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Strain Registration

Strain: SHRSP.SHR-(D1Rat23-D1Rat213)(D18Rat73-D18Rat11)/Izm

Symbol: SHRSP.SHR-(D1Rat23-D1Rat213)(D18Rat73-D18Rat11)/Izm
Strain: SHRSP.SHR-(D1Rat23-D1Rat213)(D18Rat73-D18Rat11)
Substrain: Izm
RGD ID: 38599188
Citation ID: RRID:RGD_38599188
Ontology ID: RS:0004823
Also Known As: NBRP Rat No: 0892; SPrch1.31_18.5; SHRSP.SHR-(D1Rat23-D1Rat213)(D18Rat73-D18Rat11)/Izm
Type: congenic
Available Source: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Origination: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Description: A double congenic strain made by introducing a segments of chromosome 1 and 18 from SHR/Izm into SHRSP/Izm. Developed by Dr. Tohru Nabika from Shimane University.
Coat Color: white
Last Known Status: Cryopreserved Sperm (as of 2020-09-14)
Research Usage Hypertension and cerebral apoplexy
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8188,098,993 - 90,905,414RGD_MAPPER_PIPELINE
GRCr81852,198,059 - 70,689,286RGD_MAPPER_PIPELINE
mRatBN7.2178,970,983 - 81,777,720RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.21849,999,958 - 68,414,117RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0180,231,217 - 83,282,814RGD_MAPPER_PIPELINERnor_6.0
Rnor_6.01851,609,032 - 70,803,264RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.01850,804,228 - 69,942,605RGD_MAPPER_PIPELINERnor_5.0
Rnor_5.0181,497,710 - 84,537,228RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.41852,290,789 - 71,692,408RGD_MAPPER_PIPELINERGSC_v3.4
RGSC_v3.4178,685,103 - 81,548,909RGD_MAPPER_PIPELINERGSC_v3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP

Region

Position Markers

Flank 1 / 1 (D1Rat23)
Rat AssemblyChrPosition (strand)Source
GRCr8188,098,993 - 88,099,149 (+)Marker Load Pipeline
mRatBN7.2178,970,983 - 78,971,139 (+)MAPPER
Rnor_6.0180,231,217 - 80,231,372NCBI
Rnor_5.0181,497,710 - 81,497,865UniSTS
RGSC_v3.4178,685,103 - 78,685,258RGD
RGSC_v3.4178,685,104 - 78,685,259UniSTS
Celera173,433,201 - 73,433,356UniSTS
RGSC_v3.1178,763,214 - 78,763,369RGD
RH 3.4 Map1820.6UniSTS
RH 3.4 Map1820.6RGD
RH 2.0 Map1489.5RGD
SHRSP x BN Map140.2499RGD

Flank 2 / 1 (D1Rat213)
Rat AssemblyChrPosition (strand)Source
GRCr8190,905,258 - 90,905,414 (+)Marker Load Pipeline
mRatBN7.2181,777,564 - 81,777,720 (+)MAPPER
Rnor_6.0183,282,659 - 83,282,814NCBI
Rnor_5.0184,537,073 - 84,537,228UniSTS
RGSC_v3.4181,548,754 - 81,548,909UniSTS
RGSC_v3.4181,548,753 - 81,548,909RGD
Celera176,204,150 - 76,204,305UniSTS
RGSC_v3.1181,626,865 - 81,627,020RGD
RH 3.4 Map1841.1UniSTS
RH 3.4 Map1841.1RGD
FHH x ACI Map142.2599RGD
FHH x ACI Map142.2599UniSTS
Cytogenetic Map1q21UniSTS

Flank 1 / 2 (D18Rat73)
Rat AssemblyChrPosition (strand)Source
GRCr81852,198,059 - 52,198,268 (+)Marker Load Pipeline
mRatBN7.21849,999,958 - 50,000,167 (+)MAPPER
Rnor_6.01851,609,032 - 51,609,240NCBI
Rnor_5.01850,804,228 - 50,804,436UniSTS
RGSC_v3.41852,290,789 - 52,291,194RGD
RGSC_v3.41852,290,924 - 52,291,132UniSTS
Celera1848,145,282 - 48,145,490UniSTS
RGSC_v3.11852,336,284 - 52,336,689RGD
SHRSP x BN Map1819.1999RGD
SHRSP x BN Map1819.1999UniSTS

Flank 2 / 2 (D18Rat11)
Rat AssemblyChrPosition (strand)Source
GRCr81870,689,152 - 70,689,286 (+)Marker Load Pipeline
mRatBN7.21868,413,983 - 68,414,117 (+)MAPPER
Rnor_6.01870,803,131 - 70,803,264NCBI
Rnor_5.01869,942,468 - 69,942,605UniSTS
RGSC_v3.41871,692,274 - 71,692,408RGD
RGSC_v3.41871,692,275 - 71,692,408UniSTS
Celera1866,590,295 - 66,590,428UniSTS
RGSC_v3.11871,765,476 - 71,765,609RGD
RH 3.4 Map18698.1UniSTS
RH 3.4 Map18698.1RGD
RH 2.0 Map18211.5RGD
FHH x ACI Map1847.4699RGD

Additional Information