| Genes Help |
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| RGD Definition | ||||||||||||||||||||||||||
"the DNA sequence necessary and sufficient to express the complete complement of functional products derived from a unit of transcription" Splice variants for each gene are also listed in the gene report and specific information about these can be found in the associated splice variant report. Does not include:
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| Finding Gene information | ||||||||||||||||||||||||||
1. Using the General Search The general RGD search available at the top of each page is a quick route to finding genes. This will search gene symbols, names and aliases only. (See General RGD Search help for more information). 2. Using the Gene Search Form Quick Guide
Below is a more detailed explanation of each element of the search form which will allow you greater flexibility to refine your searches. Enter a gene symbol, alias or keyword to search for. The asterisk '*' is an accepted wildcard, in addition various other options are available to refine the search:
Restrict the returned genes to ones mapped to a particular chromosome. Excludes genes that are unmapped or mapped to a different chromosome This option allows the restriction of the fields to be searched and hence the scope of the returned results. The options are:
Limit to genes with associated SSLPs Restrict the returned genes to ones that have SSLPs (microsatellite markers) associated with them. Associated SSLPs are believed to be in linkage disequilibria with the gene itself and hence are markers for the gene on genetic and RH maps. Limit to genes with known Homologs Restrict the returned genes to ones which have a known homolog listed in RGD (from any organism) . Limit to genes annotated to ontology term Restricts the returned genes to ones that have been annotated to ontology concepts containing the entry term.
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| The report also contains information on objects related to this gene, including QTLs, SSLPs, homologs, mapping, GO annotation, and external database IDs. Links to these objects will provide additional information. [ back to top ] |
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| The Gene Report | ||||||||||||||||||||||||||
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Below is a description of each of the information sections available on the gene report which is generated when viewing data available for a particular gene. Not all information will be available for every gene.
The official gene symbol The official full text name for the gene Symbols that have been used to refer to this gene in the past. Names that have been used to refer to this gene in the past QTLs for which this gene has been reported to be a potential candidate gene. STS markers known to be closely linked to this gene Links a report of known mouse or human homologs of this gene Summary of known information about this gene including: Mapping information contained in RGD is shown for the gene itself if it has
been mapped directly onto one of the standard maps or has been located on the
cytogenic map by FISH or similar techniques. Also listed are any associated
SSLP map locations which are microsatellite markers that are closely linked
to the gene and hence have been used as markers for the gene location on other
maps. The mapping information is linked to further information as shown below: Links to other databases which have information about this gene. The links
are grouped by parent database and each link has a user-friendly text (e.g.
PubMed citation, LocusLink gene symbol, etc.) followed in parentheses by the
actual accession number used in the parent database (PubMed ID, LocusLink number). References curated by the RGD curation team that contain information pertaining
to this gene. [ back to top ] |
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