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Strain Registration

Strain: OLETF.F344-(D1Rat166-D1Rat90)/Tj

Symbol: OLETF.F344-(D1Rat166-D1Rat90)/Tj
Strain: OLETF.F344-(D1Rat166-D1Rat90)
Substrain: Tj
RGD ID: 1299874
Citation ID: RRID:RGD_1299874
Ontology ID: RS:0000624
Also Known As: Intramuscular fat-minor; OLETF.F344-(D1Rat166-D1Rat90)/Kyo; F344.OLETF-Imfm; OLETF.F344-(D1Rat166-D1Rat90)/Tj;NBRP Rat No: 0065;O.F-Nidd6/F344; OLETF.F344-(D1Rat166-D1Rat90)/Tj
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: Laboratory of Animal Breeding and Genetics, Kyoto University, Kyoto, Japan
Description: Female OLETF were crossed with male F344 rats. The male F1 progeny were backcrossed with female F344 to produce the BC1. Five generations of backcross matings were made between selective males from the BC1 and F344 females to produce the new congenic strain. Sucessive generations were maintained by a standard brother-sister mating protocol.
Inbred Generations: F5
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81258,334,277 - 269,633,915RGD_MAPPER_PIPELINE
mRatBN7.21248,393,012 - 259,647,894RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01269,279,863 - 281,795,785RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.01276,721,459 - 289,137,268RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.41255,026,793 - 267,111,153RGD_MAPPER_PIPELINERGSC_v3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. A congenic strain (F344.OLETF-Imfm) displays the existence of intramuscular fat accumulation QTL on rat chromosome 1. Tanomura H, etal., Exp Anim 2003 Jul;52(4):303-8.

Region

Position Markers

Flank 1 / 1 (D1Rat166)
Rat AssemblyChrPosition (strand)Source
GRCr81258,334,277 - 258,334,422 (+)Marker Load Pipeline
mRatBN7.21248,393,012 - 248,393,157 (+)MAPPER
Rnor_6.01269,279,863 - 269,280,007NCBI
Rnor_5.01276,721,459 - 276,721,603UniSTS
RGSC_v3.41255,026,793 - 255,026,938RGD
RGSC_v3.41255,026,794 - 255,026,938UniSTS
Celera1244,134,087 - 244,134,231UniSTS
RGSC_v3.11255,292,700 - 255,292,844RGD
RH 3.4 Map11652.1UniSTS
RH 3.4 Map11652.1RGD
RH 2.0 Map11263.7RGD
SHRSP x BN Map1141.35RGD

Flank 2 / 1 (D1Rat90)
Rat AssemblyChrPosition (strand)Source
GRCr81269,633,753 - 269,633,915 (+)Marker Load Pipeline
mRatBN7.21259,647,732 - 259,647,894 (+)MAPPER
Rnor_6.01281,795,624 - 281,795,785NCBI
Rnor_5.01289,137,107 - 289,137,268UniSTS
RGSC_v3.41267,110,921 - 267,111,153RGD
RGSC_v3.41267,110,926 - 267,111,087UniSTS
Celera1255,291,309 - 255,291,470UniSTS
RGSC_v3.11267,322,011 - 267,322,172RGD
RH 3.4 Map11708.8UniSTS
RH 3.4 Map11708.8RGD
RH 2.0 Map11313.1999RGD
SHRSP x BN Map1148.15RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-08 OLETF.F344-(D1Rat166-D1Rat90)/Tj    OLETF.F344-(D1Rat166-D1Rat90)/Tj    Name updated 68913 APPROVED