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Gene: Tenm2 (teneurin transmembrane protein 2) Rattus norvegicus

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Symbol:

Tenm2

Name:

teneurin transmembrane protein 2

RGD ID:

727907

Description:

Enables cell adhesion molecule binding activity and signaling receptor binding activity. Predicted to be involved in several processes, including negative regulation of transcription by RNA polymerase II; positive regulation of filopodium assembly; and retrograde trans-synaptic signaling by trans-synaptic protein complex. Located in dendritic spine and postsynaptic membrane. Is active in glutamatergic synapse. Is extrinsic component of postsynaptic membrane. Orthologous to human TENM2 (teneurin transmembrane protein 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Lasso; LOC102551468; neurestin; odd Oz/ten-m homolog 2; odd Oz/ten-m homolog 2 (Drosophila); odz, odd Oz/ten-m homolog 2; odz, odd Oz/ten-m homolog 2 (Drosophila); Odz2; ten-2; ten-m2; tenascin-M2; teneurin-2; teneurin-2-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TENM2 (teneurin transmembrane protein 2)	HGNC	Ensembl, HomoloGene, Inparanoid, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Tenm2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tenm2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TENM2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TENM2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tenm2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TENM2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TENM2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tenm2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Tenm2 (teneurin transmembrane protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TRIM7 (tripartite motif containing 7)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TENM2 (teneurin transmembrane protein 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tenm2 (teneurin transmembrane protein 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-34l15.2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-12m10.1	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Ten-a	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ten-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ten-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Ten-m	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tenm2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	20,985,902 - 22,447,611 (-)	Ensembl				GRCr8
mRatBN7.2	10	20,480,662 - 21,706,415 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	20,481,854 - 21,705,597 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	25,229,591 - 26,365,979 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	24,718,139 - 25,854,542 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	20,205,571 - 21,341,852 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	20,846,091 - 21,791,771 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	20,844,899 - 21,265,026 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	20,716,458 - 21,659,087 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	20,939,207 - 21,888,443 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	20,101,901 - 21,233,134 (-)	NCBI		Celera
RGSC_v3.1	10	20,940,255 - 22,096,609 (-)	NCBI
Cytogenetic Map	10	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

esophageal atresia (ISO)

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

beta-naphthoflavone (EXP)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

bromobenzene (EXP)

Butylbenzyl phthalate (ISO)

cannabidiol (ISO)

chlorpyrifos (EXP)

chromium(6+) (ISO)

chrysene (ISO)

cocaine (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dorsomorphin (ISO)

doxorubicin (EXP,ISO)

ethanol (ISO)

fenvalerate (EXP)

formaldehyde (ISO)

fulvestrant (ISO)

genistein (ISO)

GSK-J4 (ISO)

Heliotrine (ISO)

indole-3-methanol (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

Muraglitazar (EXP)

N,N-diethyl-m-toluamide (EXP)

N-nitrosodiethylamine (EXP,ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

orphenadrine (EXP)

panobinostat (ISO)

permethrin (EXP)

phenylmercury acetate (ISO)

piperonyl butoxide (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

potassium dichromate (ISO)

rac-lactic acid (ISO)

rotenone (EXP)

SB 431542 (ISO)

senecionine (ISO)

Senkirkine (ISO)

sodium arsenite (ISO)

sodium lactate (ISO)

sunitinib (ISO)

Tesaglitazar (EXP)

testosterone (EXP)

thioacetamide (EXP)

toxaphene (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IEA)

cell-cell adhesion (ISS)

DNA-templated transcription (IEA)

negative regulation of transcription by RNA polymerase II (ISS)

neuron development (IBA)

positive regulation of filopodium assembly (ISS)

retrograde trans-synaptic signaling by trans-synaptic protein complex (IEA,ISO)

signal transduction (IEA)

Cellular Component

cell junction (ISS)

cell projection (IEA)

cell-cell junction (ISO,ISS)

dendrite (ISS)

dendritic spine (IDA,IEA)

endoplasmic reticulum (IEA,ISS)

extrinsic component of postsynaptic membrane (IDA,IEP,IMP)

filopodium (IEA,ISS)

glutamatergic synapse (IDA,IEP,IMP)

Golgi apparatus (IEA,ISS)

growth cone (IEA,ISS)

membrane (IEA)

neuron projection (IBA,IDA)

nucleus (ISS)

plasma membrane (IDA,IEA,ISO,ISS)

PML body (IEA,ISS)

postsynaptic membrane (IDA,IEA)

presynaptic membrane (IEA)

synapse (IDA,IEA)

Molecular Function

calcium ion binding (IEA)

cell adhesion molecule binding (IBA,IDA,ISO)

identical protein binding (ISO)

protein binding (IPI,ISO)

protein heterodimerization activity (IBA,ISO,ISS)

protein homodimerization activity (IBA,ISO,ISS)

signaling receptor binding (IDA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
4.	Neurestin: putative transmembrane molecule implicated in neuronal development.	Otaki JM and Firestein S, Dev Biol 1999 Aug 1;212(1):165-81.
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Latrophilin 1 and its endogenous ligand Lasso/teneurin-2 form a high-affinity transsynaptic receptor pair with signaling capabilities.	Silva JP, etal., Proc Natl Acad Sci U S A. 2011 Jul 19;108(29):12113-8. doi: 10.1073/pnas.1019434108. Epub 2011 Jul 1.

Additional References at PubMed

PMID:12000766

Genomics

Comparative Map Data

Tenm2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	20,985,902 - 22,447,611 (-)	Ensembl				GRCr8
mRatBN7.2	10	20,480,662 - 21,706,415 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	20,481,854 - 21,705,597 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	25,229,591 - 26,365,979 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	24,718,139 - 25,854,542 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	20,205,571 - 21,341,852 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	20,846,091 - 21,791,771 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	20,844,899 - 21,265,026 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	20,716,458 - 21,659,087 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	20,939,207 - 21,888,443 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	20,101,901 - 21,233,134 (-)	NCBI		Celera
RGSC_v3.1	10	20,940,255 - 22,096,609 (-)	NCBI
Cytogenetic Map	10	q12	NCBI

TENM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	166,979,029 - 168,264,157 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	166,979,029 - 168,264,157 (+)	Ensembl			hg38	GRCh38
GRCh37	5	166,406,034 - 167,691,162 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	167,114,519 - 167,623,740 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	167,477,951 - 167,623,739	NCBI
Celera	5	162,750,499 - 163,726,534 (+)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI
HuRef	5	161,812,425 - 162,791,103 (+)	NCBI		HuRef
CHM1_1	5	166,144,311 - 167,124,193 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	167,513,669 - 168,798,988 (+)	NCBI		T2T-CHM13v2.0

Tenm2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	35,897,483 - 37,881,486 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	35,897,483 - 37,126,791 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	36,006,656 - 37,237,053 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	36,006,656 - 37,235,964 (-)	Ensembl			mm10	GRCm38
MGSCv37	11	35,820,171 - 36,757,745 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	35,851,071 - 36,787,666 (-)	NCBI		MGSCv36	mm8
Celera	11	40,009,205 - 40,811,666 (-)	NCBI		Celera
Cytogenetic Map	11	A4- A5	NCBI
cM Map	11	21.96	NCBI

Tenm2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	20,437,067 - 21,338,897 (+)	Ensembl
ChiLan1.0	NW_004955408	20,150,223 - 21,340,276 (+)	NCBI	ChiLan1.0	ChiLan1.0

TENM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	160,186,848 - 163,424,969 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	158,326,399 - 161,564,515 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	162,346,710 - 163,627,371 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	169,420,475 - 170,392,593 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	169,420,480 - 170,392,581 (+)	Ensembl			panPan2	panpan1.1

TENM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	43,450,278 - 44,962,993 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	43,451,059 - 44,377,371 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	43,408,748 - 44,060,223 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	43,873,657 - 44,519,117 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	43,874,738 - 44,793,811 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	43,643,674 - 44,287,381 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	43,838,128 - 44,482,532 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	44,344,597 - 44,989,412 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tenm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	97,485,971 - 98,368,217 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936622	1,102,963 - 1,983,751 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936622	1,101,587 - 1,983,816 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TENM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	55,625,320 - 56,620,257 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	55,624,273 - 59,084,150 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	60,189,355 - 61,223,392 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TENM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	69,206,076 - 70,487,159 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666034	8,199,738 - 9,519,849 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tenm2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	21,732,787 - 22,627,526 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624733	21,732,997 - 22,921,889 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tenm2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	19,196,203 - 20,131,640 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tenm2
8939 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	302
Count of miRNA genes:	115
Interacting mature miRNAs:	125
Transcripts:	ENSRNOT00000011922, ENSRNOT00000068312
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631564	Apr3	Acute phase response QTL 3	3.9		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	10	15776754	60776754	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5893811	50893811	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5893811	50893811	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	14653541	59653541	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15533012	73695498	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6877142	51877142	Rat
2293680	Bss40	Bone structure and strength QTL 40	5.66	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	10	1	35730538	Rat
7387235	Uae41	Urinary albumin excretion QTL 41	5.26	0.1874	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	10	1	30004247	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	19939207	64939207	Rat
61332	Eau3	Experimental allergic uveoretinitis QTL 3		0.004	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	18035782	63035782	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	922197	45922197	Rat
2317754	Glom25	Glomerulus QTL 25	3.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	2103708	47103708	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5893811	50893811	Rat
2298495	Eae23	Experimental allergic encephalomyelitis QTL 23	16.93		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis duration (CMO:0001424)	10	16175525	61175525	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	10	18668419	63668419	Rat
2313087	Bmd80	Bone mineral density QTL 80	3.2	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	10	20110614	65110614	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38832698	Rat
1581497	Esta1	Estrogen-induced thymic atrophy QTL 1			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	21833758	61843633	Rat
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
631660	Hcar1	Hepatocarcinoma resistance QTL 1	3.4	0.0001	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	10	6661118	35509383	Rat
631532	Cm50	Cardiac mass QTL 50	6.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	18035782	63035782	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14991535	86964295	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
2313055	Bw96	Body weight QTL 96	3.6	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	10	20110614	65110614	Rat

Markers in Region

D10Mit5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	10	21,523,906 - 21,524,070	NCBI	Rnor6.0
Rnor_5.0	10	21,392,295 - 21,392,459	UniSTS	Rnor5.0
RGSC_v3.4	10	21,607,719 - 21,607,865	RGD	RGSC3.4
RGSC_v3.4	10	21,607,720 - 21,607,865	UniSTS	RGSC3.4
RGSC_v3.1	10	21,608,769 - 21,608,914	RGD
RH 3.4 Map	10	240.41	UniSTS
RH 3.4 Map	10	240.41	RGD
RH 2.0 Map	10	246.1	RGD
Cytogenetic Map	10	q12	UniSTS

D10Rat42

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	21,833,758 - 21,833,887 (+)	Marker Load Pipeline
mRatBN7.2	10	21,329,805 - 21,330,072 (+)	MAPPER	mRatBN7.2
mRatBN7.2	10	21,329,805 - 21,329,934 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	21,707,766 - 21,708,067	NCBI	Rnor6.0
Rnor_6.0	10	21,707,766 - 21,707,894	NCBI	Rnor6.0
Rnor_5.0	10	21,575,051 - 21,575,352	UniSTS	Rnor5.0
Rnor_5.0	10	21,575,051 - 21,575,179	UniSTS	Rnor5.0
RH 3.4 Map	10	240.11	RGD
RH 3.4 Map	10	240.11	UniSTS
RH 2.0 Map	10	251.9	RGD
SHRSP x BN Map	10	27.23	RGD
FHH x ACI Map	10	15.2	RGD
Cytogenetic Map	10	q12	UniSTS

D10Rat75

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	21,280,441 - 21,280,573 (+)	Marker Load Pipeline
mRatBN7.2	10	20,776,430 - 20,776,562 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	21,140,054 - 21,140,185	NCBI	Rnor6.0
Rnor_5.0	10	21,008,287 - 21,008,418	UniSTS	Rnor5.0
RGSC_v3.4	10	21,235,991 - 21,236,123	RGD	RGSC3.4
RGSC_v3.4	10	21,235,992 - 21,236,123	UniSTS	RGSC3.4
Celera	10	20,395,511 - 20,395,642	UniSTS
RGSC_v3.1	10	21,237,040 - 21,237,172	RGD
SHRSP x BN Map	10	26.1499	UniSTS
SHRSP x BN Map	10	26.1499	RGD
Cytogenetic Map	10	q12	UniSTS

D10Rat179

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	10	21,236,996 - 21,237,161	NCBI	Rnor6.0
Rnor_5.0	10	21,105,195 - 21,105,360	UniSTS	Rnor5.0
RGSC_v3.4	10	21,332,818 - 21,333,025	RGD	RGSC3.4
RGSC_v3.4	10	21,332,819 - 21,333,025	UniSTS	RGSC3.4
Celera	10	20,491,739 - 20,491,934	UniSTS
RGSC_v3.1	10	21,333,867 - 21,334,074	RGD
SHRSP x BN Map	10	27.31	UniSTS
SHRSP x BN Map	10	27.31	RGD
Cytogenetic Map	10	q12	UniSTS

D11Mit232

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	20,526,569 - 20,526,750 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	20,890,843 - 20,891,023	NCBI	Rnor6.0
Rnor_5.0	10	20,761,210 - 20,761,390	UniSTS	Rnor5.0
RGSC_v3.4	10	20,983,922 - 20,984,102	UniSTS	RGSC3.4
Celera	10	20,146,552 - 20,146,719	UniSTS
Cytogenetic Map	10	q12	UniSTS

BE102452

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	20,499,028 - 20,499,194 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	20,863,306 - 20,863,471	NCBI	Rnor6.0
Rnor_5.0	10	20,733,673 - 20,733,838	UniSTS	Rnor5.0
RGSC_v3.4	10	20,956,384 - 20,956,549	UniSTS	RGSC3.4
Celera	10	20,119,074 - 20,119,239	UniSTS
RH 3.4 Map	10	214.33	UniSTS
Cytogenetic Map	10	q12	UniSTS

RH138576

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	20,481,529 - 20,481,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	20,845,767 - 20,845,963	NCBI	Rnor6.0
Rnor_5.0	10	20,716,134 - 20,716,330	UniSTS	Rnor5.0
RGSC_v3.4	10	20,938,883 - 20,939,079	UniSTS	RGSC3.4
Celera	10	20,101,577 - 20,101,773	UniSTS
RH 3.4 Map	10	215.72	UniSTS
Cytogenetic Map	10	q12	UniSTS

D3Bwg1534e

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	20,481,842 - 20,482,055 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	20,846,080 - 20,846,292	NCBI	Rnor6.0
Rnor_5.0	10	20,716,447 - 20,716,659	UniSTS	Rnor5.0
RGSC_v3.4	10	20,939,196 - 20,939,408	UniSTS	RGSC3.4
Celera	10	20,101,890 - 20,102,102	UniSTS
Cytogenetic Map	10	q12	UniSTS

RH144521

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	21,139,330 - 21,139,514 (+)	Marker Load Pipeline
mRatBN7.2	10	20,635,298 - 20,635,482 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	22,105,801 - 22,105,984	NCBI	Rnor6.0
Rnor_6.0	10	20,998,936 - 20,999,119	NCBI	Rnor6.0
Rnor_5.0	10	20,866,384 - 20,866,567	UniSTS	Rnor5.0
Rnor_5.0	10	21,971,053 - 21,971,236	UniSTS	Rnor5.0
RGSC_v3.4	10	21,093,062 - 21,093,245	UniSTS	RGSC3.4
Celera	10	20,254,868 - 20,255,051	UniSTS
RH 3.4 Map	10	241.11	UniSTS
Cytogenetic Map	10	q12	UniSTS

BE096193

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	21,131,025 - 21,131,224 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	21,507,177 - 21,507,375	NCBI	Rnor6.0
Rnor_5.0	10	21,375,566 - 21,375,764	UniSTS	Rnor5.0
RGSC_v3.4	10	21,591,079 - 21,591,277	UniSTS	RGSC3.4
Celera	10	20,748,252 - 20,748,450	UniSTS
RH 3.4 Map	10	239.4	UniSTS
Cytogenetic Map	10	q12	UniSTS

AI501498

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	20,949,883 - 20,950,071 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	21,314,944 - 21,315,131	NCBI	Rnor6.0
Rnor_5.0	10	21,182,663 - 21,182,850	UniSTS	Rnor5.0
RGSC_v3.4	10	21,410,540 - 21,410,727	UniSTS	RGSC3.4
Celera	10	20,568,102 - 20,568,289	UniSTS
RH 3.4 Map	10	235.7	UniSTS
Cytogenetic Map	10	q12	UniSTS

AW529537

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	21,044,921 - 21,045,131 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	21,420,490 - 21,420,699	NCBI	Rnor6.0
Rnor_5.0	10	21,287,635 - 21,287,844	UniSTS	Rnor5.0
Celera	10	20,662,181 - 20,662,390	UniSTS
RH 3.4 Map	10	241.7	UniSTS
Cytogenetic Map	10	q12	UniSTS

AU049925

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	21,330,407 - 21,330,599 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	21,708,541 - 21,708,732	NCBI	Rnor6.0
Rnor_5.0	10	21,575,826 - 21,576,017	UniSTS	Rnor5.0
RGSC_v3.4	10	21,791,994 - 21,792,185	UniSTS	RGSC3.4
Celera	10	20,947,151 - 20,947,312	UniSTS
Cytogenetic Map	10	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
13	11	54	154	87	86	55	73	55	6	307	159	11	133	72	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_020088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF086607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF086608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF086609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF086610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011922 ⟹ ENSRNOP00000011922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 22,209,267 (-)	Ensembl
mRatBN7.2 Ensembl	10	20,481,854 - 21,705,597 (-)	Ensembl
Rnor_6.0 Ensembl	10	20,844,899 - 21,265,026 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097791 ⟹ ENSRNOP00000077386

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 22,447,611 (-)	Ensembl
mRatBN7.2 Ensembl	10	20,481,854 - 21,705,597 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000132901 ⟹ ENSRNOP00000112023

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 21,657,059 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000146782 ⟹ ENSRNOP00000108300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 21,279,676 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148979 ⟹ ENSRNOP00000104235

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 21,504,448 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000155762 ⟹ ENSRNOP00000108449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 21,657,234 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000163837 ⟹ ENSRNOP00000110648

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 21,279,434 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171102 ⟹ ENSRNOP00000109718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 22,121,000 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000173444 ⟹ ENSRNOP00000099251

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	20,985,902 - 22,209,267 (-)	Ensembl

RefSeq Acc Id:

NM_020088 ⟹ NP_064473

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,985,902 - 22,120,940 (-)	NCBI
mRatBN7.2	10	20,481,854 - 21,617,003 (-)	NCBI
Rnor_6.0	10	20,846,091 - 21,791,771 (-)	NCBI
Rnor_5.0	10	20,716,458 - 21,659,087 (-)	NCBI
RGSC_v3.4	10	20,939,207 - 21,888,443 (-)	RGD
Celera	10	20,101,901 - 21,233,134 (-)	RGD

Sequence:

show sequence

GTGAGCATTCCCGGAAACGCAGCTGAGTTGTTGGACAACAGACGTCCACCCAGTCGGTGGGTAA
AGTGACAGGTGCCACAACTCCAGCCTCCCCTTTTCTGAAAGTCGCGGAGTTCCATTTCATCTGC
AATAATGGATGTGAAGGATCGGCGACATCGCTCTTTGACCAGGGGACGGTGTGGCAAGGAGTGT
CGCTACACCAGCTCCTCTCTGGACAGTGAGGACTGCCGTGTGCCCACGCAGAAGTCCTACAGTT
CCAGTGAGACCCTGAAGGCTTATGACCATGACAGCAGAATGCACTATGGAAACCGAGTCACAGA
CCTGGTGCACCGGGAGTCCGATGAGTTTTCTAGACAAGGGGCTAATTTCACCCTGGCAGAATTG
GGAATCTGCGAGCCCTCCCCACACCGAAGTGGTTACTGTTCCGACATGGGGATCCTCCACCAGG
GCTACTCCCTGAGCACTGGGTCTGATGCGGACTCGGACACCGAGGGAGGGATGTCTCCAGAACA
TGCCATCAGACTGTGGGGACGAGGGATAAAATCGAGGCGCAGCTCTGGCTTGTCCAGCCGCGAG
AACTCAGCCCTTACTCTGACTGATTCTGACAATGAAAATAAATCGGATGACGACAATGGTCGAC
CCATTCCACCTACATCCTCGTCTAGCCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCC
TCCACCAGTTAGCTGCCAGATGCCATTGCTAGACAGCAACACCTCCCATCAGATCATGGACACC
AACCCCGATGAGGAATTCTCCCCTAATTCATACCTGCTCAGAGCATGCTCAGGGCCCCAGCAAG
CCTCCAGTAGTGGCCCTCCGAACCACCACAGCCAGTCAACGCTGAGGCCCCCTCTGCCACCTCC
TCATAACCACACCCTGTCCCACCACCACTCCTCTGCCAACTCCCTCAACAGAAACTCACTGACC
AATCGGCGGAGTCAAATCCACGCCCCAGCTCCTGCACCCAATGACCTGGCCACCACGCCGGAGT
CCGTTCAGCTCCAGGACAGCTGGGTGCTGAACAGTAACGTGCCGCTGGAGACGCGGCACTTCCT
CTTCAAGACGTCCTCCGGAAGCACACCCCTGTTCAGCAGCTCTTCTCCAGGATACCCCTTGACC
TCAGGGACCGTTTATACACCACCACCCCGCCTGCTGCCACGGAATACATTCTCTAGGAAGGCCT
TCAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAAATGCGCCGCCCTGTCTGCCATTGCCGC
TGCCCTCCTTCTGGCCATTTTGCTGGCCTATTTCATAGCAATGCATCTGCTCGGACTCAATTGG
CAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGACCGGCTTACCAGGAAACG
ATGATGTGGCAACAGTGCCATCTGGAGGCAAAGTGCCCTGGTCGTTGAAAAACAGCAGCATAGA
CAGCGGCGAGGCAGAAGTCGGTCGACGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGG
TCCCAGATTCACATCAGTCAGCCTCAGTTCTTAAAGTTCAACATCTCCCTGGGGAAGGATGCCC
TCTTCGGCGTCTACATAAGAAGAGGACTGCCACCATCTCATGCACAGTATGACTTCATGGAACG
CCTGGACGGAAAGGAGAAGTGGAGTGTGGTCGAGTCACCCAGGGAACGCCGGAGCATCCAGACC
CTGGTGCAGAACGAGGCTGTGTTCGTGCAGTACTTGGATGTGGGCCTGTGGCACCTCGCCTTCT
ACAATGACGGCAAGGACAAGGAGATGGTCTCCTTCAATACGGTTGTCTTAGATTCAGTGCAGGA
CTGTCCACGAAACTGCCACGGGAACGGCGAATGCGTGTCTGGACTGTGTCACTGTTTCCCAGGA
TTCCTAGGTGCAGACTGCGCTAAAGCTGCCTGCCCTGTTCTGTGCAGTGGGAATGGACAGTATT
CCAAAGGGACATGCCAGTGCTACAGTGGCTGGAAAGGAGCAGAATGCGATGTGCCCATGAACCA
GTGCATCGATCCTTCCTGTGGGGGCCACGGCTCCTGCATTGATGGGAACTGCGTGTGTGCAGCT
GGCTACAAGGGCGAGCACTGCGAAGAAGTGGATTGCTTGGATCCAACCTGCTCCAGCCATGGTG
TCTGTGTGAACGGAGAGTGTCTATGCAGCCCCGGCTGGGGCGGGCTCAACTGCGAGCTGGCGAG
GGTCCAGTGCCCAGACCAGTGTAGTGGGCATGGCACTTACCTCCCTGACTCTGGCCTCTGCAAC
TGTGATCCGAATTGGATGGGTCCCGACTGCTCTGTTGAAGTGTGCTCAGTAGACTGTGGCACTC
ACGGCGTCTGCATCGGGGGAGCCTGCCGCTGTGAAGAGGGCTGGACAGGCGCGGCTTGTGACCA
GCGCGTGTGCCACCCCCGCTGCATTGAGCACGGGACCTGTAAAGATGGCAAATGTGAATGCCGA
GAGGGCTGGAATGGTGAACACTGCACCATTGATGGCTGCCCTGATTTGTGCAACGGTAACGGGA
GATGCACACTGGGTCAGAACAGCTGGCAGTGTGTCTGCCAGACCGGCTGGAGAGGGCCCGGATG
CAACGTTGCCATGGAAACCTCCTGCGCTGATAACAAGGATAATGAGGGAGATGGCCTGGTGGAC
TGCCTGGACCCTGACTGCTGCCTCCAGTCAGCCTGTCAGAACAGCCTGCTCTGTCGGGGGTCTC
GGGACCCCTTGGACATCATTCAGCAAGGCCAGACAGACTGGCCTGCGGTGAAGTCCTTCTATGA
TCGTATCAAGCTCTTGGCAGGCAAGGACAGCACCCACATCATTCCTGGAGACAACCCCTTCAAT
AGCAGCCTGGTGTCTCTGATCCGAGGCCAAGTAGTAACCACGGATGGGACCCCCCTGGTGGGTG
TGAATGTGTCTTTTGTCAAGTACCCAAAATATGGCTACACCATCACTCGCCAGGACGGCACGTT
TGACCTGATTGCCAATGGGGGCTCTGCCTTGACTCTTCACTTTGAGCGAGCCCCTTTCATGAGC
CGGGAGCGCACAGTATGGCCGCCGTGGAACAGCTTCTATGCCATGGACACCCTGGTAATGAAGA
CGGAGGAGAACTCCATCCCCAGCTGTGACCTCAGTGGCTTTGTCCGGCCTGATCCGATCATCAT
CTCCTCTCCTCTGTCCACCTTCTTCAGCGCTTCCCCTGCGGCGAACCCCATTGTGCCTGAGACC
CAGGTTCTTCATGAGGAGATCGAGCTCCCTGGCACCAACGTGAAGCTCCGTTACCTCAGCTCCA
GAACAGCAGGGTACAAGTCACTGCTGAAGATCACCATGACCCAGTCCACGGTGCCCTTGAACCT
CATCCGGGTTCACTTGATGGTTGCCGTGGAGGGGCATCTCTTCCAGAAGTCGTTCCAGGCTTCT
CCCAACCTGGCCTACACATTCATCTGGGACAAGACAGACGCTTATGGCCAAAGGGTTTATGGCC
TATCGGATGCTGTTGTGTCTGTTGGATTTGAATATGAGACCTGCCCCAGTCTCATCCTGTGGGA
AAAAAGGACAGCCCTACTTCAAGGATTCGAGCTGGACCCTTCCAACCTTGGTGGCTGGTCCCTG
GATAAGCACCACACCCTCAATGTGAAAAGCGGAATACTACTCAAAGGCACAGGGGAGAACCAGT
TCCTGACCCAGCAGCCCGCCATCATCACCAGCATCATGGGTAACGGTCGCCGCAGAAGCATCTC
CTGTCCCAGCTGCAATGGCCTTGCTGAAGGCAACAAACTGTTGGCCCCCGTGGCCCTGGCTGTG
GGGATCGATGGGAGCCTCTTTGTCGGTGACTTCAATTATATCCGGCGCATCTTCCCTTCTCGAA
ACGTGACCAGTATCTTGGAGTTACGAAATAAAGAGTTTAAACATAGCAACAGCCCAGGACACAA
GTACTACTTGGCTGTGGACCCTGTGACTGGCTCGCTCTATGTCTCTGACACCAACAGTCGCCGG
ATCTACCGAGTCAAGTCTCTAAGCGGAGCCAAAGACCTGGCTGGGAATTCGGAAGTTGTGGCCG
GGACTGGCGAACAATGTCTACCCTTTGATGAAGCCCGCTGTGGGGATGGCGGGAAGGCTGTGGA
TGCCACCCTGATGAGCCCTAGAGGTATTGCAGTAGACAAGAACGGGCTTATGTATTTTGTTGAT
GCCACCATGATCCGGAAGGTCGACCAAAATGGAATCATCTCCACCCTGCTGGGCTCCAATGACC
TCACAGCTGTCCGACCACTGAGCTGTGACTCTAGCATGGACGTGGCCCAGGTCCGTCTAGAATG
GCCGACAGACCTTGCGGTCAACCCCATGGACAATTCCCTGTACGTCCTGGAGAACAACGTCATC
CTGCGGATCACCGAGAATCACCAGGTCAGCATCATCGCGGGACGGCCCATGCACTGCCAGGTTC
CCGGCATCGACTACTCGCTCAGCAAGCTCGCCATCCACTCTGCTCTGGAGTCAGCCAGCGCCAT
CGCCATTTCTCACACCGGGGTGCTCTACATCACCGAGACGGACGAGAAGAAGATCAACCGCCTA
CGCCAGGTCACCACCAACGGAGAGATCTGCCTCTTAGCCGGGGCAGCCTCAGACTGTGACTGCA
AAAATGACGTCAACTGCATCTGCTATTCGGGAGATGACGCATACGCCACGGATGCCATCTTGAA
CTCCCCGTCCTCCTTAGCTGTGGCTCCGGATGGCACCATCTACATCGCAGACCTCGGGAATATC
CGGATCAGGGCGGTCAGCAAAAACAAACCTGTTCTTAACGCGTTCAACCAGTATGAGGCTGCGT
CTCCGGGAGAACAGGAACTGTACGTGTTCAACGCCGATGGTATCCATCAGTACACCGTGAGCCT
GGTGACCGGGGAGTACTTATACAATTTCACCTACAGCGCTGACAATGATGTCACCGAGTTGATT
GACAACAACGGGAATTCCCTAAAGATCCGCCGGGACAGCAGTGGCATGCCCCGACACCTGCTCA
TGCCTGATAATCAGATCATCACCCTTACGGTGGGCACCAACGGAGGCCTCAAAGCCGTGTCAAC
GCAGAACCTGGAGCTGGGCCTCATGACTTATGATGGGAACACTGGACTCCTAGCCACCAAGAGC
GATGAAACCGGATGGACAACTTTTTATGACTATGACCACGAGGGCCGTCTGACCAATGTGACTC
GCCCCACGGGGGTGGTGACCAGCCTGCACCGGGAAATGGAGAAATCCATCACCGTTGACATTGA
GAACTCCAACCGTGATAACGATGTCACTGTGATTACCAACCTCTCTTCAGTGGAGGCCTCCTAC
ACCGTGGTACAAGATCAAGTGCGGAACAGCTACCAGCTCTGCAGCAACGGGACCCTGCGCGTCA
TGTACGCCAACGGCATGGGCGTCAGCTTCCACAGCGAGCCCCACGTCCTCGCAGGCACCCTCAC
CCCCACCATCGGGCGCTGTAACATCTCCCTGCCCATGGAGAACGGCCTGAACTCCATCGAGTGG
CGCCTGAGGAAGGAACAGATTAAAGGCAAAGTCACCATCTTTGGGAGGAAGCTTCGGGTCCACG
GAAGGAACCTCCTGTCCATTGATTATGACCGAAATATCCGCACTGAGAAGATCTATGACGACCA
CCGGAAGTTCACCCTGAGGATCATTTATGACCAGGTGGGCCGCCCCTTCCTGTGGCTCCCCAGC
AGTGGACTGGCGGCCGTCAATGTCTCCTACTTCTTCAACGGGCGCCTGGCCGGCCTCCAGCGCG
GGGCCATGAGCGAGAGGACAGACATTGACAAGCAAGGCCGGATTGTGTCCCGAATGTTCGCCGA
CGGGAAAGTCTGGAGCTATTCCTACCTTGACAAGTCCATGGTCCTCCTGCTGCAGAGCCAGCGT
CAGTACATATTTGAATATGACTCCTCTGACCGCCTCCACGCAGTCACCATGCCCAGTGTCGCCC
GGCACAGCATGTCCACGCACACCTCCATTGGCTACATCCGGAACATTTACAACCCACCGGAAAG
CAACGCCTCGGTCATCTTTGACTACAGTGATGACGGCCGCATCCTGAAGACGTCTTTCCTGGGC
ACCGGGCGCCAGGTGTTCTATAAGTACGGAAAACTGTCCAAGTTATCGGAGATCGTCTACGACA
GCACTGCCGTCACCTTCGGCTATGACGAGACCACTGGCGTCCTGAAGATGGTGAATCTCCAAAG
CGGGGGCTTCTCCTGTACCATCAGGTACCGAAAGGTCGGGCCCCTCGTGGACAAGCAGATTTAC
AGGTTCTCTGAGGAAGGCATGATCAACGCCAGGTTCGATTACACCTACCACGACAACAGCTTCC
GCATCGCCAGCATCAAGCCCGTCATCAGTGAGACTCCCCTTCCCGTTGACCTCTACCGCTACGA
TGAGATTTCTGGCAAGGTGGAACACTTCGGCAAGTTCGGGGTCATCTACTACGACATCAACCAG
ATCATCACCACTGCCGTCATGACACTCAGCAAGCACTTTGACACCCATGGGCGCATCAAGGAAG
TGCAGTATGAGATGTTCCGGTCCCTCATGTACTGGATGACGGTGCAATATGACAGTATGGGCAG
GGTCATCAAGAGGGAACTGAAACTGGGGCCCTATGCCAACACCACAAAGTACACCTATGACTAC
GACGGGGACGGCCAGCTCCAGAGTGTGGCCGTCAATGACCGGCCTACCTGGCGTTATAGCTATG
ACCTCAATGGGAACCTGCACCTGCTAAACCCAGGAAACAGTGCTCGCCTCATGCCGTTACGCTA
TGACCTCCGTGACCGGATAACCAGGCTAGGGGACGTGCAGTACAAAATCGATGATGATGGCTAT
TTATGCCAGAGAGGATCTGACATCTTTGAATACAACTCCAAGGGCCTTCTAACGAGAGCGTACA
ACAAGGCCAGCGGGTGGAGTGTGCAGTACCGCTATGATGGCGTGAGCCGCCGGGCTTCCTACAA
GACCAACCTGGGCCACCACCTACAGTACTTCTATTCCGACCTCCACCACCCCACACGTATCACC
CATGTTTACAACCACTCCAACTCTGAGATCACCTCACTCTACTATGACCTCCAGGGCCACCTCT
TTGCCATGGAGAGCAGTAGTGGGGAAGAGTACTATGTTGCCTCAGATAACACCGGGACTCCTCT
GGCTGTTTTTAGTATCAATGGCCTCATGATCAAGCAACTCCAATACACAGCCTATGGGGAGATT
TACTATGACTCCAATCCAGACTTTCAGATGGTCATCGGCTTCCACGGAGGCCTCTACGACCCCC
TCACCAAGCTCGTTCACTTTACGCAGCGTGATTATGACGTGCTGGCAGGACGGTGGACGTCCCC
CGACTACACCATGTGGAGGAATGTGGGCAAGGAGCCAGCCCCCTTCAACCTGTACATGTTCAAG
AACAACAATCCACTCAGTAATGAGCTGGATTTAAAGAACTACGTGACAGACGTGAAGAGCTGGC
TCGTGATGTTTGGATTTCAGCTCAGCAACATCATTCCTGGATTCCCAAGAGCCAAAATGTATTT
TGTGCCTCCCCCCTATGAACTGTCAGAGAGCCAAGCAAGTGAGAATGGACAGCTCATTACAGGT
GTCCAGCAGACAACAGAGAGGCATAACCAGGCCTTTCTGGCTCTAGAAGGACAGGTCATCTCTA
AAAAGCTCCATGCAGGCATCCGAGAGAAAGCAGGCCACTGGTTTGCTACGACCACGCCCATCAT
CGGCAAAGGCATCATGTTCGCCATCAAAGAAGGGCGGGTGACCACAGGCGTGTCTAGCATCGCC
AGTGAGGACAGCCGCAAGGTAGCATCCGTGTTGAACAACGCCTACTACTTGGACAAGATGCACT
ACAGCATCGAGGGCAAGGACACACACTACTTCGTGAAGATCGGTGCAGCGGACGGTGACCTGGT
TACGCTGGGGACCACCATTGGGCGCAAGGTGCTGGAGAGCGGGGTGAACGTGACCGTGTCACAG
CCCACGCTGCTGGTGAACGGCAGGACTCGAAGGTTCACCAACATTGAATTCCAGTACTCCACGC
TGCTGCTCAGCATACGCTACGGCCTCACCCCCGACACACTGGATGAAGAGAAGGCCCGCGTCCT
GGACCAAGCGCGACAGAGGGCCCTGGGTACTGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGAC
GGGAGAGAGGGCAGCCGTCTGTGGACGGAGGGCGAGAAGCAGCAACTCCTGAGCACGGGACGGG
TGCAAGGTTATGAGGGCTATTACGTGCTTCCGGTGGAACAGTACCCAGAGCTGGCAGACAGTAG
CAGCAACATCCAGTTCTTAAGACAGAATGAGATGGGAAAGAGGTAACAAAATAACCTGCTGCCA
CCTCTTCTCTGGGTGGCTCAGCAGGAGCAACTGTGACCTCCTCTCCTAAGGAGACGAAGACCTA
ACAGGGGCACTGAGGCCGGGCTGCTTTAGGACCCCAAGTGGCAAGAAAGCTCACATTTTTTGAG
TTCAAATGCTACTGTCCAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCTCGGCCACAAA
TTCTGAGGAAAACAAAACTAAAGGATGAACGAATGAACCAACGAACGAA

hide sequence

RefSeq Acc Id:

XM_039085063 ⟹ XP_038940991

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,706,415 (-)	NCBI

RefSeq Acc Id:

XM_039085066 ⟹ XP_038940994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,705,812 (-)	NCBI

RefSeq Acc Id:

XM_039085068 ⟹ XP_038940996

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,705,812 (-)	NCBI

RefSeq Acc Id:

XM_039085069 ⟹ XP_038940997

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,705,812 (-)	NCBI

RefSeq Acc Id:

XM_039085070 ⟹ XP_038940998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,705,812 (-)	NCBI

RefSeq Acc Id:

XM_039085071 ⟹ XP_038940999

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,705,811 (-)	NCBI

RefSeq Acc Id:

XM_039085072 ⟹ XP_038941000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 21,667,732 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,163,766 (-)	NCBI

RefSeq Acc Id:

XM_039085074 ⟹ XP_038941002

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 21,419,039 (-)	NCBI
mRatBN7.2	10	20,482,113 - 20,905,100 (-)	NCBI

RefSeq Acc Id:

XM_039085075 ⟹ XP_038941003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 21,419,039 (-)	NCBI
mRatBN7.2	10	20,482,113 - 20,905,100 (-)	NCBI

RefSeq Acc Id:

XM_039085076 ⟹ XP_038941004

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 21,667,733 (-)	NCBI
mRatBN7.2	10	20,482,113 - 21,163,766 (-)	NCBI

RefSeq Acc Id:

XM_063268319 ⟹ XP_063124389

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,001,337 (-)	NCBI

RefSeq Acc Id:

XM_063268320 ⟹ XP_063124390

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 22,121,001 (-)	NCBI

RefSeq Acc Id:

XM_063268321 ⟹ XP_063124391

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 21,667,733 (-)	NCBI

RefSeq Acc Id:

XM_063268322 ⟹ XP_063124392

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	20,984,710 - 21,667,732 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_064473	(Get FASTA)	NCBI Sequence Viewer
	XP_038940991	(Get FASTA)	NCBI Sequence Viewer
	XP_038940994	(Get FASTA)	NCBI Sequence Viewer
	XP_038940996	(Get FASTA)	NCBI Sequence Viewer
	XP_038940997	(Get FASTA)	NCBI Sequence Viewer
	XP_038940998	(Get FASTA)	NCBI Sequence Viewer
	XP_038940999	(Get FASTA)	NCBI Sequence Viewer
	XP_038941000	(Get FASTA)	NCBI Sequence Viewer
	XP_038941002	(Get FASTA)	NCBI Sequence Viewer
	XP_038941003	(Get FASTA)	NCBI Sequence Viewer
	XP_038941004	(Get FASTA)	NCBI Sequence Viewer
	XP_063124389	(Get FASTA)	NCBI Sequence Viewer
	XP_063124390	(Get FASTA)	NCBI Sequence Viewer
	XP_063124391	(Get FASTA)	NCBI Sequence Viewer
	XP_063124392	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD47383	(Get FASTA)	NCBI Sequence Viewer
	AAD47384	(Get FASTA)	NCBI Sequence Viewer
	AAD47385	(Get FASTA)	NCBI Sequence Viewer
	AAD47386	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011922
	ENSRNOP00000077386
	ENSRNOP00000099251
	ENSRNOP00000108300
	ENSRNOP00000109718
	ENSRNOP00000112023
GenBank Protein	Q9R1K2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_064473 ⟸ NM_020088

- UniProtKB:

A6HDJ4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDVKDRRHRSLTRGRCGKECRYTSSSLDSEDCRVPTQKSYSSSETLKAYDHDSRMHYGNRVTDL
VHRESDEFSRQGANFTLAELGICEPSPHRSGYCSDMGILHQGYSLSTGSDADSDTEGGMSPEHA
IRLWGRGIKSRRSSGLSSRENSALTLTDSDNENKSDDDNGRPIPPTSSSSLLPSAQLPSSHNPP
PVSCQMPLLDSNTSHQIMDTNPDEEFSPNSYLLRACSGPQQASSSGPPNHHSQSTLRPPLPPPH
NHTLSHHHSSANSLNRNSLTNRRSQIHAPAPAPNDLATTPESVQLQDSWVLNSNVPLETRHFLF
KTSSGSTPLFSSSSPGYPLTSGTVYTPPPRLLPRNTFSRKAFKLKKPSKYCSWKCAALSAIAAA
LLLAILLAYFIAMHLLGLNWQLQPADGHTFNNGVRTGLPGNDDVATVPSGGKVPWSLKNSSIDS
GEAEVGRRVTQEVPPGVFWRSQIHISQPQFLKFNISLGKDALFGVYIRRGLPPSHAQYDFMERL
DGKEKWSVVESPRERRSIQTLVQNEAVFVQYLDVGLWHLAFYNDGKDKEMVSFNTVVLDSVQDC
PRNCHGNGECVSGLCHCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWKGAECDVPMNQC
IDPSCGGHGSCIDGNCVCAAGYKGEHCEEVDCLDPTCSSHGVCVNGECLCSPGWGGLNCELARV
QCPDQCSGHGTYLPDSGLCNCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEEGWTGAACDQR
VCHPRCIEHGTCKDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCN
VAMETSCADNKDNEGDGLVDCLDPDCCLQSACQNSLLCRGSRDPLDIIQQGQTDWPAVKSFYDR
IKLLAGKDSTHIIPGDNPFNSSLVSLIRGQVVTTDGTPLVGVNVSFVKYPKYGYTITRQDGTFD
LIANGGSALTLHFERAPFMSRERTVWPPWNSFYAMDTLVMKTEENSIPSCDLSGFVRPDPIIIS
SPLSTFFSASPAANPIVPETQVLHEEIELPGTNVKLRYLSSRTAGYKSLLKITMTQSTVPLNLI
RVHLMVAVEGHLFQKSFQASPNLAYTFIWDKTDAYGQRVYGLSDAVVSVGFEYETCPSLILWEK
RTALLQGFELDPSNLGGWSLDKHHTLNVKSGILLKGTGENQFLTQQPAIITSIMGNGRRRSISC
PSCNGLAEGNKLLAPVALAVGIDGSLFVGDFNYIRRIFPSRNVTSILELRNKEFKHSNSPGHKY
YLAVDPVTGSLYVSDTNSRRIYRVKSLSGAKDLAGNSEVVAGTGEQCLPFDEARCGDGGKAVDA
TLMSPRGIAVDKNGLMYFVDATMIRKVDQNGIISTLLGSNDLTAVRPLSCDSSMDVAQVRLEWP
TDLAVNPMDNSLYVLENNVILRITENHQVSIIAGRPMHCQVPGIDYSLSKLAIHSALESASAIA
ISHTGVLYITETDEKKINRLRQVTTNGEICLLAGAASDCDCKNDVNCICYSGDDAYATDAILNS
PSSLAVAPDGTIYIADLGNIRIRAVSKNKPVLNAFNQYEAASPGEQELYVFNADGIHQYTVSLV
TGEYLYNFTYSADNDVTELIDNNGNSLKIRRDSSGMPRHLLMPDNQIITLTVGTNGGLKAVSTQ
NLELGLMTYDGNTGLLATKSDETGWTTFYDYDHEGRLTNVTRPTGVVTSLHREMEKSITVDIEN
SNRDNDVTVITNLSSVEASYTVVQDQVRNSYQLCSNGTLRVMYANGMGVSFHSEPHVLAGTLTP
TIGRCNISLPMENGLNSIEWRLRKEQIKGKVTIFGRKLRVHGRNLLSIDYDRNIRTEKIYDDHR
KFTLRIIYDQVGRPFLWLPSSGLAAVNVSYFFNGRLAGLQRGAMSERTDIDKQGRIVSRMFADG
KVWSYSYLDKSMVLLLQSQRQYIFEYDSSDRLHAVTMPSVARHSMSTHTSIGYIRNIYNPPESN
ASVIFDYSDDGRILKTSFLGTGRQVFYKYGKLSKLSEIVYDSTAVTFGYDETTGVLKMVNLQSG
GFSCTIRYRKVGPLVDKQIYRFSEEGMINARFDYTYHDNSFRIASIKPVISETPLPVDLYRYDE
ISGKVEHFGKFGVIYYDINQIITTAVMTLSKHFDTHGRIKEVQYEMFRSLMYWMTVQYDSMGRV
IKRELKLGPYANTTKYTYDYDGDGQLQSVAVNDRPTWRYSYDLNGNLHLLNPGNSARLMPLRYD
LRDRITRLGDVQYKIDDDGYLCQRGSDIFEYNSKGLLTRAYNKASGWSVQYRYDGVSRRASYKT
NLGHHLQYFYSDLHHPTRITHVYNHSNSEITSLYYDLQGHLFAMESSSGEEYYVASDNTGTPLA
VFSINGLMIKQLQYTAYGEIYYDSNPDFQMVIGFHGGLYDPLTKLVHFTQRDYDVLAGRWTSPD
YTMWRNVGKEPAPFNLYMFKNNNPLSNELDLKNYVTDVKSWLVMFGFQLSNIIPGFPRAKMYFV
PPPYELSESQASENGQLITGVQQTTERHNQAFLALEGQVISKKLHAGIREKAGHWFATTTPIIG
KGIMFAIKEGRVTTGVSSIASEDSRKVASVLNNAYYLDKMHYSIEGKDTHYFVKIGAADGDLVT
LGTTIGRKVLESGVNVTVSQPTLLVNGRTRRFTNIEFQYSTLLLSIRYGLTPDTLDEEKARVLD
QARQRALGTAWAKEQQKARDGREGSRLWTEGEKQQLLSTGRVQGYEGYYVLPVEQYPELADSSS
NIQFLRQNEMGKR

hide sequence

Ensembl Acc Id:

ENSRNOP00000011922 ⟸ ENSRNOT00000011922

RefSeq Acc Id:	XP_038940991 ⟸ XM_039085063
- Peptide Label:	isoform X1
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot), A0A096P6L6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038940998 ⟸ XM_039085070
- Peptide Label:	isoform X5
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940997 ⟸ XM_039085069
- Peptide Label:	isoform X4
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940996 ⟸ XM_039085068
- Peptide Label:	isoform X3
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940994 ⟸ XM_039085066
- Peptide Label:	isoform X2
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038940999 ⟸ XM_039085071
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5Y1H9 (UniProtKB/TrEMBL), A6HDJ4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038941004 ⟸ XM_039085076
- Peptide Label:	isoform X12
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038941000 ⟸ XM_039085072
- Peptide Label:	isoform X8
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038941003 ⟸ XM_039085075
- Peptide Label:	isoform X11
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038941002 ⟸ XM_039085074
- Peptide Label:	isoform X9
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

Ensembl Acc Id:

ENSRNOP00000077386 ⟸ ENSRNOT00000097791

RefSeq Acc Id:	XP_063124390 ⟸ XM_063268320
- Peptide Label:	isoform X7
- UniProtKB:	A6HDJ4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124389 ⟸ XM_063268319
- Peptide Label:	isoform X1
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot), A0A096P6L6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124391 ⟸ XM_063268321
- Peptide Label:	isoform X10
- UniProtKB:	Q9R1K2 (UniProtKB/Swiss-Prot), Q9R1K1 (UniProtKB/Swiss-Prot), Q9R1K0 (UniProtKB/Swiss-Prot), Q9R1J9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063124392 ⟸ XM_063268322
- Peptide Label:	isoform X13
- UniProtKB:	A6HDJ4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000104235 ⟸ ENSRNOT00000148979

Ensembl Acc Id:

ENSRNOP00000108300 ⟸ ENSRNOT00000146782

Ensembl Acc Id:

ENSRNOP00000099251 ⟸ ENSRNOT00000173444

Ensembl Acc Id:

ENSRNOP00000112023 ⟸ ENSRNOT00000132901

Ensembl Acc Id:

ENSRNOP00000110648 ⟸ ENSRNOT00000163837

Ensembl Acc Id:

ENSRNOP00000109718 ⟸ ENSRNOT00000171102

Ensembl Acc Id:

ENSRNOP00000108449 ⟸ ENSRNOT00000155762

Protein Domains

EGF-like Teneurin N-terminal

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727907	AgrOrtholog
BioCyc Gene	G2FUF-25535	BioCyc
Ensembl Genes	ENSRNOG00000027341	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000011922	ENTREZGENE
	ENSRNOT00000097791	ENTREZGENE
	ENSRNOT00000132901	ENTREZGENE
	ENSRNOT00000146782	ENTREZGENE
	ENSRNOT00000171102	ENTREZGENE
	ENSRNOT00000173444	ENTREZGENE
Gene3D-CATH	2.120.10.30	UniProtKB/Swiss-Prot
	Laminin	UniProtKB/Swiss-Prot
	RHS repeat-associated core	UniProtKB/Swiss-Prot
InterPro	6-blade_b-propeller_TolB-like	UniProtKB/Swiss-Prot
	CarboxyPept-like_regulatory	UniProtKB/Swiss-Prot
	EGF-like_Ca-bd_dom	UniProtKB/Swiss-Prot
	EGF-like_dom	UniProtKB/Swiss-Prot
	IPR006530	UniProtKB/Swiss-Prot
	Rhs_assc_core	UniProtKB/Swiss-Prot
	Ten_N	UniProtKB/Swiss-Prot
	TEN_NHL	UniProtKB/Swiss-Prot
	TEN_TTR-like	UniProtKB/Swiss-Prot
	TEN_YD-shell	UniProtKB/Swiss-Prot
	Teneurin_domain	UniProtKB/Swiss-Prot
	Tox-GHH_dom	UniProtKB/Swiss-Prot
KEGG Report	rno:117242	UniProtKB/Swiss-Prot
NCBI Gene	117242	ENTREZGENE
PANTHER	PTHR11219:SF8	UniProtKB/Swiss-Prot
	TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	UniProtKB/Swiss-Prot
Pfam	EGF_TEN	UniProtKB/Swiss-Prot
	FN-plug_TEN1-4	UniProtKB/Swiss-Prot
	GBD_Tenm3	UniProtKB/Swiss-Prot
	Ten_N	UniProtKB/Swiss-Prot
	TEN_NHL	UniProtKB/Swiss-Prot
	TEN_YD-shell	UniProtKB/Swiss-Prot
	Teneurin_ABD	UniProtKB/Swiss-Prot
	Tox-GHH	UniProtKB/Swiss-Prot
	TTR_TEN1-4	UniProtKB/Swiss-Prot
PhenoGen	Tenm2	PhenoGen
PROSITE	EGF_1	UniProtKB/Swiss-Prot
	EGF_2	UniProtKB/Swiss-Prot
	EGF_3	UniProtKB/Swiss-Prot
	TENEURIN_N	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000027341	RatGTEx
SMART	EGF	UniProtKB/Swiss-Prot
	EGF_CA	UniProtKB/Swiss-Prot
Superfamily-SCOP	DPP6 N-terminal domain-like	UniProtKB/Swiss-Prot
	NHL repeat	UniProtKB/Swiss-Prot
	SSF49464	UniProtKB/Swiss-Prot
UniProt	A0A096P6L6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y1H9	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LFZ9_RAT	UniProtKB/TrEMBL
	A0ABK0LGE7_RAT	UniProtKB/TrEMBL
	A0ABK0LIA7_RAT	UniProtKB/TrEMBL
	A0ABK0LT05_RAT	UniProtKB/TrEMBL
	A0ABK0LT23_RAT	UniProtKB/TrEMBL
	A0ABK0LUC4_RAT	UniProtKB/TrEMBL
	A0ABK0M3Y0_RAT	UniProtKB/TrEMBL
	A6HDJ4	ENTREZGENE, UniProtKB/TrEMBL
	Q9R1J9	ENTREZGENE
	Q9R1K0	ENTREZGENE
	Q9R1K1	ENTREZGENE
	Q9R1K2	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q9R1J9	UniProtKB/Swiss-Prot
	Q9R1K0	UniProtKB/Swiss-Prot
	Q9R1K1	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Tenm2	teneurin transmembrane protein 2	LOC102551468	teneurin-2-like	Data merged from RGD:7596091	737654	PROVISIONAL
2013-12-18	LOC102551468	teneurin-2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2012-10-11	Tenm2	teneurin transmembrane protein 2	Odz2	odz, odd Oz/ten-m homolog 2 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-09	Odz2	odz, odd Oz/ten-m homolog 2 (Drosophila)	Odz2	odd Oz/ten-m homolog 2 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-08	Odz2	odd Oz/ten-m homolog 2 (Drosophila)			Symbol and Name status set to approved	1299863	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in many types of neurons, including pyramidal cells in the cerebral cortex and tufted cells in the olfactory bulb during development	1299591

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD