chr start stop reference nuc variant nuc depth genic status zygosity variant ID 1 52362088 52362088 AATAAGTAATTTCCTTAATGTTCGTGTGTACTGTATTTACATACTAAAATGGACTTAAGGT 21 GENIC homozygous 127382193 1 52394438 52394439 A T 18 GENIC homozygous 108097291 1 52401914 52401915 C 23 GENIC homozygous 127382195 1 52401920 52401921 G 25 GENIC homozygous 127382196 1 52401928 52401930 GG 25 GENIC homozygous 127382197 1 52401936 52401937 T G 23 GENIC homozygous 120480051 1 52401937 52401938 G T 23 GENIC homozygous 120480052 1 52401942 52401944 TG 23 GENIC homozygous 127382198 1 52401947 52401947 T 21 GENIC homozygous 127382199 1 52401956 52401956 T 20 GENIC homozygous 127382200 1 52402008 52402009 G 11 GENIC homozygous 127382201 1 52402050 52402050 T 2 GENIC homozygous 127382202 1 52402065 52402067 CT 2 GENIC homozygous 127382203 1 52403269 52403271 CG 20 GENIC homozygous 127382206 1 52403281 52403282 T C 20 GENIC homozygous 108097294 1 52403282 52403283 G T 20 GENIC homozygous 108097295 1 52403294 52403295 C 12 GENIC homozygous 127382207 1 52403299 52403311 TTAAATGAGCAG 13 GENIC homozygous 127382208 1 52403315 52403316 G 13 GENIC homozygous 127382209 1 52403383 52403385 GC 15 GENIC homozygous 127382215 1 52402012 52402013 T G 12 GENIC homozygous 120471555 1 52403322 52403323 A 13 GENIC homozygous 127382210 1 52403334 52403334 A 15 GENIC homozygous 127382211 1 52403351 52403354 CTG 16 GENIC homozygous 127382212 1 52403363 52403364 G 15 GENIC homozygous 127382213 1 52403370 52403370 A 15 GENIC homozygous 127382214 1 52403356 52403357 G T 16 GENIC homozygous 108721887 1 52403480 52403481 C 12 GENIC homozygous 127382216 1 52406041 52406042 T 13 GENIC homozygous 127382217 1 52406058 52406059 C 14 GENIC homozygous 127382218 1 52406067 52406068 T 15 GENIC homozygous 127382219 1 52406068 52406069 C A 15 GENIC homozygous 120513767 1 52406081 52406082 G 14 GENIC homozygous 127382220 1 52406099 52406099 AC 14 GENIC homozygous 127382221 1 52406108 52406111 GAA 14 GENIC homozygous 127382222 1 52406126 52406127 C G 13 GENIC homozygous 108097296 1 52406139 52406139 T 13 GENIC homozygous 127382223 1 52406150 52406154 AGGG 11 GENIC homozygous 127382224 1 52406156 52406157 G T 11 GENIC homozygous 120471556 1 52406167 52406168 A 10 GENIC homozygous 127382225 1 52406174 52406174 C 10 GENIC homozygous 127382226 1 52406179 52406180 A 9 GENIC homozygous 127382227 1 52406199 52406199 GA 6 GENIC homozygous 127382228 1 52406254 52406255 A 3 GENIC homozygous 127382231 1 52406201 52406203 CT 5 GENIC homozygous 127382229 1 52406207 52406208 T 4 GENIC homozygous 127382230 1 52406240 52406240 T 2 GENIC homozygous 129839246 1 52406265 52406266 C 3 GENIC homozygous 127382232 1 52406270 52406271 A 3 GENIC homozygous 127382233 1 52406274 52406275 A 3 GENIC homozygous 127382234 1 52406282 52406283 T 4 GENIC homozygous 127382235 1 52406289 52406290 C 8 GENIC homozygous 127382236 1 52406293 52406293 T 8 GENIC homozygous 127382237 1 52406317 52406317 A 8 GENIC homozygous 127382238 1 52406329 52406330 G 8 GENIC homozygous 127382239 1 52406335 52406335 C 8 GENIC homozygous 127382240 1 52406344 52406345 C 8 GENIC homozygous 127382241 1 52406377 52406377 A 8 GENIC homozygous 127382242 1 52406383 52406384 A 8 GENIC homozygous 127382243 1 52406392 52406392 A 6 GENIC homozygous 127382244 1 52406403 52406404 A 6 GENIC homozygous 127382245 1 52406411 52406413 TT 5 GENIC homozygous 127382246 1 52406878 52406879 G 2 GENIC homozygous 130618827 1 52406892 52406897 AAACC 2 GENIC homozygous 130618828 1 52406901 52406904 ATA 2 GENIC homozygous 130618829 1 52406918 52406919 G A 2 GENIC homozygous 120847278 1 52406924 52406924 G 2 GENIC homozygous 130618830 1 52406947 52406947 T 2 GENIC homozygous 130618831 1 52406973 52406974 T C 16 GENIC homozygous 108097297 1 52406977 52406979 GC 16 GENIC homozygous 127382247 1 52406994 52406995 G C 13 GENIC homozygous 108097298 1 52406997 52406998 A 13 GENIC homozygous 127382248 1 52407009 52407012 CAA 12 GENIC homozygous 127382249 1 52407015 52407017 AG 12 GENIC homozygous 127382250 1 52407029 52407032 CCA 11 GENIC homozygous 127382251 1 52407035 52407038 ATA 10 GENIC homozygous 127382252 1 52407041 52407042 A T 9 GENIC homozygous 120847279 1 52407054 52407054 A 7 GENIC homozygous 127382253 1 52407080 52407080 A 6 GENIC homozygous 127382254 1 52407093 52407093 T 5 GENIC homozygous 127382255 1 52407110 52407110 A 3 GENIC homozygous 127382256 1 52407121 52407122 G 3 GENIC homozygous 127382257 1 52407133 52407133 A 2 GENIC homozygous 127382258 1 52407157 52407158 C G 6 GENIC homozygous 108721888 1 52407158 52407159 G C 6 GENIC homozygous 120513768 1 52407172 52407172 C 8 GENIC homozygous 127382259 1 52407208 52407209 C A 9 GENIC homozygous 108721889 1 52407209 52407210 A T 9 GENIC homozygous 108721890 1 52407218 52407219 C T 10 GENIC homozygous 108097299 1 52407225 52407226 G 10 GENIC homozygous 127382260 1 52407243 52407244 G T 11 GENIC homozygous 120513770 1 52407245 52407246 A G 11 GENIC homozygous 108721891 1 52407254 52407255 G 10 GENIC homozygous 127382261 1 52407283 52407285 TT 13 GENIC homozygous 127382262 1 52407298 52407298 G 10 GENIC homozygous 127382263 1 52407319 52407319 A 8 GENIC homozygous 127382264 1 52407325 52407326 G 8 GENIC homozygous 127382265 1 52407330 52407331 A 9 GENIC homozygous 127382266 1 52407334 52407334 G 9 GENIC homozygous 127382267 1 52407345 52407346 A T 9 GENIC homozygous 108097300 1 52407348 52407349 T 9 GENIC homozygous 127382268 1 52407354 52407354 G 9 GENIC homozygous 127382269 1 52409369 52409370 G 26 GENIC homozygous 127382270 1 52409436 52409437 C T 24 GENIC homozygous 120471557 1 52409437 52409438 T G 24 GENIC homozygous 120471558 1 52423588 52423588 G 8 GENIC homozygous 127382271 1 52440921 52440922 G 28 GENIC homozygous 127382272 1 52440960 52440961 A 24 GENIC homozygous 127382273 1 52441002 52441002 T 24 GENIC homozygous 127382274 1 52441014 52441014 G 24 GENIC homozygous 127382275 1 52441024 52441024 GG 23 GENIC homozygous 127382276 1 52441067 52441068 T 11 GENIC homozygous 127382277 1 52441089 52441089 G 11 GENIC homozygous 127382278 1 52441090 52441090 G 12 GENIC homozygous 127382279 1 52441107 52441107 GG 13 GENIC homozygous 127382280 1 52441117 52441118 T 11 GENIC homozygous 127382281 1 52441122 52441122 G 11 GENIC homozygous 127382282 1 52441133 52441133 GG 10 GENIC homozygous 127382283 1 52441137 52441137 AG 10 GENIC homozygous 127382284 1 52441161 52441161 G 9 GENIC homozygous 127382285 1 52455148 52455151 AAC 5 GENIC homozygous 134357183 1 52457695 52457695 C 24 GENIC homozygous 127382287 1 52458109 52458110 T C 15 GENIC homozygous 108097302 1 52458161 52458162 G C 16 GENIC homozygous 108097303 1 52459525 52459526 T G 10 GENIC homozygous 108721893 1 52459529 52459530 G 10 GENIC homozygous 127382288 1 52459548 52459550 TA 12 GENIC homozygous 127382289 1 52459556 52459556 T 12 GENIC homozygous 127382290 1 52459678 52459679 C A 20 GENIC homozygous 108097304 1 52459679 52459680 T A 20 GENIC homozygous 108097305 1 52459680 52459681 T G 20 GENIC homozygous 108097306 1 52460480 52460481 G 21 GENIC homozygous 127382291 1 52460482 52460483 T G 21 GENIC homozygous 120471559 1 52460486 52460487 C G 22 GENIC homozygous 120471560 1 52460486 52460486 T 22 GENIC homozygous 127382292 1 52469187 52469187 A 12 GENIC homozygous 127382293 1 52469192 52469192 T 11 GENIC homozygous 127382294 1 52406917 52406918 A G 2 GENIC homozygous 120558701 1 52476293 52476294 T 14 GENIC homozygous 127382295 1 52476300 52476301 T 15 GENIC homozygous 127382296 1 52476308 52476309 C 13 GENIC homozygous 127382297 1 52476313 52476314 C 13 GENIC homozygous 127382298 1 52476329 52476329 G 13 GENIC homozygous 127382299 1 52476337 52476338 A 13 GENIC homozygous 127382300 1 52476344 52476345 T 13 GENIC homozygous 127382301 1 52407026 52407027 T C 11 GENIC homozygous 120845317 1 52407113 52407114 A G 3 GENIC homozygous 120666385 1 52497355 52497359 GTTC 12 GENIC homozygous 127382314 1 52497371 52497379 AGGCGGGG 9 GENIC homozygous 127382315 1 52497393 52497393 CC 9 GENIC homozygous 127382316 1 52497397 52497397 C 8 GENIC homozygous 127382317 1 52497414 52497414 C 7 GENIC homozygous 127382318 1 52497434 52497434 T 7 GENIC homozygous 127382319 1 52497469 52497470 G 6 GENIC homozygous 127382320 1 52497481 52497485 ACTG 6 GENIC homozygous 127382321 1 52497490 52497490 T 6 GENIC homozygous 127382322 1 52497543 52497544 A 6 GENIC homozygous 127382323 1 52497554 52497554 A 7 GENIC homozygous 127382324 1 52497557 52497558 G 7 GENIC homozygous 127382325 1 52497587 52497588 G 9 GENIC homozygous 127382326 1 52497590 52497591 G 9 GENIC homozygous 127382327 1 52497598 52497599 T 9 GENIC homozygous 127382328 1 52497603 52497606 AAC 12 GENIC homozygous 127382329 1 52497619 52497619 C 13 GENIC homozygous 127382330 1 52497621 52497621 T 14 GENIC homozygous 127382331 1 52497633 52497634 G 17 GENIC homozygous 127382332 1 52497637 52497638 C T 18 GENIC homozygous 108097310 1 52497647 52497647 T 18 GENIC homozygous 127382333 1 52497683 52497684 T A 15 GENIC homozygous 108721894 1 52497685 52497687 TA 15 GENIC homozygous 127382334 1 52497698 52497699 G A 15 GENIC homozygous 108097311 1 52497701 52497702 G A 15 GENIC homozygous 108097312 1 52497717 52497720 ACG 13 GENIC homozygous 127382335 1 52497725 52497726 G T 15 GENIC homozygous 108097313 1 52497735 52497736 T C 19 GENIC homozygous 108097314 1 52497737 52497740 GGT 19 GENIC homozygous 127382336 1 52497747 52497748 G T 18 GENIC homozygous 108097315 1 52497757 52497758 T 21 GENIC homozygous 127382337 1 52497761 52497761 C 18 GENIC homozygous 127382338 1 52502625 52502626 G A 19 GENIC homozygous 120502696 1 52506360 52506361 A 2 GENIC homozygous 127382339 1 52506368 52506369 C 3 GENIC homozygous 127382340 1 52507501 52507502 C 8 GENIC homozygous 127382341 1 52509745 52509745 TTCCTTG 24 GENIC homozygous 127382342 1 52536541 52536541 A 17 GENIC possibly homozygous 127382343 1 52497448 52497449 A C 5 GENIC homozygous 127533409 1 52497449 52497450 C A 5 GENIC homozygous 127533410 1 52497645 52497646 T A 18 GENIC heterozygous 134358387