Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Strain Registration

Strain: SS-P2rx1em6Mcwi

Symbol: SS-P2rx1em6Mcwi
Strain: SS-P2rx1em6
Substrain: Mcwi
RGD ID: 12790676
Citation ID: RRID:RGD_12790676
Ontology ID: RS:0004348
Alleles: P2rx1em6Mcwi
Also Known As: SS-P2rx1em6Mcwi; SS-P2rx1^[em6Mcwi]
Type: mutant
Available Source: Contact MCW rat distribution at mcwcustomrats@mcw.edu
Origination: MCW Gene Editing Rat Resource Center
Description: CRISPR/Cas9 system was used to introduce a mutation in the P2rx1 gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 2-bp deletion in Exon 2 of the P2rx1 gene.
Last Known Status: Cryorecovery (as of 2017-02-20)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21057,626,714 - 57,626,715RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01059,566,268 - 59,581,328RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01059,305,737 - 59,320,797RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41059,889,933 - 59,904,985RGD_MAPPER_PIPELINERGSC3.4






References

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
P2rx1em6Mcwi-var1 chr10 57626714 57626715 GG - deletion mRatBN7.2

Additional Information