chr start stop reference nuc variant nuc depth genic status zygosity variant ID 10 39497686 39497687 C G 5 GENIC homozygous 51423668 10 39497935 39497936 A G 6 GENIC homozygous 51423670 10 39498143 39498144 G C 9 GENIC homozygous 51423671 10 39498191 39498192 C CCT 6 GENIC homozygous 52305471 10 39498545 39498546 T G 16 GENIC homozygous 51423672 10 39499344 39499345 G - 26 GENIC homozygous 52305474 10 39500157 39500158 C CCCTT 19 GENIC homozygous 52305476 10 39500196 39500204 TTCCTTCC -------- 18 GENIC homozygous 52305478 10 39501945 39501946 A G 14 GENIC homozygous 52305482 10 39502339 39502340 A AT 28 GENIC possibly homozygous 52305484 10 39502447 39502448 C T 19 GENIC homozygous 51423677 10 39503167 39503168 A T 22 GENIC homozygous 51423678 10 39504050 39504051 T - 22 GENIC homozygous 51423679 10 39504079 39504080 A G 19 GENIC homozygous 51423680 10 39504171 39504172 T A 27 GENIC homozygous 51423681 10 39504439 39504440 G - 14 GENIC heterozygous 51423682 10 39504957 39504958 G T 23 GENIC homozygous 51423683 10 39505256 39505257 A G 26 GENIC homozygous 51423684 10 39505394 39505395 T C 25 GENIC homozygous 51423685 10 39507019 39507022 TTG --- 14 GENIC homozygous 51423687 10 39507419 39507421 GG -- 1 GENIC homozygous 51423690 10 39507422 39507446 TTTTTTTTTGTTTTTTTTTTTTTG ------------------------ 3 GENIC homozygous 52647634 10 39505776 39505781 GGGGG ----- 23 GENIC homozygous 52369725 10 39505780 39505781 G GATTTC 22 GENIC homozygous 52369727 10 39507483 39507484 G - 16 GENIC homozygous 51423693 10 39507692 39507693 C CT 18 GENIC homozygous 51423694 10 39507960 39507961 C T 14 GENIC homozygous 51423695 10 39507978 39507979 C CTCAA 16 GENIC homozygous 51423696 10 39508023 39508024 A G 29 GENIC homozygous 51423697 10 39508312 39508313 A G 23 GENIC homozygous 51423698 10 39508509 39508510 T C 39 GENIC homozygous 51423699 10 39508861 39508862 T C 3 GENIC homozygous 51423700 10 39508955 39508956 C T 23 GENIC homozygous 51423701 10 39509034 39509035 C T 26 GENIC homozygous 51423702 10 39509047 39509048 T C 26 GENIC homozygous 51423703 10 39509264 39509265 G T 22 GENIC possibly homozygous 52305486 10 39509632 39509633 T TG 4 GENIC homozygous 52647637 10 39509641 39509644 AAA --- 4 GENIC homozygous 52647641 10 39509651 39509654 ACA --- 4 GENIC homozygous 52647644 10 39509660 39509661 T TTCG 4 GENIC homozygous 52647647 10 39509663 39509664 G GC 4 GENIC homozygous 52647650 10 39509670 39509675 TATAT ----- 4 GENIC homozygous 52647653 10 39509677 39509678 A AC 4 GENIC homozygous 52647656 10 39509680 39509681 A AACC 4 GENIC homozygous 52647659 10 39509684 39509685 G GGC 4 GENIC homozygous 52647662 10 39509689 39509690 C CGCTTG 4 GENIC homozygous 52647665 10 39509694 39509695 T - 4 GENIC homozygous 52647669 10 39509696 39509698 CC -- 4 GENIC homozygous 52647672 10 39509725 39509726 T - 1 GENIC homozygous 52369733 10 39509730 39509732 GG -- 1 GENIC homozygous 52369735 10 39509736 39509739 AGA --- 2 GENIC homozygous 52369737 10 39509742 39509748 ACAGAC ------ 5 GENIC heterozygous 52369739 10 39509748 39509749 A ATGTT 5 GENIC heterozygous 52369741 10 39509767 39509769 GC -- 8 GENIC heterozygous 52369743 10 39509771 39509772 C - 8 GENIC heterozygous 52369745 10 39509773 39509774 A ATGT 8 GENIC heterozygous 52369747 10 39509874 39509875 T G 13 GENIC homozygous 51423708 10 39510855 39510856 T G 23 GENIC homozygous 51423709 10 39511096 39511097 C A 21 GENIC homozygous 51423710 10 39511432 39511442 ACATGCACAC ---------- 22 GENIC homozygous 51423711 10 39511594 39511595 T A 28 GENIC homozygous 51423713 10 39511775 39511776 G C 11 GENIC homozygous 52305488 10 39512050 39512051 A G 12 GENIC homozygous 51423717 10 39512117 39512118 C T 13 GENIC homozygous 52044170 10 39512169 39512170 C CAA 19 GENIC homozygous 51423718 10 39512179 39512180 C T 25 GENIC homozygous 51423719 10 39512248 39512249 G T 18 GENIC homozygous 51423720 10 39512386 39512387 T C 16 GENIC homozygous 51423721 10 39512478 39512479 C CA 18 GENIC homozygous 51423722 10 39512522 39512523 C A 25 GENIC homozygous 51423723 10 39512751 39512752 A G 9 GENIC homozygous 51423724 10 39513110 39513111 A G 18 GENIC homozygous 51634737 10 39513111 39513112 G A 18 GENIC homozygous 51634738 10 39513694 39513695 T C 9 GENIC homozygous 51423728 10 39514065 39514066 A G 18 GENIC homozygous 51423729 10 39514239 39514240 A G 12 GENIC homozygous 51423730 10 39514252 39514253 T TGCGC 2 GENIC homozygous 52369749 10 39514256 39514257 C CGTGCGTGCGTGCGTGT 2 GENIC homozygous 52369751 10 39514280 39514281 C CGTGTGTGTGTGT 3 GENIC homozygous 52369755 10 39515427 39515428 T G 29 GENIC homozygous 51423738 10 39515445 39515448 AAA --- 22 GENIC heterozygous 52044174 10 39515446 39515448 AA -- 22 GENIC heterozygous 51423739 10 39515772 39515773 C T 26 GENIC homozygous 51423740 10 39515784 39515785 C T 27 GENIC homozygous 51423741 10 39515878 39515879 G A 30 GENIC homozygous 51423742 10 39516261 39516262 A ATT 11 GENIC heterozygous 51423744 10 39516261 39516262 A ATTT 11 GENIC heterozygous 51857258 10 39516261 39516262 A ATTTT 11 GENIC heterozygous 51857261 10 39516278 39516279 T C 18 GENIC homozygous 51423745 10 39517554 39517555 A T 8 GENIC homozygous 51423749 10 39516842 39516843 G A 18 GENIC homozygous 51423746 10 39517043 39517044 C T 32 GENIC homozygous 51423747 10 39517104 39517105 G A 29 GENIC homozygous 51423748 10 39517670 39517671 C T 12 GENIC homozygous 51423750 10 39517806 39517807 G GTTTTTTTTTTTTTTTTT 13 GENIC homozygous 52369757 10 39517952 39517953 C T 20 GENIC homozygous 51423752 10 39518257 39518258 C T 28 GENIC homozygous 51423753 10 39518446 39518447 C CATG 25 GENIC homozygous 51423754 10 39518596 39518597 C A 32 GENIC homozygous 52305490 10 39518600 39518601 T C 33 GENIC homozygous 51423755 10 39518659 39518660 T C 16 GENIC homozygous 51423756 10 39518854 39518855 T C 11 GENIC homozygous 51423757 10 39518903 39518904 C CAAAA 1 GENIC homozygous 52369759 10 39518999 39519000 G A 8 GENIC homozygous 51423758 10 39519249 39519250 T TTA 10 GENIC homozygous 51423760 10 39519262 39519263 G T 11 GENIC homozygous 51423762 10 39519268 39519269 G GGTT 8 GENIC heterozygous 51423764 10 39519268 39519269 G GGTTT 8 GENIC possibly homozygous 51634739 10 39519342 39519343 T TC 12 GENIC homozygous 51423765 10 39519377 39519378 C T 15 GENIC homozygous 51423766 10 39519414 39519415 C T 15 GENIC homozygous 51423767 10 39519996 39519997 T TGG 8 GENIC homozygous 51423769 10 39520366 39520367 G A 12 GENIC homozygous 52044178 10 39520869 39520870 T C 10 GENIC homozygous 51857280 10 39521047 39521048 T C 22 GENIC homozygous 51423774 10 39521087 39521088 C T 23 GENIC homozygous 51423775 10 39521317 39521318 A G 21 GENIC homozygous 51423777 10 39521456 39521457 G A 33 GENIC homozygous 51423778 10 39521473 39521474 G A 37 GENIC homozygous 51423779 10 39521477 39521478 A AT 37 GENIC homozygous 51423780 10 39521933 39521934 T TTC 13 GENIC homozygous 52305498 10 39520908 39520909 T C 11 GENIC homozygous 52305492 10 39521892 39521893 A C 12 GENIC homozygous 52305494 10 39521906 39521909 TTT --- 8 GENIC homozygous 52305496 10 39522810 39522811 C A 25 GENIC homozygous 51423784 10 39522846 39522847 T C 23 GENIC homozygous 51423785 10 39523236 39523237 A G 25 GENIC homozygous 51423787 10 39523717 39523718 T - 13 GENIC homozygous 51423788 10 39523719 39523720 A G 13 GENIC homozygous 52369761 10 39524457 39524458 C T 20 GENIC possibly homozygous 51423791 10 39524607 39524608 C T 23 GENIC homozygous 51423792 10 39524761 39524762 A G 33 GENIC homozygous 51423793 10 39525323 39525324 T G 13 GENIC homozygous 51423794 10 39525358 39525359 T C 20 GENIC homozygous 51423795 10 39525531 39525532 G A 19 GENIC homozygous 51423796 10 39526418 39526419 A G 24 GENIC homozygous 51423797 10 39526829 39526830 C T 28 GENIC homozygous 51423799 10 39527805 39527806 G A 23 GENIC homozygous 51423800 10 39527993 39527994 T A 15 GENIC homozygous 51423801 10 39528203 39528204 T G 22 GENIC homozygous 51423802 10 39528463 39528464 A G 22 GENIC homozygous 51423803 10 39528938 39528939 A AAT 25 GENIC homozygous 52305500 10 39529262 39529269 CCCCTGC ------- 20 GENIC homozygous 51423804 10 39530003 39530004 C T 20 GENIC homozygous 51423807 10 39530059 39530060 T C 17 GENIC homozygous 51423808 10 39530226 39530227 T C 13 GENIC homozygous 51423810 10 39530368 39530369 G A 21 GENIC homozygous 51423811 10 39530555 39530556 T C 13 GENIC homozygous 51423813 10 39530728 39530729 C T 31 GENIC homozygous 51423814 10 39531209 39531210 A - 18 GENIC homozygous 51423815 10 39531769 39531770 A AAT 22 GENIC homozygous 51423816 10 39531986 39531987 A G 20 GENIC homozygous 51423817 10 39532212 39532213 C G 36 GENIC homozygous 51857292 10 39532284 39532285 G A 19 GENIC homozygous 52305502 10 39532410 39532411 T C 17 GENIC homozygous 51423818 10 39532691 39532692 C A 30 GENIC homozygous 52143223 10 39532693 39532694 C G 31 GENIC homozygous 52143225 10 39532733 39532734 A G 23 GENIC homozygous 51857301 10 39532828 39532829 A - 27 GENIC homozygous 51423819 10 39533199 39533200 T TACAC 10 GENIC possibly homozygous 51423821 10 39534599 39534600 C CACACACACACAT 7 GENIC heterozygous 52369763 10 39534650 39534651 C G 14 GENIC homozygous 51857313 10 39534671 39534672 C T 13 GENIC homozygous 51857316 10 39534799 39534800 T C 28 GENIC homozygous 51857319 10 39534830 39534836 GTGTGA ------ 18 GENIC homozygous 51857322 10 39534912 39534914 GT -- 11 GENIC homozygous 51857328 10 39534982 39535037 GTGTGTGGGTGAGTGTGTGAGTGTGAGAGTGTGTGTGAGTGTGAGAGTGTGTGTG ------------------------------------------------------- 5 GENIC homozygous 52369765 10 39535137 39535138 T TGTGA 25 GENIC homozygous 51857349 10 39535568 39535569 T C 22 GENIC homozygous 51857352 10 39535733 39535734 G A 31 GENIC homozygous 51857355 10 39535740 39535741 A G 33 GENIC homozygous 51857358 10 39535790 39535791 T C 39 GENIC homozygous 51857361 10 39535837 39535838 G T 39 GENIC homozygous 51857364 10 39535855 39535856 G T 32 GENIC homozygous 51857367 10 39535873 39535874 G A 30 GENIC homozygous 51857370 10 39535939 39535940 T C 24 GENIC homozygous 51857373 10 39536096 39536098 TT -- 18 GENIC homozygous 51857377 10 39536143 39536144 C T 24 GENIC homozygous 51857380 10 39536216 39536232 AAAGAAAGAAAGGAAC ---------------- 14 GENIC homozygous 52369767 10 39536481 39536482 G - 32 GENIC homozygous 51857389 10 39536704 39536705 G A 17 GENIC homozygous 51857392 10 39536744 39536745 A G 28 GENIC homozygous 51857395 10 39536757 39536758 G A 29 GENIC homozygous 51857398 10 39536769 39536776 AAGCGAC ------- 29 GENIC homozygous 51857401 10 39536812 39536814 CC -- 23 GENIC homozygous 51857404 10 39537062 39537063 A G 16 GENIC homozygous 51857407 10 39537119 39537120 G C 14 GENIC homozygous 51857410 10 39537145 39537146 G T 19 GENIC homozygous 51857413 10 39538016 39538017 C T 17 GENIC homozygous 51857416 10 39538094 39538095 G C 16 GENIC homozygous 51857419 10 39538434 39538435 A G 20 GENIC homozygous 51857422 10 39538684 39538685 C T 23 GENIC homozygous 51857425 10 39539648 39539649 A AACACAC 13 GENIC homozygous 52369769 10 39539923 39539924 A T 22 GENIC homozygous 51857428 10 39540285 39540286 C T 24 GENIC homozygous 51857431 10 39540432 39540433 A G 27 GENIC homozygous 51857434 10 39541068 39541069 A T 19 GENIC homozygous 51857437 10 39541236 39541237 A G 17 GENIC homozygous 51857440 10 39541275 39541276 C T 23 GENIC homozygous 51857443 10 39541671 39541672 G T 12 GENIC homozygous 51857446 10 39542180 39542181 T - 14 GENIC homozygous 51857449 10 39543125 39543126 T C 17 GENIC homozygous 51857452 10 39547328 39547329 C A 30 GENIC homozygous 51857455