| URN | urn:agi-llid:5952 |
|---|---|
| Connectivity | 234 |
| Name | Vhl |
| Description | von Hippel-Lindau tumor suppressor |
| Notes | Von Hippel-Lindau syndrome (VHL) is a dominantly inherited familial cancer syndrome predisposing to a variety of malignant and benign tumors. A germline mutation of this gene is the basis of familial inheritance of VHL syndrome. The protein encoded by this gene is a component of the protein complex that includes elongin B, elongin C, and cullin-2, and possesses ubiquitin ligase E3 activity. This protein is involved in the ubiquitination and degradation of hypoxia-inducible-factor (HIF), which is a transcription factor that plays a central role in the regulation of gene expression by oxygen. RNA polymerase II subunit POLR2G/RPB7 is also reported to be a target of this protein. Alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq] |
| Pathway | hypoxia inducible factor pathway |
|---|---|
| altered hypoxia inducible factor pathway | |
| renal cell cancer pathway |
| GO Molecular Function | transcription factor binding |
|---|---|
| ubiquitin-protein ligase activity |
| GO Cellular Component | membrane |
|---|---|
| cytoplasm | |
| cytosol | |
| endoplasmic reticulum | |
| mitochondrion | |
| VCB complex | |
| transcription factor complex | |
| nucleus |
| GO Biological Process | negative regulation of cell proliferation |
|---|---|
| response to stress | |
| positive regulation of cell differentiation | |
| angiogenesis | |
| cell morphogenesis | |
| neuron differentiation | |
| extracellular matrix organization | |
| regulation of catecholamine metabolic process | |
| regulation of transcription | |
| negative regulation of transcription from RNA polymerase II promoter | |
| positive regulation of transcription | |
| regulation of transcription, DNA-dependent | |
| anti-apoptosis | |
| blood vessel endothelial cell migration | |
| protein ubiquitination | |
| modification-dependent protein catabolic process | |
| response to hypoxia | |
| response to ethanol | |
| protein stabilization | |
| protein heterooligomerization | |
| protein catabolic process | |
| proteolysis |
| Ariadne Ontology | Ubiquitin-dependent protein degradation |
|---|---|
| Tumor suppressors |
| Group | Ubiquitin-dependent protein degradation |
|---|---|
| Tumor suppressors | |
| negative regulation of cell proliferation | |
| response to stress | |
| positive regulation of cell differentiation | |
| angiogenesis | |
| cell morphogenesis | |
| neuron differentiation | |
| extracellular matrix organization | |
| regulation of catecholamine metabolic process | |
| regulation of transcription | |
| negative regulation of transcription from RNA polymerase II promoter | |
| positive regulation of transcription | |
| regulation of transcription, DNA-dependent | |
| anti-apoptosis | |
| blood vessel endothelial cell migration | |
| protein ubiquitination | |
| modification-dependent protein catabolic process | |
| response to hypoxia | |
| response to ethanol | |
| protein stabilization | |
| protein heterooligomerization | |
| protein catabolic process | |
| proteolysis | |
| transcription factor binding | |
| ubiquitin-protein ligase activity | |
| membrane | |
| cytoplasm | |
| cytosol | |
| endoplasmic reticulum | |
| mitochondrion | |
| VCB complex | |
| transcription factor complex | |
| nucleus |
| MedScan ID | 5952 |
|---|
| Hugo ID | 12687 |
|---|
| Human chromosome position | 3p26-p25 |
|---|
| LocusLink ID | 5952 |
|---|---|
| 7428 | |
| 22346 | |
| 24874 |
| Alias | RCA1 |
|---|---|
| VHL1 | |
| HRCA1 | |
| von Hippel-Lindau disease tumor suppressor | |
| pVHL | |
| protein G7 | |
| elongin binding protein | |
| Vhlh | |
| OTTMUSP00000028703 | |
| von Hippel-Lindau syndrome homolog | |
| von Hippel-Lindau syndrome protein homolog | |
| elongin-binding protein | |
| G7 PROTEIN | |
| HRCA I | |
| RCA I | |
| renal carcinoma, familial, associated 1 | |
| VHL gene | |
| VHL protein | |
| Von Hippel-Lindau disease tumour suppressor | |
| von Hippel-Lindau syndrome gene | |
| von Hippel-Lindau syndrome protein | |
| von Hippel-Lindau tumor suppressor | |
| von Hippel-Lindau tumour suppressor |
| Organism | Homo sapiens |
|---|---|
| Mus musculus | |
| Rattus norvegicus |
| OMIM ID | 608537 |
|---|---|
| 171300 | |
| 263400 | |
| 144700 | |
| 193300 |
| Mouse chromosome position | 6 49.45 cM |
|---|
| GO ID | 0008134 |
|---|---|
| 0001525 | |
| 0006916 | |
| 0043534 | |
| 0000902 | |
| 0030198 | |
| 0008285 | |
| 0000122 | |
| 0045597 | |
| 0045941 | |
| 0030163 | |
| 0051291 | |
| 0050821 | |
| 0016567 | |
| 0006508 | |
| 0042069 | |
| 0045449 | |
| 0006355 | |
| 0001666 | |
| 0006950 | |
| 0030891 | |
| 0005737 | |
| 0005829 | |
| 0005783 | |
| 0016020 | |
| 0005739 | |
| 0005634 | |
| 0030182 | |
| 0004842 | |
| 0045471 | |
| 0005667 | |
| 0019941 |
| Rat chromosome position | 4q41.3-q42.1 |
|---|
| Swiss-Prot Accession | P40337 |
|---|---|
| P40338 | |
| Q3TTE7 | |
| Q64259 | |
| Q64197 | |
| Q80WY8 | |
| B2RE45 | |
| Q13599 | |
| Q6PDA9 |
| PIR ID | T10752 |
|---|---|
| I38926 |
| Unigene ID | Hs.517792 |
|---|---|
| Mm.29407 | |
| Rn.11059 |
| KEGG ID | hsa:7428 |
|---|---|
| mmu:22346 | |
| rno:24874 |
| Swiss-Prot ID | VHL_RAT |
|---|---|
| VHL_MOUSE | |
| VHL_HUMAN | |
| Q3TTE7_MOUSE |
| Cell Localization | Cytoplasm |
|---|---|
| Membrane | |
| Nucleus |
| IPI ID | IPI00210924 |
|---|---|
| IPI00109233 | |
| IPI00027969 | |
| IPI00221186 | |
| IPI00336024 | |
| IPI00792496 |
| Homologene ID | 465 |
|---|
| RGD ID | 3960 |
|---|
| MGI ID | 103223 |
|---|