Protein Vhl

URN urn:agi-llid:5952
Connectivity 234
Name Vhl
Description von Hippel-Lindau tumor suppressor
Notes Von Hippel-Lindau syndrome (VHL) is a dominantly inherited familial cancer syndrome predisposing to a variety of malignant and benign tumors. A germline mutation of this gene is the basis of familial inheritance of VHL syndrome. The protein encoded by this gene is a component of the protein complex that includes elongin B, elongin C, and cullin-2, and possesses ubiquitin ligase E3 activity. This protein is involved in the ubiquitination and degradation of hypoxia-inducible-factor (HIF), which is a transcription factor that plays a central role in the regulation of gene expression by oxygen. RNA polymerase II subunit POLR2G/RPB7 is also reported to be a target of this protein. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq]

Pathway hypoxia inducible factor pathway
altered hypoxia inducible factor pathway
renal cell cancer pathway

GO Molecular Function transcription factor binding
ubiquitin-protein ligase activity

GO Cellular Component membrane
cytoplasm
cytosol
endoplasmic reticulum
mitochondrion
VCB complex
transcription factor complex
nucleus

GO Biological Process negative regulation of cell proliferation
response to stress
positive regulation of cell differentiation
angiogenesis
cell morphogenesis
neuron differentiation
extracellular matrix organization
regulation of catecholamine metabolic process
regulation of transcription
negative regulation of transcription from RNA polymerase II promoter
positive regulation of transcription
regulation of transcription, DNA-dependent
anti-apoptosis
blood vessel endothelial cell migration
protein ubiquitination
modification-dependent protein catabolic process
response to hypoxia
response to ethanol
protein stabilization
protein heterooligomerization
protein catabolic process
proteolysis

Ariadne Ontology Ubiquitin-dependent protein degradation
Tumor suppressors

Group Ubiquitin-dependent protein degradation
Tumor suppressors
negative regulation of cell proliferation
response to stress
positive regulation of cell differentiation
angiogenesis
cell morphogenesis
neuron differentiation
extracellular matrix organization
regulation of catecholamine metabolic process
regulation of transcription
negative regulation of transcription from RNA polymerase II promoter
positive regulation of transcription
regulation of transcription, DNA-dependent
anti-apoptosis
blood vessel endothelial cell migration
protein ubiquitination
modification-dependent protein catabolic process
response to hypoxia
response to ethanol
protein stabilization
protein heterooligomerization
protein catabolic process
proteolysis
transcription factor binding
ubiquitin-protein ligase activity
membrane
cytoplasm
cytosol
endoplasmic reticulum
mitochondrion
VCB complex
transcription factor complex
nucleus

MedScan ID 5952

Hugo ID 12687

Human chromosome position 3p26-p25

LocusLink ID 5952
7428
22346
24874

Alias RCA1
VHL1
HRCA1
von Hippel-Lindau disease tumor suppressor
pVHL
protein G7
elongin binding protein
Vhlh
OTTMUSP00000028703
von Hippel-Lindau syndrome homolog
von Hippel-Lindau syndrome protein homolog
elongin-binding protein
G7 PROTEIN
HRCA I
RCA I
renal carcinoma, familial, associated 1
VHL gene
VHL protein
Von Hippel-Lindau disease tumour suppressor
von Hippel-Lindau syndrome gene
von Hippel-Lindau syndrome protein
von Hippel-Lindau tumor suppressor
von Hippel-Lindau tumour suppressor

Organism Homo sapiens
Mus musculus
Rattus norvegicus

GenBank ID NC_000003
NM_000551
NP_000542
NM_198156
NP_937799
NT_022517
NW_001838876
NW_921651
NG_008212
AC_000135
AC_000046
AC034193
AF010238
AAB64200
CH471055
EAW64064
EAW64065
EAW64066
EAW64067
EAW64068
U54612
AAA98614
X96489
CAA65343
AA361862
AF088066
AK304002
BAG64919
AK309560
AK315799
BAG38142
AW022843
BC058831
AAH58831
BG284971
BG288777
BG914051
BM564781
BX100230
L15409
P40337
NC_000072
NM_009507
NP_033533
NT_039353
NW_001030811
AC_000028
AC153987
AF513984
AAM53645
CH466523
EDK99490
EDK99491
AK159238
BAE34921
AK161408
BAE36378
AK171264
BAE42352
AK171604
BAE42557
BC052417
AAH52417
S76748
AAB33363
U12570
AAA20662
P40338
Q3TTE7
NC_005103
NM_052801
NP_434688
NW_001084830
NW_047696
AC_000072
CH473957
EDL91551
EDL91552
S80345
AAB35675
U14746
AAA86874
Q64259

OMIM ID 608537
171300
263400
144700
193300

Mouse chromosome position 6 49.45 cM

GO ID 0008134
0001525
0006916
0043534
0000902
0030198
0008285
0000122
0045597
0045941
0030163
0051291
0050821
0016567
0006508
0042069
0045449
0006355
0001666
0006950
0030891
0005737
0005829
0005783
0016020
0005739
0005634
0030182
0004842
0045471
0005667
0019941

Rat chromosome position 4q41.3-q42.1

Swiss-Prot Accession P40337
P40338
Q3TTE7
Q64259
Q64197
Q80WY8
B2RE45
Q13599
Q6PDA9

PIR ID T10752
I38926

Unigene ID Hs.517792
Mm.29407
Rn.11059

KEGG ID hsa:7428
mmu:22346
rno:24874

Swiss-Prot ID VHL_RAT
VHL_MOUSE
VHL_HUMAN
Q3TTE7_MOUSE

Cell Localization Cytoplasm
Membrane
Nucleus

IPI ID IPI00210924
IPI00109233
IPI00027969
IPI00221186
IPI00336024
IPI00792496

Homologene ID 465

RGD ID 3960

MGI ID 103223