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Strain Registration

General

Strain: F344.OLETF-(D14Rat143-D14Rat12)/Tj

Symbol:

F344.OLETF-(D14Rat143-D14Rat12)/Tj

Strain:

F344.OLETF-(D14Rat143-D14Rat12)

Substrain:

RGD ID:

2304058

Citation ID:

RRID:RGD_2304058

Ontology ID:

RS:0001942

Also Known As:

F344.OLETF-(D14Rat143-D14Rat12)/Tj; F.O-Nidd2/rat143.of; F.O-Nidd2/rat143.of; NBRP Rat No: 0190; F344.OLETF-(D14Rat143-D14Rat12)/Tj

Type:

congenic

Available Source:

National BioResource Project for the Rat in Japan

Origination:

National BioResource Project for the Rat in Japan

Description:

Established as speed congenics (5 generations, microsatellite marker) at the University of Tokushima School of Medicine, Institute for Animal Experimentation in 1998. Afterwards, maintained by sib mating.

Inbred Generations:

Last Known Status:

Cryopreserved Embryo

Research Usage

Diabetes Obesity

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	14	18,496,705 - 39,507,682	RGD_MAPPER_PIPELINE
mRatBN7.2	14	18,212,584 - 39,153,750	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	14	19,847,829 - 61,783,215	RGD_MAPPER_PIPELINE	Rnor_6.0
Rnor_5.0	14	19,754,557 - 61,886,417	RGD_MAPPER_PIPELINE	Rnor_5.0
RGSC_v3.4	14	19,738,306 - 41,707,592	RGD_MAPPER_PIPELINE	RGSC_v3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Strains registered by the National Bio Resource Project for the Rat in Japan	Personal Communication with NBRP
2.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D14Rat143)

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	18,496,705 - 18,496,830 (+)	Marker Load Pipeline
mRatBN7.2	14	18,212,584 - 18,212,709 (+)	MAPPER
Rnor_6.0	14	19,847,829 - 19,847,953	NCBI
Rnor_5.0	14	19,754,557 - 19,754,681	UniSTS
RGSC_v3.4	14	19,738,306 - 19,738,431	RGD
RGSC_v3.4	14	19,738,307 - 19,738,431	UniSTS
Celera	14	17,578,740 - 17,578,864	UniSTS
RGSC_v3.1	14	19,738,307 - 19,738,431	RGD
RH 3.4 Map	14	249.0	RGD
RH 3.4 Map	14	249.0	UniSTS
FHH x ACI Map	14	19.4299	UniSTS
FHH x ACI Map	14	19.4299	RGD

Flank 2 / 1 (D14Rat12)

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	39,507,513 - 39,507,682 (+)	Marker Load Pipeline
mRatBN7.2	14	39,153,581 - 39,153,750 (-)	MAPPER
Rnor_6.0	14	61,783,047 - 61,783,215	NCBI
Rnor_5.0	14	61,886,249 - 61,886,417	UniSTS
RGSC_v3.4	14	41,707,423 - 41,707,592	RGD
RGSC_v3.4	14	41,707,424 - 41,707,592	UniSTS
Celera	14	38,346,383 - 38,346,551	UniSTS
RGSC_v3.1	14	41,709,814 - 41,709,983	RGD
RH 2.0 Map	14	500.7	RGD
SHRSP x BN Map	14	27.1799	RGD

Additional Information

RGD Curation Notes

Note Type	Note	Reference
strain_reproduction	Good breeding performance.	1302502

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: F344.OLETF-(D14Rat143-D14Rat12)/Tj