T TTCTCTCTCTCTC 3 GENIC homozygous 50530576 12 11509602 11509605 AAA --- 6 GENIC homozygous 50049977 12 11509606 11509607 A - 6 GENIC homozygous 50049979 12 11509670 11509671 G GA 13 GENIC homozygous 50049981 12 11510010 11510011 A T 6 GENIC homozygous 50049983 12 11510207 11510210 TTT --- 4 GENIC homozygous 50049987 12 11510371 11510372 G A 1 GENIC homozygous 50049989 12 11513036 11513037 C A 14 GENIC homozygous 50049995 12 11513277 11513278 A C 23 GENIC homozygous 50049997 12 11513722 11513723 G - 11 GENIC homozygous 50050001 12 11513917 11513918 C A 23 GENIC homozygous 50050003 12 11515680 11515681 A AGT 1 GENIC homozygous 50556693 12 11515992 11515993 C A 11 GENIC homozygous 50050005 12 11516010 11516011 A AG 12 GENIC possibly homozygous 50050009 12 11516325 11516326 A G 17 GENIC homozygous 50050011 12 11516372 11516373 T C 20 GENIC homozygous 50050013 12 11517300 11517301 A G 24 GENIC homozygous 50050015 12 11517860 11517861 C A 17 GENIC homozygous 50050017 12 11518018 11518022 TGTG ---- 4 GENIC homozygous 50050019 12 11519131 11519132 T - 17 GENIC heterozygous 50050025 12 11519959 11519960 C CACAAACAA 10 GENIC homozygous 50050027 12 11520075 11520076 G A 14 GENIC homozygous 50050029 12 11520458 11520459 C CGT 6 GENIC heterozygous 50530580 12 11520458 11520459 C CGTGT 6 GENIC heterozygous 50530582 12 11520462 11520463 C T 17 GENIC homozygous 50050031 12 11520475 11520476 G GTGTGTGTGTGTGCA 12 GENIC possibly homozygous 50530584 12 11520846 11520847 G A 16 GENIC homozygous 50050033 12 11521154 11521155 G C 12 GENIC homozygous 50050035 12 11521223 11521224 T C 19 GENIC homozygous 50050037 12 11521466 11521467 A G 17 GENIC homozygous 50050039 12 11521830 11521831 T C 21 GENIC homozygous 50050041 12 11522047 11522048 T C 21 GENIC homozygous 50050043 12 11522059 11522060 T C 23 GENIC homozygous 50050045 12 11522301 11522305 CCCC ---- 10 GENIC homozygous 50050047 12 11522379 11522380 C G 18 GENIC homozygous 50050049 12 11522414 11522415 T C 20 GENIC homozygous 50050051 12 11522708 11522709 C T 14 GENIC homozygous 50050053 12 11522747 11522748 G T 12 GENIC homozygous 50050055 12 11522757 11522758 T C 13 GENIC homozygous 50050057 12 11522792 11522793 T C 11 GENIC homozygous 50050059 12 11523004 11523005 A G 16 GENIC homozygous 50050061 12 11523151 11523152 A G 19 GENIC homozygous 50050063 12 11523317 11523318 C G 31 GENIC homozygous 50050065 12 11523411 11523412 A G 21 GENIC homozygous 50050067 12 11523521 11523522 A G 24 GENIC homozygous 50050069 12 11523587 11523588 C A 29 GENIC homozygous 50050071 12 11523896 11523897 A G 12 GENIC homozygous 50050073 12 11523983 11523984 C G 21 GENIC homozygous 50050075 12 11524109 11524127 TCTTCTTCCTCCTCCTCT ------------------ 16 GENIC possibly homozygous 50530586 12 11524617 11524618 C T 16 GENIC homozygous 50050095 12 11525000 11525001 T G 12 GENIC homozygous 50050097 12 11525117 11525118 T C 9 GENIC homozygous 50050099 12 11525298 11525299 C CAA 11 GENIC homozygous 50050101 12 11525309 11525310 C CTATTATTATTA 8 GENIC homozygous 50530590 12 11525310 11525311 C T 13 GENIC homozygous 50530592 12 11525364 11525365 C - 8 GENIC homozygous 50050103 12 11525437 11525438 G A 14 GENIC homozygous 50050105 12 11525471 11525472 C T 14 GENIC homozygous 50050107 12 11525761 11525762 A C 11 GENIC homozygous 50050109 12 11525770 11525778 CCACTCTT -------- 17 GENIC homozygous 50050111 12 11526129 11526130 G A 13 GENIC homozygous 50050115 12 11527123 11527133 GACCTCTGGA ---------- 21 GENIC homozygous 50050117 12 11528425 11528426 C T 17 GENIC homozygous 50050119 12 11528731 11528732 A AG 9 GENIC heterozygous 50050121 12 11529636 11529637 G A 18 GENIC homozygous 50050123 12 11532679 11532680 T C 20 GENIC homozygous 50050125 12 11532895 11532896 T A 21 GENIC homozygous 50050127 12 11532954 11532955 C T 17 GENIC homozygous 50050129 12 11533109 11533110 T C 11 GENIC homozygous 50050131 12 11533652 11533653 C CTTT 7 GENIC homozygous 50530594 12 11533680 11533681 T - 5 GENIC heterozygous 50278514 12 11535507 11535508 A C 11 GENIC homozygous 50530596 12 11535520 11535521 A C 12 GENIC homozygous 50503728 12 11535524 11535527 AAC --- 12 GENIC homozygous 50050135 12 11535577 11535578 C CGAAAGAAAGAAAGAAA 9 GENIC homozygous 50050139 12 11535826 11535827 A T 8 GENIC homozygous 50050143 12 11538195 11538196 G GTGTATGTATGTA 9 GENIC homozygous 50568005 12 11538372 11538373 T TGTATGTAC 15 GENIC possibly homozygous 50530602 12 11538458 11538462 TATG ---- 22 GENIC possibly homozygous 50530604 12 11538485 11538493 GTATGTAT -------- 21 GENIC possibly homozygous 50530606 12 11538739 11538743 TATG ---- 25 GENIC homozygous 50050161 12 11538774 11538775 G A 25 GENIC homozygous 50050163 12 11539566 11539567 C T 10 GENIC homozygous 50050165 12 11539896 11539897 T C 20 GENIC homozygous 50050167 12 11539998 11539999 A G 14 GENIC homozygous 50050169 12 11540469 11540479 GTCAATTAGG ---------- 13 GENIC homozygous 50050171 12 11540604 11540606 AC -- 4 GENIC homozygous 50050173 12 11540660 11540661 T C 3 GENIC homozygous 50050175 12 11542846 11542847 T G 19 GENIC homozygous 50050195 12 11542968 11542969 A G 14 GENIC homozygous 50050197 12 11543064 11543065 G A 19 GENIC homozygous 50050199 12 11543124 11543125 A G 14 GENIC possibly homozygous 50050201 12 11543634 11543635 C T 19 GENIC homozygous 50050205 12 11543698 11543724 ACACATACACATACACATACACATAC -------------------------- 10 GENIC heterozygous 50050207 12 11543700 11543728 ACATACACATACACATACACATACACAT ---------------------------- 13 GENIC heterozygous 50530608 12 11543729 11543730 C G 8 GENIC homozygous 50278559 12 11543731 11543732 C G 6 GENIC homozygous 50278560 12 11543733 11543734 T G 6 GENIC homozygous 50278561 12 11543735 11543736 C G 15 GENIC homozygous 50278562 12 11543790 11543791 A G 19 GENIC possibly homozygous 50050209 12 11544361 11544362 T C 14 GENIC homozygous 50050211 12 11545796 11545797 C T 24 GENIC homozygous 50050213 12 11546370 11546371 C T 13 GENIC homozygous 50050215 12 11546435 11546436 T C 17 GENIC homozygous 50050217 12 11546565 11546566 G GGGAGGA 13 GENIC homozygous 50050221 12 11547147 11547148 A G 16 GENIC homozygous 50050223 12 11547276 11547277 C T 9 GENIC homozygous 50050225 12 11547752 11547756 TAGA ---- 11 GENIC homozygous 50050227 12 11548158 11548159 G GAAAAAAA 7 GENIC heterozygous 50530610 12 11548453 11548454 A G 7 GENIC homozygous 50050233 12 11548687 11548688 T C 12 GENIC homozygous 50050245 12 11548546 11548547 A G 15 GENIC homozygous 50050235 12 11548559 11548560 A T 15 GENIC homozygous 50050237 12 11548568 11548569 C T 14 GENIC homozygous 50050239 12 11548670 11548671 C T 12 GENIC homozygous 50050241 12 11548683 11548684 G A 13 GENIC homozygous 50050243 12 11548846 11548847 C T 15 GENIC homozygous 50050247 12 11549155 11549156 G A 17 GENIC homozygous 50050249 12 11549686 11549687 G A 24 GENIC homozygous 50050251 12 11550268 11550269 A AGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG 8 GENIC homozygous 50503729 12 11550478 11550479 C T 11 GENIC homozygous 50050261 12 11550489 11550490 C T 7 GENIC homozygous 50050263 12 11550527 11550528 G A 11 GENIC homozygous 50050265 12 11550529 11550530 T C 11 GENIC homozygous 50050267 12 11550974 11550987 TTCTTTTCTTTTC ------------- 6 GENIC heterozygous 50050269 12 11550975 11550987 TCTTTTCTTTTC ------------ 6 GENIC heterozygous 50600358 12 11551151 11551152 A G 14 GENIC homozygous 50050271 12 11551201 11551207 CCCATT ------ 21 GENIC homozygous 50050273 12 11551606 11551607 A G 16 GENIC homozygous 50050275 12 11551661 11551662 T C 13 GENIC homozygous 50050277 12 11551773 11551774 T C 22 GENIC homozygous 50050279 12 11551822 11551823 A G 26 GENIC homozygous 50050281 12 11552509 11552510 G A 18 GENIC homozygous 50050283 12 11552639 11552640 A - 30 GENIC homozygous 50050285