Protein Ptrf

URN urn:agi-llid:22939
Total Entities 0
Connectivity 132
Name Ptrf
Description polymerase I and transcript release factor
Notes This gene encodes a protein that enables the dissociation of paused ternary polymerase I transcription complexes from the 3' end of pre-rRNA transcripts. This protein regulates rRNA transcription by promoting the dissociation of transcription complexes and the reinitiation of polymerase I on nascent rRNA transcripts. This protein also localizes to caveolae at the plasma membrane and is thought to play a critical role in the formation of caveolae and the stabilization of caveolins. This protein translocates from caveolae to the cytoplasm after insulin stimulation. Caveolae contain truncated forms of this protein and may be the site of phosphorylation-dependent proteolysis. This protein is also thought to modify lipid metabolism and insulin-regulated gene expression. Mutations in this gene result in a disorder characterized by generalized lipodystrophy and muscular dystrophy. [provided by RefSeq, Nov 2009]

GO Molecular Function RNA binding
rRNA binding
rRNA primary transcript binding

GO Cellular Component membrane
caveola
nucleoplasm
plasma membrane
cytoplasm
cytosol
endoplasmic reticulum
mitochondrion
intracellular membrane-bounded organelle
nucleus

GO Biological Process regulation of transcription, DNA-templated
transcription, DNA-templated
DNA-templated transcription, termination
transcription from RNA polymerase I promoter
transcription initiation from RNA polymerase I promoter
termination of RNA polymerase I transcription
gene expression

Pathway Transcytosis
RNA polymerase I transcription pathway
RNA polymerase I transcription pathway

Group Polymerase I transcription
regulation of transcription, DNA-templated
transcription, DNA-templated
DNA-templated transcription, termination
transcription from RNA polymerase I promoter
transcription initiation from RNA polymerase I promoter
termination of RNA polymerase I transcription
gene expression
RNA binding
rRNA binding
rRNA primary transcript binding
membrane
caveola
nucleoplasm
plasma membrane
cytoplasm
cytosol
endoplasmic reticulum
mitochondrion
intracellular membrane-bounded organelle
nucleus

LocusLink ID 22939
284119
19285
287710

Cell Localization Nucleus
Membrane
Caveola
Cell membrane
Microsome
Endoplasmic reticulum
Cytoplasm
Cytosol
Mitochondrion

GO ID 0042134
0010467
0006355
0006363
0006360
0006361
0005901
0005737
0005829
0005783
0005739
0005654
0005634
0003723
0019843
0006353
0006351
0043231
0016020
0005886

Alias CGL4
CAVIN
CAVIN1
FKSG13
cavin-1
polymerase I and transcript release factor
TTF-I interacting peptide 12
RNA polymerase I and transcript release factor
Cav-p60
AW546441
2310075E07Rik
RP23-279L23.6
RIKEN cDNA 2310075E07 gene
polymerase I and transcript release factor/cavin-1
PTRF
PTRF/cavin-1
PTRF-CAVIN
TTF-I interactive peptide XII
Polymerase I and transcript release factor/Cavin
TTF-I interactive peptide 12
2310075E07
MGC118550
FLJ90031
OTTMUSP00000002049

Mouse chromosome position 11 63.95 cM
11 60.5 cM

OMIM ID 603198
613327

Rat chromosome position 10q32.1

Hugo ID 9688

Human chromosome position 17q21.2

Swiss-Prot Accession Q6NZI2
O54724
G3V8L9
P85125
B2RAW7
O00535
Q6GMY1
Q96H74
Q9BT85
Q9HAP4
Q2TAW6

GenBank ID NC_000017
XM_005257241
XP_005257298
NM_012232
NP_036364
XM_005257242
XP_005257299
NG_015845
NC_018928
AC_000149
ABBA01006425
AC107993
AMYH02033430
CH471152
EAW60828
AF000421
AAC63404
AF312393
AAG27093
AK000715
AK074512
AK092406
BAG52547
AK298072
BAG60361
AK298563
BAG60757
AK314389
BAG37014
AL050224
BC004295
AAH04295
BC008849
AAH08849
BC066123
AAH66123
BC073759
AAH73759
Q6NZI2
NC_000077
NM_008986
NP_033012
AC_000033
AAHY01095762
AF458959
AAL60240
AL591466
CH466677
EDL03863
AF036249
AAC53588
AK009381
AK010169
AK154132
BAE32397
AK169463
BAE41188
AK219684
BC065792
BC099493
BC110698
AAI10699
BC116701
AAI16702
BC117527
AAI17528
BY132697
O54724
NC_005109
NM_001105841
NP_001099311
AC_000078
AABR06065581
AAHX01066020
CH473948
EDM06070
P85125
CAM19459

Unigene ID Hs.437191
Mm.21864
Rn.219686

KEGG ID hsa:284119
mmu:19285
rno:287710

Swiss-Prot ID PTRF_HUMAN
PTRF_MOUSE

Ensembl ID ENSG00000177469
ENSP00000349541
ENST00000357037
ENSMUSG00000004044
ENSMUSP00000058321
ENSMUST00000060792
ENSRNOG00000019778
ENSRNOP00000026783
ENSRNOT00000026783

Homologene ID 7499

Organism Homo sapiens
Mus musculus
Rattus norvegicus

MGI ID 1277968

RGD ID 1307685

MedScan ID 22939

Primary Cell Localization Nucleus

IPI ID IPI00176903
IPI00513773
IPI01014936
IPI00117689