Nfkbie (NFKB inhibitor epsilon) - Rat Genome Database

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Gene: Nfkbie (NFKB inhibitor epsilon) Rattus norvegicus
Analyze
Symbol: Nfkbie
Name: NFKB inhibitor epsilon
RGD ID: 735070
Description: Involved in D-serine transmembrane transport. Located in perinuclear region of cytoplasm. Orthologous to human NFKBIE (NFKB inhibitor epsilon); PARTICIPATES IN nuclear factor kappa B signaling pathway; B cell receptor signaling pathway; neurotrophic factor signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC72568; NF-kappa-B inhibitor epsilon; nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon; Slc35b2; solute carrier family 35, member B2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,941,037 - 22,947,872 (-)NCBIGRCr8
mRatBN7.2915,443,600 - 15,450,437 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl915,436,941 - 15,450,437 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx924,030,126 - 24,036,913 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0929,092,803 - 29,099,590 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0927,393,565 - 27,400,352 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,828,405 - 17,835,240 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,828,408 - 17,835,240 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0916,717,126 - 16,723,961 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4911,044,112 - 11,050,948 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1911,041,436 - 11,048,270 (-)NCBI
Celera913,186,838 - 13,193,673 (-)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NfkbieRatExperimental Liver Cirrhosis  ISONFKBIE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136
NfkbieRatmelanoma  ISONFKBIE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:26343386
NfkbieRatrheumatoid arthritis  ISONFKBIE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22446963

1 to 20 of 126 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NfkbieRat(S)-nicotine decreases expressionISONFKBIE (Homo sapiens)6480464Nicotine results in decreased expression of NFKBIE mRNACTDPMID:18247414
NfkbieRat1,1-dichloroethene increases expressionISONfkbie (Mus musculus)6480464vinylidene chloride results in increased expression of NFKBIE mRNACTDPMID:26682919
NfkbieRat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of NFKBIE mRNACTDPMID:25380136
NfkbieRat17beta-estradiol increases expressionISONFKBIE (Homo sapiens)6480464Estradiol results in increased expression of NFKBIE mRNACTDPMID:31614463
NfkbieRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISONfkbie (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of NFKBIE mRNACTDPMID:19770486
NfkbieRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of NFKBIE mRNACTDPMID:33387578
NfkbieRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISONfkbie (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of NFKBIE mRNACTDPMID:21570461
NfkbieRat2-hydroxypropanoic acid increases expressionISONFKBIE (Homo sapiens)6480464Lactic Acid results in increased expression of NFKBIE mRNACTDPMID:30851411
NfkbieRat2-naphthylamine decreases expressionISONFKBIE (Homo sapiens)64804642-Naphthylamine results in decreased expression of NFKBIE mRNACTDPMID:18247414
NfkbieRat4,4'-diaminodiphenylmethane increases expressionEXP 64804644 and 4'-diaminodiphenylmethane results in increased expression of NFKBIE mRNACTDPMID:25380136
NfkbieRat4-hydroxynon-2-enal increases expressionISONfkbie (Mus musculus)64804644-hydroxy-2-nonenal results in increased expression of NFKBIE mRNACTDPMID:19191707
NfkbieRat4-hydroxyphenyl retinamide increases expressionISONfkbie (Mus musculus)6480464Fenretinide results in increased expression of NFKBIE mRNACTDPMID:28973697
NfkbieRat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of NFKBIE mRNACTDPMID:24780913
NfkbieRatacetamide increases expressionEXP 6480464acetamide results in increased expression of NFKBIE mRNACTDPMID:31881176
NfkbieRatacrylamide increases expressionEXP 6480464Acrylamide results in increased expression of NFKBIE mRNACTDPMID:28959563
NfkbieRataflatoxin B1 increases expressionISONfkbie (Mus musculus)6480464Aflatoxin B1 results in increased expression of NFKBIE mRNACTDPMID:19770486
NfkbieRataflatoxin B1 affects expressionISONFKBIE (Homo sapiens)6480464Aflatoxin B1 affects the expression of NFKBIE proteinCTDPMID:20106945
NfkbieRatall-trans-retinoic acid increases expressionISONFKBIE (Homo sapiens)6480464Tretinoin results in increased expression of NFKBIE mRNACTDPMID:33167477
NfkbieRatalpha-Zearalanol increases expressionEXP 6480464Zeranol results in increased expression of NFKBIE mRNACTDPMID:35163327
NfkbieRatandrographolide increases expressionISONFKBIE (Homo sapiens)6480464andrographolide results in increased expression of NFKBIE mRNACTDPMID:35724838

1 to 20 of 126 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NfkbieRatD-serine transmembrane transport  IMP 2302399 RGD 
NfkbieRatnegative regulation of canonical NF-kappaB signal transduction involved_inIEAUniProtKB:O54910 and ensembl:ENSMUSP000000247421600115GO_REF:0000107EnsemblGO_REF:0000107

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NfkbieRatcytoplasm is_active_inIBAPANTHER:PTN000650578 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NfkbieRatcytoplasm located_inISONFKBIE (Homo sapiens)1624291 PMID:9135156RGDPMID:9135156
NfkbieRatcytosol located_inISONFKBIE (Homo sapiens)1624291 RGDGO_REF:0000052
NfkbieRatcytosol located_inIEAUniProtKB:Q7LC14 and ensembl:ENSP000004802161600115GO_REF:0000107EnsemblGO_REF:0000107
NfkbieRatfibrillar center located_inISONFKBIE (Homo sapiens)1624291 RGDGO_REF:0000052
NfkbieRatfibrillar center located_inIEAUniProtKB:Q7LC14 and ensembl:ENSP000004802161600115GO_REF:0000107EnsemblGO_REF:0000107
NfkbieRatnucleoplasm located_inIEAUniProtKB:Q7LC14 and ensembl:ENSP000004802161600115GO_REF:0000107EnsemblGO_REF:0000107
NfkbieRatnucleoplasm located_inISONFKBIE (Homo sapiens)1624291 RGDGO_REF:0000052
NfkbieRatperinuclear region of cytoplasm  IDA 2302399 RGD 
1 to 9 of 9 rows

Molecular Function

  

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NfkbieRatnuclear factor kappa B signaling pathway   ISONFKBIE (Homo sapiens)2292172 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NfkbieRatB cell receptor signaling pathway  IEA 6907045 KEGGrno:04662
NfkbieRatneurotrophic factor signaling pathway  IEA 6907045 KEGGrno:04722
NfkbieRatT cell receptor signaling pathway  IEA 6907045 KEGGrno:04660

1 to 10 of 10 rows
#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Shared principles in NF-kappaB signaling. Hayden MS and Ghosh S, Cell. 2008 Feb 8;132(3):344-62.
4. Molecular physiology and pathology of the nucleotide sugar transporter family (SLC35). Ishida N and Kawakita M, Pflugers Arch 2004 Feb;447(5):768-75. Epub 2003 May 21.
5. Molecular cloning and identification of 3'-phosphoadenosine 5'-phosphosulfate transporter. Kamiyama S, etal., J Biol Chem 2003 Jul 11;278(28):25958-63. Epub 2003 Apr 25.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. Inhibition of D-serine accumulation in the Xenopus oocyte by expression of the rat ortholog of human 3'-phosphoadenosine 5'-phosphosulfate transporter gene isolated from the neocortex as D-serine modulator-1. Shimazu D, etal., J Neurochem. 2006 Jan;96(1):30-42. Epub 2005 Nov 8.
10. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
1 to 10 of 10 rows


Nfkbie
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,941,037 - 22,947,872 (-)NCBIGRCr8
mRatBN7.2915,443,600 - 15,450,437 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl915,436,941 - 15,450,437 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx924,030,126 - 24,036,913 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0929,092,803 - 29,099,590 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0927,393,565 - 27,400,352 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,828,405 - 17,835,240 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,828,408 - 17,835,240 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0916,717,126 - 16,723,961 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4911,044,112 - 11,050,948 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1911,041,436 - 11,048,270 (-)NCBI
Celera913,186,838 - 13,193,673 (-)NCBICelera
Cytogenetic Map9q12NCBI
NFKBIE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38644,258,166 - 44,265,551 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl644,258,166 - 44,265,788 (-)EnsemblGRCh38hg38GRCh38
GRCh37644,225,903 - 44,233,288 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36644,333,881 - 44,341,503 (-)NCBINCBI36Build 36hg18NCBI36
Build 34644,334,404 - 44,341,503NCBI
Celera645,779,052 - 45,786,678 (-)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef643,947,918 - 43,955,542 (-)NCBIHuRef
CHM1_1644,229,610 - 44,237,246 (-)NCBICHM1_1
T2T-CHM13v2.0644,092,317 - 44,099,688 (-)NCBIT2T-CHM13v2.0
Nfkbie
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391745,866,626 - 45,874,095 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1745,866,629 - 45,874,095 (+)EnsemblGRCm39 Ensembl
GRCm381745,555,700 - 45,563,169 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1745,555,703 - 45,563,169 (+)EnsemblGRCm38mm10GRCm38
MGSCv371745,692,665 - 45,700,118 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361745,019,297 - 45,026,750 (+)NCBIMGSCv36mm8
Celera1748,988,415 - 48,995,813 (+)NCBICelera
Cytogenetic Map17B3NCBI
cM Map1722.58NCBI
Nfkbie
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554379,882,460 - 9,888,952 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554379,882,460 - 9,888,848 (-)NCBIChiLan1.0ChiLan1.0
NFKBIE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2558,762,193 - 58,772,393 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1654,632,285 - 54,642,475 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0643,853,921 - 43,861,686 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1645,137,160 - 45,144,699 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl645,138,209 - 45,144,680 (-)Ensemblpanpan1.1panPan2
NFKBIE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11212,668,664 - 12,674,146 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1212,694,054 - 12,702,366 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01213,151,713 - 13,160,030 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1213,151,717 - 13,160,137 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11212,677,143 - 12,685,399 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01212,764,624 - 12,772,929 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01212,858,827 - 12,867,147 (-)NCBIUU_Cfam_GSD_1.0
Nfkbie
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494648,134,122 - 48,141,644 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647615,818,554 - 15,826,327 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647615,818,605 - 15,825,558 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NFKBIE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl739,255,075 - 39,263,339 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1739,255,078 - 39,266,085 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2745,124,531 - 45,133,184 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NFKBIE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11727,901,990 - 27,909,983 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1727,902,389 - 27,910,440 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604444,312,243 - 44,319,949 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nfkbie
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475415,593,765 - 15,605,788 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475415,593,755 - 15,605,998 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Nfkbie
10 total Variants

Predicted Target Of
Summary Value
Count of predictions:65
Count of miRNA genes:58
Interacting mature miRNAs:61
Transcripts:ENSRNOT00000026988
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 18 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat

1 to 10 of 18 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000026988   ⟹   ENSRNOP00000026988
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl915,443,603 - 15,450,437 (-)Ensembl
Rnor_6.0 Ensembl917,828,408 - 17,835,240 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114315   ⟹   ENSRNOP00000096074
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl915,436,941 - 15,450,437 (-)Ensembl
RefSeq Acc Id: NM_199111   ⟹   NP_954542
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,941,037 - 22,947,872 (-)NCBI
mRatBN7.2915,443,600 - 15,450,437 (-)NCBI
Rnor_6.0917,828,405 - 17,835,240 (-)NCBI
Rnor_5.0916,717,126 - 16,723,961 (-)NCBI
RGSC_v3.4911,044,112 - 11,050,948 (-)RGD
Celera913,186,838 - 13,193,673 (-)RGD
Sequence:
Protein RefSeqs NP_954542 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH61795 (Get FASTA)   NCBI Sequence Viewer  
  EDM18736 (Get FASTA)   NCBI Sequence Viewer  
  EDM18737 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000026988
  ENSRNOP00000026988.3
  ENSRNOP00000096074.1
RefSeq Acc Id: NP_954542   ⟸   NM_199111
- UniProtKB: Q6P780 (UniProtKB/TrEMBL),   F7FL44 (UniProtKB/TrEMBL),   A0A8I6ASQ1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026988   ⟸   ENSRNOT00000026988
Ensembl Acc Id: ENSRNOP00000096074   ⟸   ENSRNOT00000114315

Name Modeler Protein Id AA Range Protein Structure
AF-Q6P780-F1-model_v2 AlphaFold Q6P780 1-365 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13696542
Promoter ID:EPDNEW_R7067
Type:initiation region
Name:Nfkbie_1
Description:NFKB inhibitor epsilon
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0917,835,258 - 17,835,318EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-28173 BioCyc
Ensembl Genes ENSRNOG00000019907 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000026988 ENTREZGENE
  ENSRNOT00000026988.5 UniProtKB/TrEMBL
  ENSRNOT00000114315.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:5597840 IMAGE-MGC_LOAD
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  NF-kappa-B_inhibitor UniProtKB/TrEMBL
KEGG Report rno:316241 UniProtKB/TrEMBL
MGC_CLONE MGC:72568 IMAGE-MGC_LOAD
NCBI Gene 316241 ENTREZGENE
PANTHER NF-KAPPA-B INHIBITOR ALPHA UniProtKB/TrEMBL
  NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
PhenoGen Nfkbie PhenoGen
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019907 RatGTEx
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A0A8I6ASQ1 ENTREZGENE, UniProtKB/TrEMBL
  F7FL44 ENTREZGENE, UniProtKB/TrEMBL
  Q6P780 ENTREZGENE, UniProtKB/TrEMBL
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-01 Nfkbie  NFKB inhibitor epsilon  Nfkbie  nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Nfkbie  nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon  Slc35b2  solute carrier family 35, member B2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-08 Slc35b2  solute carrier family 35, member B2      Symbol and Name status set to approved 1299863 APPROVED