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Strain Registration

Strain: SHRSP.SHR-(D1Mgh5-D1Got87)(D18Rat73-D18Rat11)/Izm

Symbol: SHRSP.SHR-(D1Mgh5-D1Got87)(D18Rat73-D18Rat11)/Izm
Strain: SHRSP.SHR-(D18Rat73-D18Rat11)
Substrain: Izm
RGD ID: 38599187
Citation ID: RRID:RGD_38599187
Ontology ID: RS:0004822
Also Known As: SPrch1.10_18.5; NBRP Rat No: 0891; SHRSP.SHR-(D1Mgh5-D1Got87)(D18Rat73-D18Rat11)/Izm
Type: congenic
Available Source: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Origination: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Description: A double congenic strain made by introducing a segments of chromosome 1 and 18 from SHR/Izm into SHRSP/Izm. Developed by Dr. Tohru Nabika from Shimane University.
Coat Color: white
Last Known Status: Cryopreserved Sperm (as of 2020-09-14)
Research Usage Hypertension and cerebral apoplexy
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8187,558,587 - 87,558,729RGD_MAPPER_PIPELINE
GRCr81852,198,059 - 70,689,286RGD_MAPPER_PIPELINE
mRatBN7.2178,430,536 - 86,030,749RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.21849,999,958 - 68,414,117RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0179,689,548 - 91,156,803RGD_MAPPER_PIPELINERnor_6.0
Rnor_6.01851,609,032 - 70,803,264RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.01850,804,228 - 69,942,605RGD_MAPPER_PIPELINERnor_5.0
Rnor_5.0180,946,174 - 92,291,485RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.41852,290,789 - 71,692,408RGD_MAPPER_PIPELINERGSC_v3.4
RGSC_v3.4178,134,304 - 85,828,306RGD_MAPPER_PIPELINERGSC_v3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP

Region

Position Markers

Flank 1 / 1 (D1Mgh5)
Rat AssemblyChrPosition (strand)Source
GRCr8187,558,587 - 87,558,729 (+)Marker Load Pipeline
mRatBN7.2178,430,536 - 78,430,678 (+)MAPPER
Rnor_6.0179,689,548 - 79,689,689NCBI
Rnor_5.0180,946,174 - 80,946,315UniSTS
RGSC_v3.4178,134,304 - 78,134,446RGD
RGSC_v3.4178,134,305 - 78,134,446UniSTS
Celera172,898,184 - 72,898,325UniSTS
RGSC_v3.1178,212,415 - 78,212,557RGD
RH 3.4 Map1791.5UniSTS
RH 3.4 Map1791.5RGD
RH 2.0 Map1501.0RGD
SHRSP x BN Map140.2499RGD
FHH x ACI Map140.1RGD
Cytogenetic Map1q21UniSTS

Flank 2 / 1 (D1Got87)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2186,030,510 - 86,030,749 (+)MAPPER
Rnor_6.0191,156,565 - 91,156,803NCBI
Rnor_6.0189,228,970 - 89,229,208NCBI
Rnor_5.0192,291,247 - 92,291,485UniSTS
Rnor_5.0190,385,411 - 90,385,649UniSTS
RGSC_v3.4185,828,067 - 85,828,306RGD
RGSC_v3.4185,828,068 - 85,828,306UniSTS
Celera180,401,941 - 80,402,179UniSTS
RGSC_v3.1185,906,179 - 85,906,417RGD
RH 3.4 Map1844.0UniSTS
RH 3.4 Map1844.0RGD
RH 2.0 Map1559.7RGD
Cytogenetic Map1q21UniSTS

Flank 1 / 2 (D18Rat73)
Rat AssemblyChrPosition (strand)Source
GRCr81852,198,059 - 52,198,268 (+)Marker Load Pipeline
mRatBN7.21849,999,958 - 50,000,167 (+)MAPPER
Rnor_6.01851,609,032 - 51,609,240NCBI
Rnor_5.01850,804,228 - 50,804,436UniSTS
RGSC_v3.41852,290,789 - 52,291,194RGD
RGSC_v3.41852,290,924 - 52,291,132UniSTS
Celera1848,145,282 - 48,145,490UniSTS
RGSC_v3.11852,336,284 - 52,336,689RGD
SHRSP x BN Map1819.1999RGD
SHRSP x BN Map1819.1999UniSTS

Flank 2 / 2 (D18Rat11)
Rat AssemblyChrPosition (strand)Source
GRCr81870,689,152 - 70,689,286 (+)Marker Load Pipeline
mRatBN7.21868,413,983 - 68,414,117 (+)MAPPER
Rnor_6.01870,803,131 - 70,803,264NCBI
Rnor_5.01869,942,468 - 69,942,605UniSTS
RGSC_v3.41871,692,274 - 71,692,408RGD
RGSC_v3.41871,692,275 - 71,692,408UniSTS
Celera1866,590,295 - 66,590,428UniSTS
RGSC_v3.11871,765,476 - 71,765,609RGD
RH 3.4 Map18698.1UniSTS
RH 3.4 Map18698.1RGD
RH 2.0 Map18211.5RGD
FHH x ACI Map1847.4699RGD

Additional Information