Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways

Strain: ExHC.BN-(D14Got74-D14Rat132)/Kyu

Symbol: ExHC.BN-(D14Got74-D14Rat132)/Kyu
Strain: ExHC.BN-(D14Got74-D14Rat132)
Substrain: Kyu
RGD ID: 12879426
Citation ID: RRID:RGD_12879426
Ontology ID: RS:0004412
Also Known As: NBRP Rat No: 0849; Ex.BN-Smek2; ExHC.BN-(D14Got74-D14Rat132)/Kyu
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: This congenic strain was established by introducing a segment of chromosome14 (D14Got74-D14Rat132 including Smek2 gene) from Brown Norway(BN)/seac strain into ExHC/Seac strain.
Coat Color: albino
Inbred Generations: F21
Last Known Status: Cryopreserved Embryo (as of 2017-04-19)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr814104,348,403 - 104,348,525RGD_MAPPER_PIPELINE
mRatBN7.21496,644,199 - 100,147,478RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.014107,428,559 - 110,402,569RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.014107,489,676 - 110,102,984RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.414103,289,672 - 107,101,727RGD_MAPPER_PIPELINERGSC_v3.4






References

Region

Position Markers

Flank 1 / 1 (D14Got74)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21496,644,199 - 96,644,487 (+)MAPPER
Rnor_6.014107,428,559 - 107,428,846NCBI
Rnor_5.014107,489,676 - 107,489,963UniSTS
RGSC_v3.414103,289,673 - 103,289,960UniSTS
RGSC_v3.414103,289,672 - 103,289,960RGD
Celera1495,633,097 - 95,633,384UniSTS
RGSC_v3.114103,308,884 - 103,309,171RGD
RH 3.4 Map14768.0UniSTS
RH 3.4 Map14768.0RGD
RH 2.0 Map14835.7RGD

Flank 2 / 1 (D14Rat132)
Rat AssemblyChrPosition (strand)Source
GRCr814104,348,403 - 104,348,525 (+)Marker Load Pipeline
mRatBN7.214100,147,356 - 100,147,478 (+)MAPPER
Rnor_6.014110,402,448 - 110,402,569NCBI
Rnor_5.014110,102,863 - 110,102,984UniSTS
RGSC_v3.414107,101,605 - 107,101,727RGD
RGSC_v3.414107,101,606 - 107,101,727UniSTS
Celera1499,084,151 - 99,084,273UniSTS
RGSC_v3.114107,120,816 - 107,120,938RGD
SHRSP x BN Map1471.2399RGD
SHRSP x BN Map1471.2399UniSTS

Additional Information